| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is fabG [H]
Identifier: 91789269
GI number: 91789269
Start: 3610823
End: 3611566
Strand: Direct
Name: fabG [H]
Synonym: Bpro_3414
Alternate gene names: 91789269
Gene position: 3610823-3611566 (Clockwise)
Preceding gene: 91789267
Following gene: 91789270
Centisome position: 69.44
GC content: 64.52
Gene sequence:
>744_bases ATGAGCACCAGCAACAAAACCGTCGTGATCACCGGCGCATCCAGCGGCATCGGCTTCGCATTGGCCGAGGCCTATTTGAA ACGGGGCTACAACGTGGTCGGCAATGCCCGCACCTCCGCGCGCCTGCAGGCGGCCGCCGCCAAACTCGGCAACCCGGCCA ACTTTTTGGGGGTCGAGGGCGACATTGCCCAACCGGCGACCGCCAAAAACCTGTTTTTCCAGGCCATCGCCGCCTTCGGT AAGGTCGACATCCTCGTCAACAACGCCGGCATCTTCACCGCCAAGCCCATCGTCGATTACACCGAGGACGACCTGGAAAC CATAGTCGGCACCAACCTGAAAGGCTTTTTCTACCCCTCGCAGCAAGCCGCCGCGCACATGGCCAAGAATAAGCAGGGCC ACATCGTGACCATCACCGCCAGCATCGCGATGCAGCCCACCATGAAAGTGCCGGCACTGCTGCCGGTGCTGATCAAGGGC GGCCTCAACGACGCGACCCGCGCGCTGGCGCTGGAACTGGCCTCGTCCAATGTGAAGGTCTCGGCCGTCGCGCCCGGCGT CATCGCCACCCCCATGCACAGCCCCGACGAAGGCACCCAGTCCTTCCTCAAGACGCTGTCGCCGTCGGCCCGCACCGGCG AGACCCAGGACGTCGTGGACGCCGTGCTCTACCTGACCGACGCGCAATTCACCACCGGTGTCGTGTTGGCGGTCGACGGT GGCGCTTCGGCCGGGACCTGGTAA
Upstream 100 bases:
>100_bases TTCATCACACGGGGACCGAATAACAAATTTCACCCGGCCTGGCGCGGGACTCCACCGCGAATTTCGCGCCGCTTAGTTAA CCCACTGAAGGACTATTGGA
Downstream 100 bases:
>100_bases TCCACACATCGTGGACGAACGGCCTTGCCGCGCGTTCACGCCATTTGCAAATCCACCGGCGATGACGCCAACCCTTGAGG AGTTCCTGACATGCCCTACG
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MSTSNKTVVITGASSGIGFALAEAYLKRGYNVVGNARTSARLQAAAAKLGNPANFLGVEGDIAQPATAKNLFFQAIAAFG KVDILVNNAGIFTAKPIVDYTEDDLETIVGTNLKGFFYPSQQAAAHMAKNKQGHIVTITASIAMQPTMKVPALLPVLIKG GLNDATRALALELASSNVKVSAVAPGVIATPMHSPDEGTQSFLKTLSPSARTGETQDVVDAVLYLTDAQFTTGVVLAVDG GASAGTW
Sequences:
>Translated_247_residues MSTSNKTVVITGASSGIGFALAEAYLKRGYNVVGNARTSARLQAAAAKLGNPANFLGVEGDIAQPATAKNLFFQAIAAFG KVDILVNNAGIFTAKPIVDYTEDDLETIVGTNLKGFFYPSQQAAAHMAKNKQGHIVTITASIAMQPTMKVPALLPVLIKG GLNDATRALALELASSNVKVSAVAPGVIATPMHSPDEGTQSFLKTLSPSARTGETQDVVDAVLYLTDAQFTTGVVLAVDG GASAGTW >Mature_246_residues STSNKTVVITGASSGIGFALAEAYLKRGYNVVGNARTSARLQAAAAKLGNPANFLGVEGDIAQPATAKNLFFQAIAAFGK VDILVNNAGIFTAKPIVDYTEDDLETIVGTNLKGFFYPSQQAAAHMAKNKQGHIVTITASIAMQPTMKVPALLPVLIKGG LNDATRALALELASSNVKVSAVAPGVIATPMHSPDEGTQSFLKTLSPSARTGETQDVVDAVLYLTDAQFTTGVVLAVDGG ASAGTW
Specific function: Catalyzes A Reversible Reduction Of 5-Ketoglutanate To Form D-Gluconate. Dependent On Nadp, Almost Inactive With NAD. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI40254992, Length=237, Percent_Identity=32.4894514767932, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI19923817, Length=256, Percent_Identity=30.46875, Blast_Score=99, Evalue=4e-21, Organism=Homo sapiens, GI5031737, Length=247, Percent_Identity=29.9595141700405, Blast_Score=93, Evalue=2e-19, Organism=Homo sapiens, GI10190704, Length=247, Percent_Identity=31.5789473684211, Blast_Score=92, Evalue=3e-19, Organism=Homo sapiens, GI32483357, Length=248, Percent_Identity=29.4354838709677, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI15277342, Length=247, Percent_Identity=28.3400809716599, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI7705925, Length=243, Percent_Identity=28.8065843621399, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI226371731, Length=196, Percent_Identity=31.1224489795918, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI31542939, Length=207, Percent_Identity=28.0193236714976, Blast_Score=78, Evalue=8e-15, Organism=Homo sapiens, GI33667109, Length=192, Percent_Identity=30.7291666666667, Blast_Score=78, Evalue=8e-15, Organism=Homo sapiens, GI4758504, Length=245, Percent_Identity=29.3877551020408, Blast_Score=74, Evalue=8e-14, Organism=Homo sapiens, GI109715829, Length=243, Percent_Identity=25.1028806584362, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI59889578, Length=195, Percent_Identity=30.2564102564103, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI4504505, Length=194, Percent_Identity=27.8350515463918, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI126723750, Length=250, Percent_Identity=26.4, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI224922801, Length=154, Percent_Identity=27.9220779220779, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1790717, Length=253, Percent_Identity=31.2252964426877, Blast_Score=115, Evalue=4e-27, Organism=Escherichia coli, GI1787335, Length=245, Percent_Identity=33.8775510204082, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1789208, Length=248, Percent_Identity=29.8387096774194, Blast_Score=111, Evalue=4e-26, Organism=Escherichia coli, GI87082160, Length=249, Percent_Identity=32.1285140562249, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1788459, Length=246, Percent_Identity=32.9268292682927, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI87082100, Length=255, Percent_Identity=28.6274509803922, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1787905, Length=245, Percent_Identity=32.6530612244898, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1787820, Length=190, Percent_Identity=26.8421052631579, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI2367175, Length=248, Percent_Identity=29.4354838709677, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1786812, Length=260, Percent_Identity=26.1538461538462, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI1789378, Length=253, Percent_Identity=27.2727272727273, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI2367365, Length=241, Percent_Identity=26.9709543568465, Blast_Score=66, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71994600, Length=247, Percent_Identity=31.1740890688259, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17538480, Length=262, Percent_Identity=30.1526717557252, Blast_Score=99, Evalue=1e-21, Organism=Caenorhabditis elegans, GI71994604, Length=251, Percent_Identity=30.2788844621514, Blast_Score=97, Evalue=6e-21, Organism=Caenorhabditis elegans, GI17560332, Length=262, Percent_Identity=30.1526717557252, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17562910, Length=261, Percent_Identity=28.3524904214559, Blast_Score=95, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17551412, Length=262, Percent_Identity=28.6259541984733, Blast_Score=94, Evalue=8e-20, Organism=Caenorhabditis elegans, GI17562990, Length=259, Percent_Identity=27.4131274131274, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI115534694, Length=249, Percent_Identity=30.5220883534137, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17559104, Length=268, Percent_Identity=28.3582089552239, Blast_Score=90, Evalue=8e-19, Organism=Caenorhabditis elegans, GI17562904, Length=261, Percent_Identity=28.735632183908, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17561402, Length=250, Percent_Identity=31.2, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI72000259, Length=259, Percent_Identity=26.6409266409266, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17560150, Length=260, Percent_Identity=28.4615384615385, Blast_Score=87, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17544670, Length=263, Percent_Identity=26.9961977186312, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17563726, Length=257, Percent_Identity=28.0155642023346, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17508895, Length=198, Percent_Identity=32.8282828282828, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17562906, Length=261, Percent_Identity=26.4367816091954, Blast_Score=84, Evalue=9e-17, Organism=Caenorhabditis elegans, GI193204405, Length=261, Percent_Identity=27.5862068965517, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17562908, Length=261, Percent_Identity=27.5862068965517, Blast_Score=81, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17560676, Length=252, Percent_Identity=24.6031746031746, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI25147288, Length=242, Percent_Identity=29.3388429752066, Blast_Score=80, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17531453, Length=270, Percent_Identity=27.037037037037, Blast_Score=78, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17560220, Length=261, Percent_Identity=27.5862068965517, Blast_Score=77, Evalue=9e-15, Organism=Caenorhabditis elegans, GI17555706, Length=247, Percent_Identity=29.5546558704453, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17536651, Length=253, Percent_Identity=29.6442687747036, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17538486, Length=262, Percent_Identity=26.7175572519084, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17536025, Length=249, Percent_Identity=28.1124497991968, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17565030, Length=262, Percent_Identity=25.5725190839695, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17564282, Length=145, Percent_Identity=33.1034482758621, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI193203117, Length=250, Percent_Identity=29.6, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI193203115, Length=245, Percent_Identity=29.7959183673469, Blast_Score=64, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=237, Percent_Identity=28.2700421940928, Blast_Score=62, Evalue=6e-11, Organism=Drosophila melanogaster, GI23397609, Length=251, Percent_Identity=33.8645418326693, Blast_Score=121, Evalue=4e-28, Organism=Drosophila melanogaster, GI24644339, Length=259, Percent_Identity=34.7490347490347, Blast_Score=120, Evalue=9e-28, Organism=Drosophila melanogaster, GI28571526, Length=255, Percent_Identity=31.3725490196078, Blast_Score=102, Evalue=3e-22, Organism=Drosophila melanogaster, GI21357041, Length=259, Percent_Identity=30.8880308880309, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI21355319, Length=247, Percent_Identity=28.7449392712551, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI28571387, Length=238, Percent_Identity=31.9327731092437, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI24643142, Length=243, Percent_Identity=29.6296296296296, Blast_Score=81, Evalue=6e-16, Organism=Drosophila melanogaster, GI24663911, Length=237, Percent_Identity=29.535864978903, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI24641232, Length=233, Percent_Identity=28.3261802575107, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI281364494, Length=232, Percent_Identity=29.3103448275862, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI24641388, Length=236, Percent_Identity=29.6610169491525, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI116007236, Length=232, Percent_Identity=25.4310344827586, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI24639444, Length=243, Percent_Identity=26.3374485596708, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24644337, Length=198, Percent_Identity=30.3030303030303, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24648693, Length=234, Percent_Identity=28.2051282051282, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI21355889, Length=234, Percent_Identity=28.2051282051282, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI116007238, Length=139, Percent_Identity=30.2158273381295, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI21358495, Length=196, Percent_Identity=29.0816326530612, Blast_Score=64, Evalue=8e-11, Organism=Drosophila melanogaster, GI21357673, Length=190, Percent_Identity=26.8421052631579, Blast_Score=64, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 25481; Mature: 25350
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSNKTVVITGASSGIGFALAEAYLKRGYNVVGNARTSARLQAAAAKLGNPANFLGVEG CCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHCCCCCCEECCCC DIAQPATAKNLFFQAIAAFGKVDILVNNAGIFTAKPIVDYTEDDLETIVGTNLKGFFYPS CCCCCCHHHHHHHHHHHHHCCEEEEEECCCEEEECCCCCCCHHHHHHHHCCCCCEEECCC QQAAAHMAKNKQGHIVTITASIAMQPTMKVPALLPVLIKGGLNDATRALALELASSNVKV HHHHHHHHCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHEECCCCEEE SAVAPGVIATPMHSPDEGTQSFLKTLSPSARTGETQDVVDAVLYLTDAQFTTGVVLAVDG EEECCCEEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECC GASAGTW CCCCCCC >Mature Secondary Structure STSNKTVVITGASSGIGFALAEAYLKRGYNVVGNARTSARLQAAAAKLGNPANFLGVEG CCCCCEEEEEECCCCCHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHCCCCCCEECCCC DIAQPATAKNLFFQAIAAFGKVDILVNNAGIFTAKPIVDYTEDDLETIVGTNLKGFFYPS CCCCCCHHHHHHHHHHHHHCCEEEEEECCCEEEECCCCCCCHHHHHHHHCCCCCEEECCC QQAAAHMAKNKQGHIVTITASIAMQPTMKVPALLPVLIKGGLNDATRALALELASSNVKV HHHHHHHHCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHEECCCCEEE SAVAPGVIATPMHSPDEGTQSFLKTLSPSARTGETQDVVDAVLYLTDAQFTTGVVLAVDG EEECCCEEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECC GASAGTW CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8759840; 9384377; 9534248; 8654983 [H]