| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789370
Identifier: 91789370
GI number: 91789370
Start: 3717713
End: 3718669
Strand: Direct
Name: 91789370
Synonym: Bpro_3516
Alternate gene names: NA
Gene position: 3717713-3718669 (Clockwise)
Preceding gene: 91789369
Following gene: 91789374
Centisome position: 71.49
GC content: 65.31
Gene sequence:
>957_bases ATGAAGACATTCACTTCCCGCATCCTGGCTGGCCTGCTGTGCGCCCTGGCCCTGCCTGCCGCCGTGCTGGCCCAAGCCAC CTACCCCAGCCGGCCAATTGAGCTGATCGTGCCCTACCCGGCCGGCGGCGGCACCGACGTGCTGGGCCGGGCCTTCGCGC TGGCGTCGGTCAAGCACCTGCCGCAGAACCTGATCGTGGTCAACAAGCCCGGCGCCAGCGGCGCCATCGGCTGGGCCGAC GTCATCAATGGCAAGCCGGAGGGCTACAAGGTCGCCCTGCTCGCGACCGACCTGATGACGCAGCCCAACATGGGCCTGAC CAAAATCACCCATGAGGACTTCATCCCGATCGCCCGCCTCAACTACGACCCGGCGGCCATCACGGTGCGCGCTGATGCGC CGTGGAACACCGTCGAGGAATTCCTGGCGGCTGCGAAACAGGGCGACTTCCGCGTGGGCAATGGCGGCAACGGCTCGACC TGGCATCTTGCCGCCGCGGCCGTGGAAGACAAGACCGGGGTGAAGTTCAACCACATTCCGTTTGCCGGCGCTGCACCGGC CGCGCTGTCCCTGCTGGGCGGGCACATCGAGGCCATCACGGTGAGCGCGGCGGAAGTCTATGCCTACACCTCGACGGGCA AGCTGAAAACGCTGGCCGTGATGTCCGAGCAGCGCATCAAGGGCTTCGAGAAAGTGCCGACGCTCAAGGAACGCAACATC GACATTTCCATCGGCACCTGGCGCGGCCTGGCCGTGACCAAGGGCACGCCGCCCGAGATTGTCAATGTGCTGCGCGCAGC GACCGCGAAGATCGTGACCGAACAAAGCCTGCGTGACGCGCTGGACCGCCAGAACATGGGCTACGCCTATGCCGAAGGCG AGGCCTTTGGCGCCGTCATGGCCAGGGACCATGCTTTTTACAAAGGCCTGATCAACAAGCTCGGCCTGAAGCAGTAA
Upstream 100 bases:
>100_bases GGAGTTCGAGTTCCCGAACGGCTCCGCCTGGGCCTGAAGATCCTGAACTTCACGTTCCTTCAAATTATCACGACATCGCT ACTAACAAAGAGAGACAAGC
Downstream 100 bases:
>100_bases GCACAAAGCAACCACAACGCAGAAAAGAGGCAGGGTTCCTGCCTCTTTTCTCTTTTCTCTTCTCGTTTGGGTTGCGATCG CTCCAGGGGCATCGCCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: ORF7 [H]
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MKTFTSRILAGLLCALALPAAVLAQATYPSRPIELIVPYPAGGGTDVLGRAFALASVKHLPQNLIVVNKPGASGAIGWAD VINGKPEGYKVALLATDLMTQPNMGLTKITHEDFIPIARLNYDPAAITVRADAPWNTVEEFLAAAKQGDFRVGNGGNGST WHLAAAAVEDKTGVKFNHIPFAGAAPAALSLLGGHIEAITVSAAEVYAYTSTGKLKTLAVMSEQRIKGFEKVPTLKERNI DISIGTWRGLAVTKGTPPEIVNVLRAATAKIVTEQSLRDALDRQNMGYAYAEGEAFGAVMARDHAFYKGLINKLGLKQ
Sequences:
>Translated_318_residues MKTFTSRILAGLLCALALPAAVLAQATYPSRPIELIVPYPAGGGTDVLGRAFALASVKHLPQNLIVVNKPGASGAIGWAD VINGKPEGYKVALLATDLMTQPNMGLTKITHEDFIPIARLNYDPAAITVRADAPWNTVEEFLAAAKQGDFRVGNGGNGST WHLAAAAVEDKTGVKFNHIPFAGAAPAALSLLGGHIEAITVSAAEVYAYTSTGKLKTLAVMSEQRIKGFEKVPTLKERNI DISIGTWRGLAVTKGTPPEIVNVLRAATAKIVTEQSLRDALDRQNMGYAYAEGEAFGAVMARDHAFYKGLINKLGLKQ >Mature_318_residues MKTFTSRILAGLLCALALPAAVLAQATYPSRPIELIVPYPAGGGTDVLGRAFALASVKHLPQNLIVVNKPGASGAIGWAD VINGKPEGYKVALLATDLMTQPNMGLTKITHEDFIPIARLNYDPAAITVRADAPWNTVEEFLAAAKQGDFRVGNGGNGST WHLAAAAVEDKTGVKFNHIPFAGAAPAALSLLGGHIEAITVSAAEVYAYTSTGKLKTLAVMSEQRIKGFEKVPTLKERNI DISIGTWRGLAVTKGTPPEIVNVLRAATAKIVTEQSLRDALDRQNMGYAYAEGEAFGAVMARDHAFYKGLINKLGLKQ
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 - InterPro: IPR006311 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 33688; Mature: 33688
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTFTSRILAGLLCALALPAAVLAQATYPSRPIELIVPYPAGGGTDVLGRAFALASVKHL CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHC PQNLIVVNKPGASGAIGWADVINGKPEGYKVALLATDLMTQPNMGLTKITHEDFIPIARL CCCEEEEECCCCCCCCCHHHHHCCCCCCEEEEEEEEEHHCCCCCCCEEECCCCCCCEEEE NYDPAAITVRADAPWNTVEEFLAAAKQGDFRVGNGGNGSTWHLAAAAVEDKTGVKFNHIP CCCCEEEEEECCCCHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEEEECCCCCCEEECCC FAGAAPAALSLLGGHIEAITVSAAEVYAYTSTGKLKTLAVMSEQRIKGFEKVPTLKERNI CCCCHHHHHHHHCCCEEEEEEEEEEEEEEECCCCEEEEEHHHHHHHCCHHHCCCHHHCCE DISIGTWRGLAVTKGTPPEIVNVLRAATAKIVTEQSLRDALDRQNMGYAYAEGEAFGAVM EEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHH ARDHAFYKGLINKLGLKQ HHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKTFTSRILAGLLCALALPAAVLAQATYPSRPIELIVPYPAGGGTDVLGRAFALASVKHL CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHC PQNLIVVNKPGASGAIGWADVINGKPEGYKVALLATDLMTQPNMGLTKITHEDFIPIARL CCCEEEEECCCCCCCCCHHHHHCCCCCCEEEEEEEEEHHCCCCCCCEEECCCCCCCEEEE NYDPAAITVRADAPWNTVEEFLAAAKQGDFRVGNGGNGSTWHLAAAAVEDKTGVKFNHIP CCCCEEEEEECCCCHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEEEECCCCCCEEECCC FAGAAPAALSLLGGHIEAITVSAAEVYAYTSTGKLKTLAVMSEQRIKGFEKVPTLKERNI CCCCHHHHHHHHCCCEEEEEEEEEEEEEEECCCCEEEEEHHHHHHHCCHHHCCCHHHCCE DISIGTWRGLAVTKGTPPEIVNVLRAATAKIVTEQSLRDALDRQNMGYAYAEGEAFGAVM EEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHH ARDHAFYKGLINKLGLKQ HHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7851418 [H]