Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789371

Identifier: 91789371

GI number: 91789371

Start: 3718893

End: 3720071

Strand: Reverse

Name: 91789371

Synonym: Bpro_3517

Alternate gene names: NA

Gene position: 3720071-3718893 (Counterclockwise)

Preceding gene: 91789372

Following gene: 91789368

Centisome position: 71.54

GC content: 63.61

Gene sequence:

>1179_bases
ATGAAGCTACTTCAATCTCTAAGACTGGCCCTGGGCGGTCTTCTCGTGGCGGGCCTCGCGGCCTGCGGCGGTGGTGGCGG
CGGTGCCAGCAACGGTACCCTTCGACTGGCGCTCACCGACGCGCCGGCTTGCGGCTACGACGCCGTCAATGTGACGATAG
AGAAAGTTCGCGTGCACAAGAGTGACAGCGCCGGCGACGCGGACGGCGGCTGGGCTGAAATCGTGCTCAATCCTGCCAGG
CGCGTGAACCTGCTGGACCTGACCAACGGGGTTCTCGACGAACTCGGCCAGACACCCTTGCCCGCGGGCAAGTACACGCA
ACTCAGGCTGGTCCTGACTGCCAATAGCGGAAGCAATCCGCTGGCCAATTCCGTGGTGTTCACTGACACGAAAGCCGAGG
TGGCGCTCAAGACACCGAGCGGTCAACAGTCCGGCCTCAAAACCAATATTGACATTGACATCGCCCCGAACAGGCTCGCC
GATTTCGTGCTCGACTTCGATGCCTGCAAGTCCGTGGTTTACGCGGGCACTTCGGGTCAATACCTGCTCAAGCCGGTCCT
CATCATGATTCCGCGCTACATCTCCGGCGTGTCCGGATTCGTGAACGCGTCGATAGTGAACGGCACGACCACGGTGTCCC
TGCAGCAGGGCGGCGTCATCATCAAGTCCACCACGCCCAGGAGCGACGGCACCTTCCTGCTGCAACCGGTTGCCCCGGGC
AGCTATACGCTGGTGCTCACAGGATCGGGCCGCGCCACGGCCGTCGTCACCAGCGTGCCCGTGGTGACAGACACGGTGAC
AGCCCTCAATACCTCCGGCACCGCGCTCAACCCGGCGGTTTCCGCCACCGGTACCGTGAACGGCACAGTGAACGGCACCG
CACCGCTGGTGCTGGACACCCTGGTGCGTGCGCAACAGATCCTGACGGGCGGCACCACGGTGGAAGTGGCGGGGCGCTTT
GTGGATGGGCTGGGTAATTACGCTTACCTGCTGCCCGTCGATGCGCCGCAGGTGGCGCCCTACGTGGTAGTACCCGGCCC
GCTGGTATTTGTGGCCGACGCGGGTGCGGCTGGCCAATACACACTGCGGGCAAGCCTGACCGGATTTGCGGACAAGACGG
CCATACGCCCTGTGTTGACGTCTGGTGCCACGATCACCACCAACTTCACTTTCCCCTGA

Upstream 100 bases:

>100_bases
GGCGGGTATCGCAGCCATCGGTAGGCTTACCGAGCGGCGCGATGGATTCGCTCCCGGCTCCGCTGACTGTCCCGACAAAT
CAACCTGAATGAGGTGTTCC

Downstream 100 bases:

>100_bases
GTCATCAGAAGAGGAAGCTGGCAGGCCCTGAAGCCTGAGCAGCCAGAAAAAACGGCTGGACCGCCGGCGCTCCACGGGTA
TTTTCCGGAGCGCCGGCGAG

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MKLLQSLRLALGGLLVAGLAACGGGGGGASNGTLRLALTDAPACGYDAVNVTIEKVRVHKSDSAGDADGGWAEIVLNPAR
RVNLLDLTNGVLDELGQTPLPAGKYTQLRLVLTANSGSNPLANSVVFTDTKAEVALKTPSGQQSGLKTNIDIDIAPNRLA
DFVLDFDACKSVVYAGTSGQYLLKPVLIMIPRYISGVSGFVNASIVNGTTTVSLQQGGVIIKSTTPRSDGTFLLQPVAPG
SYTLVLTGSGRATAVVTSVPVVTDTVTALNTSGTALNPAVSATGTVNGTVNGTAPLVLDTLVRAQQILTGGTTVEVAGRF
VDGLGNYAYLLPVDAPQVAPYVVVPGPLVFVADAGAAGQYTLRASLTGFADKTAIRPVLTSGATITTNFTFP

Sequences:

