| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is fabG [H]
Identifier: 91789390
GI number: 91789390
Start: 3738356
End: 3739180
Strand: Direct
Name: fabG [H]
Synonym: Bpro_3536
Alternate gene names: 91789390
Gene position: 3738356-3739180 (Clockwise)
Preceding gene: 91789389
Following gene: 91789391
Centisome position: 71.89
GC content: 63.39
Gene sequence:
>825_bases ATGAACACTCCAATGCCCGGCTCGTCTTCCGCCATTTCATTCGGACTGGCCGACCGTGTCTGTATTGTCACCGGCGGCGC TCAGGGCATTGGCGAGGCCTGCATCCGGCGCTTTGCGCGCGAACAGGCCAAGGTGGTCATTGCCGATATCGACGACGCCC GGGGCGCTGCGCTGGCCCGCGAAGTGGGCGGCCTGTATGTGCATTGCGATGTGGGCGACAAGGCTCAGGTCGATGCACTG GTGGCACAAACCATCGCCGCGCACGGCCGCATTGATGTGCTGGTAAACAACGCCGGCATTTTCAGGGCCGCCGATTTTCT GGAAATCACGGAAGCCGACTTCGACGCGGTGCTGCGCATCAACCTCAAAGGCTCGTTTCTGGTGGGCCAGGCGGTGGCGC GCGAAATGGCCAGAGCCGAAGCAAGACCAGGCATCGGCGGGTCCGCCTCGCGGGGCAGCATCGTCAACATGAGCTCCGTC AACAGCGTGCTCACAATTCCCACGATTGCCAGCTACAACGTGAGCAAGGGCGGCATCAACCAGCTCACGCGCGTGATGGC GCTGGCGCTGGCGGACAAAGGCATACGCGTCAATGCGGTCGCCCCTGGCACCATCGCCACCGACCTGGCCGCCAAGGCCG TGCTGACCAGTGAAGAGGCCAAAGCCCGCATCATGAGCCGCACGCCGATGAAGCGCCTGGGTGAACCCTCGGAAATTGCC GACACAGTGGCCTATCTGGCCAGCGATGCGGCCAGCTACATCACCGGCGAGATCGTGATGGTCGACGGCGGGCGGATGAC GCTGAATTACACCGTGTCGGTCTGA
Upstream 100 bases:
>100_bases TCGGCATCGGCTCGGCCCTGTACAAGCCGGGACTGGCAGCCGCCGACGTGGCGGAAAATGCCCTGAAATTCATGGCGGCG TGCGCTGGTACCATCCGGGC
Downstream 100 bases:
>100_bases AGGGCAAGTCCCGCTCGCGGCAGGTTTGCCGCGGGTCAGAGTCTGGCGGGCACAACAAACATTGAGGTTGGGCGAGTCGC CACGCTGCAAGAACCCGCTG
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MNTPMPGSSSAISFGLADRVCIVTGGAQGIGEACIRRFAREQAKVVIADIDDARGAALAREVGGLYVHCDVGDKAQVDAL VAQTIAAHGRIDVLVNNAGIFRAADFLEITEADFDAVLRINLKGSFLVGQAVAREMARAEARPGIGGSASRGSIVNMSSV NSVLTIPTIASYNVSKGGINQLTRVMALALADKGIRVNAVAPGTIATDLAAKAVLTSEEAKARIMSRTPMKRLGEPSEIA DTVAYLASDAASYITGEIVMVDGGRMTLNYTVSV
Sequences:
>Translated_274_residues MNTPMPGSSSAISFGLADRVCIVTGGAQGIGEACIRRFAREQAKVVIADIDDARGAALAREVGGLYVHCDVGDKAQVDAL VAQTIAAHGRIDVLVNNAGIFRAADFLEITEADFDAVLRINLKGSFLVGQAVAREMARAEARPGIGGSASRGSIVNMSSV NSVLTIPTIASYNVSKGGINQLTRVMALALADKGIRVNAVAPGTIATDLAAKAVLTSEEAKARIMSRTPMKRLGEPSEIA DTVAYLASDAASYITGEIVMVDGGRMTLNYTVSV >Mature_274_residues MNTPMPGSSSAISFGLADRVCIVTGGAQGIGEACIRRFAREQAKVVIADIDDARGAALAREVGGLYVHCDVGDKAQVDAL VAQTIAAHGRIDVLVNNAGIFRAADFLEITEADFDAVLRINLKGSFLVGQAVAREMARAEARPGIGGSASRGSIVNMSSV NSVLTIPTIASYNVSKGGINQLTRVMALALADKGIRVNAVAPGTIATDLAAKAVLTSEEAKARIMSRTPMKRLGEPSEIA DTVAYLASDAASYITGEIVMVDGGRMTLNYTVSV
Specific function: Catalyzes A Reversible Reduction Of 5-Ketoglutanate To Form D-Gluconate. Dependent On Nadp, Almost Inactive With NAD. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=259, Percent_Identity=38.2239382239382, Blast_Score=137, Evalue=1e-32, Organism=Homo sapiens, GI19923817, Length=280, Percent_Identity=31.7857142857143, Blast_Score=124, Evalue=9e-29, Organism=Homo sapiens, GI15277342, Length=256, Percent_Identity=35.546875, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI59889578, Length=235, Percent_Identity=31.4893617021277, Blast_Score=116, Evalue=2e-26, Organism=Homo sapiens, GI40254992, Length=251, Percent_Identity=34.6613545816733, Blast_Score=116, Evalue=3e-26, Organism=Homo sapiens, GI5031737, Length=258, Percent_Identity=34.4961240310078, Blast_Score=115, Evalue=4e-26, Organism=Homo sapiens, GI126723750, Length=259, Percent_Identity=33.2046332046332, Blast_Score=115, Evalue=4e-26, Organism=Homo sapiens, GI7705925, Length=250, Percent_Identity=32, Blast_Score=115, Evalue=5e-26, Organism=Homo sapiens, GI4758504, Length=255, Percent_Identity=35.6862745098039, Blast_Score=111, Evalue=9e-25, Organism=Homo sapiens, GI66933014, Length=253, Percent_Identity=33.201581027668, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI10190704, Length=259, Percent_Identity=30.1158301158301, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI83715985, Length=255, Percent_Identity=32.9411764705882, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI33667109, Length=201, Percent_Identity=34.3283582089552, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI126723191, Length=196, Percent_Identity=36.2244897959184, Blast_Score=88, Evalue=9e-18, Organism=Homo sapiens, GI31542939, Length=240, Percent_Identity=30.8333333333333, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI4503301, Length=206, Percent_Identity=26.2135922330097, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI4504505, Length=200, Percent_Identity=32, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI224922801, Length=177, Percent_Identity=31.0734463276836, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI109715829, Length=254, Percent_Identity=23.2283464566929, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI20149619, Length=240, Percent_Identity=25.4166666666667, Blast_Score=66, Evalue=4e-11, Organism=Escherichia coli, GI1790717, Length=259, Percent_Identity=35.9073359073359, Blast_Score=146, Evalue=2e-36, Organism=Escherichia coli, GI87082100, Length=277, Percent_Identity=38.9891696750903, Blast_Score=145, Evalue=4e-36, Organism=Escherichia coli, GI1789208, Length=259, Percent_Identity=32.8185328185328, Blast_Score=131, Evalue=5e-32, Organism=Escherichia coli, GI1788459, Length=257, Percent_Identity=33.852140077821, Blast_Score=129, Evalue=2e-31, Organism=Escherichia coli, GI1787335, Length=248, Percent_Identity=33.0645161290323, Blast_Score=124, Evalue=6e-30, Organism=Escherichia coli, GI1787905, Length=254, Percent_Identity=34.251968503937, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI2367175, Length=255, Percent_Identity=34.9019607843137, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI1789378, Length=274, Percent_Identity=33.5766423357664, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI87082160, Length=257, Percent_Identity=28.0155642023346, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI2367365, Length=248, Percent_Identity=31.4516129032258, Blast_Score=100, Evalue=7e-23, Organism=Escherichia coli, GI1786812, Length=250, Percent_Identity=30, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1789057, Length=267, Percent_Identity=28.4644194756554, Blast_Score=98, Evalue=5e-22, Organism=Escherichia coli, GI1787545, Length=252, Percent_Identity=28.1746031746032, Blast_Score=72, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17560676, Length=263, Percent_Identity=33.0798479087452, Blast_Score=135, Evalue=3e-32, Organism=Caenorhabditis elegans, GI25147288, Length=253, Percent_Identity=35.9683794466403, Blast_Score=132, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17555706, Length=257, Percent_Identity=35.408560311284, Blast_Score=125, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17561402, Length=258, Percent_Identity=34.8837209302326, Blast_Score=122, Evalue=2e-28, Organism=Caenorhabditis elegans, GI115534694, Length=254, Percent_Identity=31.1023622047244, Blast_Score=120, Evalue=5e-28, Organism=Caenorhabditis elegans, GI17559104, Length=269, Percent_Identity=33.0855018587361, Blast_Score=118, Evalue=4e-27, Organism=Caenorhabditis elegans, GI71994604, Length=261, Percent_Identity=30.6513409961686, Blast_Score=118, Evalue=4e-27, Organism=Caenorhabditis elegans, GI71994600, Length=267, Percent_Identity=29.9625468164794, Blast_Score=111, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17538182, Length=251, Percent_Identity=31.0756972111554, Blast_Score=108, Evalue=4e-24, Organism=Caenorhabditis elegans, GI17551412, Length=270, Percent_Identity=31.8518518518519, Blast_Score=107, Evalue=8e-24, Organism=Caenorhabditis elegans, GI17562910, Length=270, Percent_Identity=32.5925925925926, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17538480, Length=272, Percent_Identity=31.6176470588235, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17562906, Length=269, Percent_Identity=31.2267657992565, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17562908, Length=269, Percent_Identity=30.4832713754647, Blast_Score=100, Evalue=6e-22, Organism=Caenorhabditis elegans, GI193204405, Length=275, Percent_Identity=30.1818181818182, Blast_Score=100, Evalue=8e-22, Organism=Caenorhabditis elegans, GI17560332, Length=271, Percent_Identity=31.3653136531365, Blast_Score=96, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17536651, Length=265, Percent_Identity=28.6792452830189, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17544670, Length=297, Percent_Identity=27.2727272727273, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17531453, Length=271, Percent_Identity=29.8892988929889, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17560150, Length=268, Percent_Identity=31.7164179104478, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17562904, Length=271, Percent_Identity=30.9963099630996, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17536025, Length=268, Percent_Identity=28.7313432835821, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17565030, Length=267, Percent_Identity=31.0861423220974, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17562990, Length=259, Percent_Identity=32.4324324324324, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17538486, Length=270, Percent_Identity=27.7777777777778, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI72000259, Length=267, Percent_Identity=29.5880149812734, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17560220, Length=273, Percent_Identity=27.8388278388278, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17563726, Length=266, Percent_Identity=29.3233082706767, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17561272, Length=186, Percent_Identity=29.0322580645161, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17508651, Length=258, Percent_Identity=29.8449612403101, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17568967, Length=134, Percent_Identity=32.8358208955224, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17558994, Length=233, Percent_Identity=25.7510729613734, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17559962, Length=214, Percent_Identity=27.1028037383178, Blast_Score=64, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=259, Percent_Identity=29.3436293436293, Blast_Score=106, Evalue=4e-24, Organism=Saccharomyces cerevisiae, GI6322861, Length=258, Percent_Identity=27.5193798449612, Blast_Score=82, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6320089, Length=195, Percent_Identity=25.6410256410256, Blast_Score=62, Evalue=8e-11, Organism=Drosophila melanogaster, GI23397609, Length=257, Percent_Identity=36.1867704280156, Blast_Score=154, Evalue=5e-38, Organism=Drosophila melanogaster, GI21357041, Length=263, Percent_Identity=35.7414448669202, Blast_Score=146, Evalue=2e-35, Organism=Drosophila melanogaster, GI28571526, Length=263, Percent_Identity=34.9809885931559, Blast_Score=141, Evalue=4e-34, Organism=Drosophila melanogaster, GI24644339, Length=268, Percent_Identity=32.8358208955224, Blast_Score=139, Evalue=2e-33, Organism=Drosophila melanogaster, GI24639444, Length=253, Percent_Identity=35.1778656126482, Blast_Score=135, Evalue=3e-32, Organism=Drosophila melanogaster, GI21355319, Length=258, Percent_Identity=35.2713178294574, Blast_Score=119, Evalue=2e-27, Organism=Drosophila melanogaster, GI24644337, Length=204, Percent_Identity=32.843137254902, Blast_Score=113, Evalue=2e-25, Organism=Drosophila melanogaster, GI24643142, Length=263, Percent_Identity=30.4182509505703, Blast_Score=105, Evalue=5e-23, Organism=Drosophila melanogaster, GI17737361, Length=257, Percent_Identity=31.9066147859922, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI21358495, Length=209, Percent_Identity=28.2296650717703, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI18859837, Length=254, Percent_Identity=31.1023622047244, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI21357673, Length=229, Percent_Identity=28.82096069869, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI28571387, Length=215, Percent_Identity=25.5813953488372, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 28440; Mature: 28440
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTPMPGSSSAISFGLADRVCIVTGGAQGIGEACIRRFAREQAKVVIADIDDARGAALAR CCCCCCCCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHCCEEEEEECCCCCHHHHHH EVGGLYVHCDVGDKAQVDALVAQTIAAHGRIDVLVNNAGIFRAADFLEITEADFDAVLRI HHCCEEEEECCCCCHHHHHHHHHHHHHCCEEEEEEECCCCEEHHHHHHHHCCCCEEEEEE NLKGSFLVGQAVAREMARAEARPGIGGSASRGSIVNMSSVNSVLTIPTIASYNVSKGGIN ECCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCEEEECCEECCCCCCCCHH QLTRVMALALADKGIRVNAVAPGTIATDLAAKAVLTSEEAKARIMSRTPMKRLGEPSEIA HHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHCCCHHHHH DTVAYLASDAASYITGEIVMVDGGRMTLNYTVSV HHHHHHHHHHHHHHEEEEEEEECCEEEEEEEEEC >Mature Secondary Structure MNTPMPGSSSAISFGLADRVCIVTGGAQGIGEACIRRFAREQAKVVIADIDDARGAALAR CCCCCCCCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHCCEEEEEECCCCCHHHHHH EVGGLYVHCDVGDKAQVDALVAQTIAAHGRIDVLVNNAGIFRAADFLEITEADFDAVLRI HHCCEEEEECCCCCHHHHHHHHHHHHHCCEEEEEEECCCCEEHHHHHHHHCCCCEEEEEE NLKGSFLVGQAVAREMARAEARPGIGGSASRGSIVNMSSVNSVLTIPTIASYNVSKGGIN ECCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCEEEECCEECCCCCCCCHH QLTRVMALALADKGIRVNAVAPGTIATDLAAKAVLTSEEAKARIMSRTPMKRLGEPSEIA HHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHCCCHHHHH DTVAYLASDAASYITGEIVMVDGGRMTLNYTVSV HHHHHHHHHHHHHHEEEEEEEECCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]