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The map label for this gene is cycA [H]

Identifier: 91789355

GI number: 91789355

Start: 3699182

End: 3699859

Strand: Direct

Name: cycA [H]

Synonym: Bpro_3501

Alternate gene names: 91789355

Gene position: 3699182-3699859 (Clockwise)

Preceding gene: 91789354

Following gene: 91789356

Centisome position: 71.13

GC content: 67.55

Gene sequence:

>678_bases
ATGGCTCTTGTAAGCTTCGTCCGCATCGCCCTCCTGGGGATCGCCGGGGGGGTCTCGTTCGTTGCCCCGTCTTATGGTGC
AGAAGACGTCGAGCGCGGCGCACAGGTGTCGCGTTCCTGCATGGCCTGTCATTCGTTCTCGCCCGGGCGCCACATGACCG
GCCCGAGCCTCGCAGGGGTGTGGGGCCGCCGGGCGGGCACCGCCGCCGGGTTCAGCCGCTATTCGGATGCGCTGAAGCGC
TCGGAAATCGTCTGGACCGAGAAGTCCCTGGATGCATGGCTCCGAAAGCCGGCGGCGTTGATTCCGGGCAACACCATGCT
CTTCGATGGCATACCGGACCCGGGTACGCGCGCCGATCTGCTGGCATATCTCCAGGCCGTGTCCGAAGGTCGCGCTTCGG
CACCGGAGCGCGGGCTGCCGAACCTCAAGCGCGTCGACGCGTCCAGCCAGGTGACCGCGATCCGCTATTGCGGCGATGCC
TACCGCGTCCTCACCGGCGACGGCAAGAGCCGCACCTGGTGGGAATTCAACCTGCGGTTCAAGACCGACGGCAGCCCCGA
CGGGCCGTCGACCGGCAAGCCGGTCATCGTCGGCAGCGGCATGCAGGGGGACCGGGCCGCGGTCGTCTTCTCGCGCCCCG
AGGAGATATCGATGTTCATTCGAAGGGAGTGCCCGTGA

Upstream 100 bases:

>100_bases
GCCCGCTCCCAGCAACCTCGAGGTGCCGCCGCACCACTACACCGGCGAGTCGAAACTACTCATCGGCGAGGGGCCGCGGG
CCTGATCGACGAGGCTCCAG

Downstream 100 bases:

>100_bases
AGGACAGAACAACGGGCCGCCCGGAGGTCGCCGCTATTGACCCCGCCCACGCCGTGCAGGCGAAGACGGCGCGGCCGCGC
GCCGCGGCAGGAAGAAGGGC

Product: class I cytochrome c

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MALVSFVRIALLGIAGGVSFVAPSYGAEDVERGAQVSRSCMACHSFSPGRHMTGPSLAGVWGRRAGTAAGFSRYSDALKR
SEIVWTEKSLDAWLRKPAALIPGNTMLFDGIPDPGTRADLLAYLQAVSEGRASAPERGLPNLKRVDASSQVTAIRYCGDA
YRVLTGDGKSRTWWEFNLRFKTDGSPDGPSTGKPVIVGSGMQGDRAAVVFSRPEEISMFIRRECP

Sequences:

>Translated_225_residues
MALVSFVRIALLGIAGGVSFVAPSYGAEDVERGAQVSRSCMACHSFSPGRHMTGPSLAGVWGRRAGTAAGFSRYSDALKR
SEIVWTEKSLDAWLRKPAALIPGNTMLFDGIPDPGTRADLLAYLQAVSEGRASAPERGLPNLKRVDASSQVTAIRYCGDA
YRVLTGDGKSRTWWEFNLRFKTDGSPDGPSTGKPVIVGSGMQGDRAAVVFSRPEEISMFIRRECP
>Mature_224_residues
ALVSFVRIALLGIAGGVSFVAPSYGAEDVERGAQVSRSCMACHSFSPGRHMTGPSLAGVWGRRAGTAAGFSRYSDALKRS
EIVWTEKSLDAWLRKPAALIPGNTMLFDGIPDPGTRADLLAYLQAVSEGRASAPERGLPNLKRVDASSQVTAIRYCGDAY
RVLTGDGKSRTWWEFNLRFKTDGSPDGPSTGKPVIVGSGMQGDRAAVVFSRPEEISMFIRRECP

Specific function: Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is

COG id: COG3474

COG function: function code C; Cytochrome c2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family [H]

Homologues:

Organism=Homo sapiens, GI11128019, Length=102, Percent_Identity=42.156862745098, Blast_Score=88, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI17539604, Length=103, Percent_Identity=40.7766990291262, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17566554, Length=107, Percent_Identity=36.4485981308411, Blast_Score=76, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6322508, Length=108, Percent_Identity=34.2592592592593, Blast_Score=80, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6320796, Length=96, Percent_Identity=34.375, Blast_Score=70, Evalue=3e-13,
Organism=Drosophila melanogaster, GI17137204, Length=103, Percent_Identity=41.747572815534, Blast_Score=93, Evalue=1e-19,
Organism=Drosophila melanogaster, GI17137228, Length=105, Percent_Identity=41.9047619047619, Blast_Score=91, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 24173; Mature: 24042

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALVSFVRIALLGIAGGVSFVAPSYGAEDVERGAQVSRSCMACHSFSPGRHMTGPSLAGV
CHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
WGRRAGTAAGFSRYSDALKRSEIVWTEKSLDAWLRKPAALIPGNTMLFDGIPDPGTRADL
HCCCCCCHHHHHHHHHHHHHHHEEEEHHHHHHHHHCCCEECCCCEEEECCCCCCCCHHHH
LAYLQAVSEGRASAPERGLPNLKRVDASSQVTAIRYCGDAYRVLTGDGKSRTWWEFNLRF
HHHHHHHHCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCEEEEEECCCCCCEEEEEEEEE
KTDGSPDGPSTGKPVIVGSGMQGDRAAVVFSRPEEISMFIRRECP
ECCCCCCCCCCCCCEEEECCCCCCCEEEEEECCHHHHHHHHCCCC
>Mature Secondary Structure 
ALVSFVRIALLGIAGGVSFVAPSYGAEDVERGAQVSRSCMACHSFSPGRHMTGPSLAGV
HHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
WGRRAGTAAGFSRYSDALKRSEIVWTEKSLDAWLRKPAALIPGNTMLFDGIPDPGTRADL
HCCCCCCHHHHHHHHHHHHHHHEEEEHHHHHHHHHCCCEECCCCEEEECCCCCCCCHHHH
LAYLQAVSEGRASAPERGLPNLKRVDASSQVTAIRYCGDAYRVLTGDGKSRTWWEFNLRF
HHHHHHHHCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCEEEEEECCCCCCEEEEEEEEE
KTDGSPDGPSTGKPVIVGSGMQGDRAAVVFSRPEEISMFIRRECP
ECCCCCCCCCCCCCEEEECCCCCCCEEEEEECCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1697576; 174109; 7674304 [H]