>Translated_392_residues
MKLLQSLRLALGGLLVAGLAACGGGGGGASNGTLRLALTDAPACGYDAVNVTIEKVRVHKSDSAGDADGGWAEIVLNPAR
RVNLLDLTNGVLDELGQTPLPAGKYTQLRLVLTANSGSNPLANSVVFTDTKAEVALKTPSGQQSGLKTNIDIDIAPNRLA
DFVLDFDACKSVVYAGTSGQYLLKPVLIMIPRYISGVSGFVNASIVNGTTTVSLQQGGVIIKSTTPRSDGTFLLQPVAPG
SYTLVLTGSGRATAVVTSVPVVTDTVTALNTSGTALNPAVSATGTVNGTVNGTAPLVLDTLVRAQQILTGGTTVEVAGRF
VDGLGNYAYLLPVDAPQVAPYVVVPGPLVFVADAGAAGQYTLRASLTGFADKTAIRPVLTSGATITTNFTFP
>Mature_392_residues
MKLLQSLRLALGGLLVAGLAACGGGGGGASNGTLRLALTDAPACGYDAVNVTIEKVRVHKSDSAGDADGGWAEIVLNPAR
RVNLLDLTNGVLDELGQTPLPAGKYTQLRLVLTANSGSNPLANSVVFTDTKAEVALKTPSGQQSGLKTNIDIDIAPNRLA
DFVLDFDACKSVVYAGTSGQYLLKPVLIMIPRYISGVSGFVNASIVNGTTTVSLQQGGVIIKSTTPRSDGTFLLQPVAPG
SYTLVLTGSGRATAVVTSVPVVTDTVTALNTSGTALNPAVSATGTVNGTVNGTAPLVLDTLVRAQQILTGGTTVEVAGRF
VDGLGNYAYLLPVDAPQVAPYVVVPGPLVFVADAGAAGQYTLRASLTGFADKTAIRPVLTSGATITTNFTFP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39913; Mature: 39913

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLQSLRLALGGLLVAGLAACGGGGGGASNGTLRLALTDAPACGYDAVNVTIEKVRVHK
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEEEEC
SDSAGDADGGWAEIVLNPARRVNLLDLTNGVLDELGQTPLPAGKYTQLRLVLTANSGSNP
CCCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCC
LANSVVFTDTKAEVALKTPSGQQSGLKTNIDIDIAPNRLADFVLDFDACKSVVYAGTSGQ
CCCCEEEECCCCEEEEECCCCCCCCCEEEEEEEECCHHHHHHHCCHHHHHHEEEECCCCC
YLLKPVLIMIPRYISGVSGFVNASIVNGTTTVSLQQGGVIIKSTTPRSDGTFLLQPVAPG
HHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEEEECCCEEEEECCCCCCCCEEEEECCCC
SYTLVLTGSGRATAVVTSVPVVTDTVTALNTSGTALNPAVSATGTVNGTVNGTAPLVLDT
CEEEEEECCCCEEEEEEECCEEEEEEEEECCCCCCCCCCEECCEEECEEECCCCHHHHHH
LVRAQQILTGGTTVEVAGRFVDGLGNYAYLLPVDAPQVAPYVVVPGPLVFVADAGAAGQY
HHHHHHHHCCCCEEEEHHHHHHCCCCEEEEEECCCCCCCCEEEECCCEEEEECCCCCCCE
TLRASLTGFADKTAIRPVLTSGATITTNFTFP
EEEEEECCCCCCHHHCHHHCCCCEEEEEECCC
>Mature Secondary Structure
MKLLQSLRLALGGLLVAGLAACGGGGGGASNGTLRLALTDAPACGYDAVNVTIEKVRVHK
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEEEEC
SDSAGDADGGWAEIVLNPARRVNLLDLTNGVLDELGQTPLPAGKYTQLRLVLTANSGSNP
CCCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCC
LANSVVFTDTKAEVALKTPSGQQSGLKTNIDIDIAPNRLADFVLDFDACKSVVYAGTSGQ
CCCCEEEECCCCEEEEECCCCCCCCCEEEEEEEECCHHHHHHHCCHHHHHHEEEECCCCC
YLLKPVLIMIPRYISGVSGFVNASIVNGTTTVSLQQGGVIIKSTTPRSDGTFLLQPVAPG
HHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEEEECCCEEEEECCCCCCCCEEEEECCCC
SYTLVLTGSGRATAVVTSVPVVTDTVTALNTSGTALNPAVSATGTVNGTVNGTAPLVLDT
CEEEEEECCCCEEEEEEECCEEEEEEEEECCCCCCCCCCEECCEEECEEECCCCHHHHHH
LVRAQQILTGGTTVEVAGRFVDGLGNYAYLLPVDAPQVAPYVVVPGPLVFVADAGAAGQY
HHHHHHHHCCCCEEEEHHHHHHCCCCEEEEEECCCCCCCCEEEECCCEEEEECCCCCCCE
TLRASLTGFADKTAIRPVLTSGATITTNFTFP
EEEEEECCCCCCHHHCHHHCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA