Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91789353

Identifier: 91789353

GI number: 91789353

Start: 3698237

End: 3698491

Strand: Direct

Name: 91789353

Synonym: Bpro_3499

Alternate gene names: NA

Gene position: 3698237-3698491 (Clockwise)

Preceding gene: 91789352

Following gene: 91789354

Centisome position: 71.12

GC content: 58.43

Gene sequence:

>255_bases
ATGAAATGCGATTCGAAAATGATGGTGAAGATGGCTCTCGGGCTGGGCGTTGGCCTCGCGGTCGCGTACTTCGCGCTGCC
CGCGGCCCAAGTGCTCATTCTGGCCAGCGCACCCTTCTTGGCGGCACTCATCTGCCCCGTGGCGATGTTCTTCATGATGA
AGGGCATGAATGGCGACAAGAAGGATGAGAGCAGAACGCCAGACCAAAGCAAGGTGAAGTCCGAGACCCGCCATGCCGAT
CCAGGCAAAGCTTAG

Upstream 100 bases:

>100_bases
TACCGGGACCGATGACTTGCCTGCATCGTCAATTTAAAAGTTCCGCTAACCGGTGCGCAAAGGGGTTTTCGACCCTGCCC
CAGTCTCAAAGGAGAAAAAT

Downstream 100 bases:

>100_bases
CGAGCAACGCCCGAATTCCGCATTCACAGGCGGCTGGCCACACATTCCACTCACCCAGGATCCAGGCGAGGCCTTCAAGT
GTCACACACGGCAACCCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MKCDSKMMVKMALGLGVGLAVAYFALPAAQVLILASAPFLAALICPVAMFFMMKGMNGDKKDESRTPDQSKVKSETRHAD
PGKA

Sequences:

>Translated_84_residues
MKCDSKMMVKMALGLGVGLAVAYFALPAAQVLILASAPFLAALICPVAMFFMMKGMNGDKKDESRTPDQSKVKSETRHAD
PGKA
>Mature_84_residues
MKCDSKMMVKMALGLGVGLAVAYFALPAAQVLILASAPFLAALICPVAMFFMMKGMNGDKKDESRTPDQSKVKSETRHAD
PGKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8949; Mature: 8949

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
9.5 %Met     (Translated Protein)
11.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
9.5 %Met     (Mature Protein)
11.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCDSKMMVKMALGLGVGLAVAYFALPAAQVLILASAPFLAALICPVAMFFMMKGMNGDK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC
KDESRTPDQSKVKSETRHADPGKA
CCCCCCCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKCDSKMMVKMALGLGVGLAVAYFALPAAQVLILASAPFLAALICPVAMFFMMKGMNGDK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC
KDESRTPDQSKVKSETRHADPGKA
CCCCCCCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA