| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789319
Identifier: 91789319
GI number: 91789319
Start: 3666704
End: 3667843
Strand: Reverse
Name: 91789319
Synonym: Bpro_3464
Alternate gene names: NA
Gene position: 3667843-3666704 (Counterclockwise)
Preceding gene: 91789321
Following gene: 91789318
Centisome position: 70.53
GC content: 62.81
Gene sequence:
>1140_bases ATGAACAATCCGGCCACGCTGACACGGCTGCTCACGCGCAAAGATGCATTGAATCACACCCGCATTGCGGTTGAACAGCC CGCAGGAGACACCCTCCACGCGGCTGCCGGCGAGGCGCTGCTGAAAATCCGGCGCGTCGCCCTCACCACCAACAACATCA CCTACGCCGCGTTCGGCGAGGCCATGCAGTACTGGGATTTTTTCCCGACCGGTGAGGCCGGGTGGGGCCACATGCCGGTC TGGGGTTTTGCCGACGTGGTGAGCTCCGGTGTGCCCGGCCTGGAAGTGGGCGAGCGCTTTTACGGCTACTTTCCCATTGC GAGCCATCTGCGCGTGCAGCCGCAGCGGGTGACGGAGCGCGGCTTTTATGACGGCGCCGCACACCGGCAAACCCTGACTT CGGCCTACAACCAGTACATGCGCTGCAGCGCCGATGCCGCCTGGCGCGAGGCCGACGAAAACTGCCAGATGCTGGTGCGG CCGTTGTTCATCACTTCGTTCATGCTCGCCGATTTTCTGCAGGACAACGCTTTCTTTGGGGCGGCGCAGGTGGTGTTTTC CAGCGCGTCCAGCAAAACTGCCTATGGAACAGCCTTTTGCCTGGAGGCGTATCCAGCGATCCACCGCGTGGCGCTGACCT CGGCGCGCAACCAGCGCTTTGTCGAAGGCCTGGGCTGCTATGGCGAGGTCGCCAGCTATGAGGCATTGCCGCGGCTTGAC CGCAGAAAACTCACCCTGTATGTCGATTTCTCGGGTGACGAAGACCTGCGCCGGGCGGTGCACGAGCACTTCGGCGAATC GCTGGTGTACGACTGCTATGCCGGTTCGGCGCAGAACACGCAGTTCCTGCGCCCGCTCGACCTGCCAGGGCCCGCACCGC AGTTTTATTTTGCACCGGTACAAATCCGCAAACGAAATGCCGACTGGGGACATGCCGTGGTGAACCAGCGCTTCAACGAA GCGCAGCTGGCCTTCATCCGGCGCATCAGCGATGCGCAGCAGCCCTGGATGCAGGTGGTGGAACACCGTGGATTTGAAGC CGCGCAGGCCCTGATTGATGACCTGCATGGCGGCCGCCTGGATCCGCAGCAGGGTCATGTGGTGGTGCTGGACGGAGCGC CTGAGGATGGTGTACGCTAA
Upstream 100 bases:
>100_bases CGAACCCGGAAGAAGGTGGCCGGCTATACATTGGTTGTCATGTACTGATCATGTACTGATCGCTTGATCAAATTCCAGAT GATCCAAAGGAAGAACGACC
Downstream 100 bases:
>100_bases TAATTTGCACATCACCGGCGGCTGACATGAGCATTGATCACACACACGGCCCCCACGACCCTGCGCATACGCATGAAGCA CCAGAGCCGGCCTGGAAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MNNPATLTRLLTRKDALNHTRIAVEQPAGDTLHAAAGEALLKIRRVALTTNNITYAAFGEAMQYWDFFPTGEAGWGHMPV WGFADVVSSGVPGLEVGERFYGYFPIASHLRVQPQRVTERGFYDGAAHRQTLTSAYNQYMRCSADAAWREADENCQMLVR PLFITSFMLADFLQDNAFFGAAQVVFSSASSKTAYGTAFCLEAYPAIHRVALTSARNQRFVEGLGCYGEVASYEALPRLD RRKLTLYVDFSGDEDLRRAVHEHFGESLVYDCYAGSAQNTQFLRPLDLPGPAPQFYFAPVQIRKRNADWGHAVVNQRFNE AQLAFIRRISDAQQPWMQVVEHRGFEAAQALIDDLHGGRLDPQQGHVVVLDGAPEDGVR
Sequences:
>Translated_379_residues MNNPATLTRLLTRKDALNHTRIAVEQPAGDTLHAAAGEALLKIRRVALTTNNITYAAFGEAMQYWDFFPTGEAGWGHMPV WGFADVVSSGVPGLEVGERFYGYFPIASHLRVQPQRVTERGFYDGAAHRQTLTSAYNQYMRCSADAAWREADENCQMLVR PLFITSFMLADFLQDNAFFGAAQVVFSSASSKTAYGTAFCLEAYPAIHRVALTSARNQRFVEGLGCYGEVASYEALPRLD RRKLTLYVDFSGDEDLRRAVHEHFGESLVYDCYAGSAQNTQFLRPLDLPGPAPQFYFAPVQIRKRNADWGHAVVNQRFNE AQLAFIRRISDAQQPWMQVVEHRGFEAAQALIDDLHGGRLDPQQGHVVVLDGAPEDGVR >Mature_379_residues MNNPATLTRLLTRKDALNHTRIAVEQPAGDTLHAAAGEALLKIRRVALTTNNITYAAFGEAMQYWDFFPTGEAGWGHMPV WGFADVVSSGVPGLEVGERFYGYFPIASHLRVQPQRVTERGFYDGAAHRQTLTSAYNQYMRCSADAAWREADENCQMLVR PLFITSFMLADFLQDNAFFGAAQVVFSSASSKTAYGTAFCLEAYPAIHRVALTSARNQRFVEGLGCYGEVASYEALPRLD RRKLTLYVDFSGDEDLRRAVHEHFGESLVYDCYAGSAQNTQFLRPLDLPGPAPQFYFAPVQIRKRNADWGHAVVNQRFNE AQLAFIRRISDAQQPWMQVVEHRGFEAAQALIDDLHGGRLDPQQGHVVVLDGAPEDGVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42319; Mature: 42319
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNPATLTRLLTRKDALNHTRIAVEQPAGDTLHAAAGEALLKIRRVALTTNNITYAAFGE CCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHEEECCEEEHHHHH AMQYWDFFPTGEAGWGHMPVWGFADVVSSGVPGLEVGERFYGYFPIASHLRVQPQRVTER HHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHCCCCHHHHHHC GFYDGAAHRQTLTSAYNQYMRCSADAAWREADENCQMLVRPLFITSFMLADFLQDNAFFG CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH AAQVVFSSASSKTAYGTAFCLEAYPAIHRVALTSARNQRFVEGLGCYGEVASYEALPRLD HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC RRKLTLYVDFSGDEDLRRAVHEHFGESLVYDCYAGSAQNTQFLRPLDLPGPAPQFYFAPV CCEEEEEEEECCCHHHHHHHHHHHCCCEEEHHCCCCCCCCCCCCCCCCCCCCCCEEECCE QIRKRNADWGHAVVNQRFNEAQLAFIRRISDAQQPWMQVVEHRGFEAAQALIDDLHGGRL EEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC DPQQGHVVVLDGAPEDGVR CCCCCCEEEECCCCCCCCC >Mature Secondary Structure MNNPATLTRLLTRKDALNHTRIAVEQPAGDTLHAAAGEALLKIRRVALTTNNITYAAFGE CCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHEEECCEEEHHHHH AMQYWDFFPTGEAGWGHMPVWGFADVVSSGVPGLEVGERFYGYFPIASHLRVQPQRVTER HHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHCCCCHHHHHHC GFYDGAAHRQTLTSAYNQYMRCSADAAWREADENCQMLVRPLFITSFMLADFLQDNAFFG CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH AAQVVFSSASSKTAYGTAFCLEAYPAIHRVALTSARNQRFVEGLGCYGEVASYEALPRLD HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC RRKLTLYVDFSGDEDLRRAVHEHFGESLVYDCYAGSAQNTQFLRPLDLPGPAPQFYFAPV CCEEEEEEEECCCHHHHHHHHHHHCCCEEEHHCCCCCCCCCCCCCCCCCCCCCCEEECCE QIRKRNADWGHAVVNQRFNEAQLAFIRRISDAQQPWMQVVEHRGFEAAQALIDDLHGGRL EEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC DPQQGHVVVLDGAPEDGVR CCCCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA