| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789234
Identifier: 91789234
GI number: 91789234
Start: 3572191
End: 3572814
Strand: Reverse
Name: 91789234
Synonym: Bpro_3378
Alternate gene names: NA
Gene position: 3572814-3572191 (Counterclockwise)
Preceding gene: 91789235
Following gene: 91789231
Centisome position: 68.7
GC content: 65.87
Gene sequence:
>624_bases ATGAAATCAAAACTTTTAACCGCCTCACTATTGGCGTCCGCCATGTTTGCCGGCCTGGGCGTCGCCCCGGCGATGGCGCA AACGACCTACACGCCCGGCATTGACCAGACGCAGGCGGCGATCAGCACGCGCATCCAGGAAGGTCTGGCCTCGGGCCGCA TCACGCCGTCGGAGGCGCAGGCGCTTTACCGCCGTGACCGCGAGATCCAGATGCGCGAAAACCAGTTCAAGGCCAACGGC GACGCCTCACCCCAGGAGCGCCAGCAACTGCGGGCCGACCTCAGCTTCCTGAGCGCTGAAGTCGAACGCCTGATTGCCAA CCGCGACGTGGTGGGCCAGCCCGGCTACCCCGGCTACCCCGGCTATCCCGGCAATACCCCCGGCATCGACAATCGCCAGA TCAATATCGGCGAGCGCATTGACGAGGGCGTGCGCACCGGCCGCATCACCCGGCGTGAAGCCGACAGGCTGTACAGCCGC GAGCGCCGCATTGCACGCCATGAGGCCGCCTTCAAGTCTGACGGTGTGGTGACCCAGCAGGAACGCCGCCAGCTGCGCAG TGAACTGACCGCGCTGCGCCAGGAGGTGGAGCGCATGATGCACAACCGCCGTGAACGCGGTTAG
Upstream 100 bases:
>100_bases AAGCAGCTCCAAAAAAGCGCTTGCCGACGCCGGAATGACATTCCAGCTTCTGCAAATGGCTCTTGAGTTGTTGGTTATCC AATCCAAAGCAGGAGACCCC
Downstream 100 bases:
>100_bases GAAGCACTGAGAAGGCATCAGGCGCGCGCACGCGCAGCGCTTGATGTGTCTCAAGTCGAAGGCATGAAGCCATCAAGCCA GGCAGCCTGGCCCGAGAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MKSKLLTASLLASAMFAGLGVAPAMAQTTYTPGIDQTQAAISTRIQEGLASGRITPSEAQALYRRDREIQMRENQFKANG DASPQERQQLRADLSFLSAEVERLIANRDVVGQPGYPGYPGYPGNTPGIDNRQINIGERIDEGVRTGRITRREADRLYSR ERRIARHEAAFKSDGVVTQQERRQLRSELTALRQEVERMMHNRRERG
Sequences:
>Translated_207_residues MKSKLLTASLLASAMFAGLGVAPAMAQTTYTPGIDQTQAAISTRIQEGLASGRITPSEAQALYRRDREIQMRENQFKANG DASPQERQQLRADLSFLSAEVERLIANRDVVGQPGYPGYPGYPGNTPGIDNRQINIGERIDEGVRTGRITRREADRLYSR ERRIARHEAAFKSDGVVTQQERRQLRSELTALRQEVERMMHNRRERG >Mature_207_residues MKSKLLTASLLASAMFAGLGVAPAMAQTTYTPGIDQTQAAISTRIQEGLASGRITPSEAQALYRRDREIQMRENQFKANG DASPQERQQLRADLSFLSAEVERLIANRDVVGQPGYPGYPGYPGNTPGIDNRQINIGERIDEGVRTGRITRREADRLYSR ERRIARHEAAFKSDGVVTQQERRQLRSELTALRQEVERMMHNRRERG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23284; Mature: 23284
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKLLTASLLASAMFAGLGVAPAMAQTTYTPGIDQTQAAISTRIQEGLASGRITPSEAQ CCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH ALYRRDREIQMRENQFKANGDASPQERQQLRADLSFLSAEVERLIANRDVVGQPGYPGYP HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GYPGNTPGIDNRQINIGERIDEGVRTGRITRREADRLYSRERRIARHEAAFKSDGVVTQQ CCCCCCCCCCCCEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH ERRQLRSELTALRQEVERMMHNRRERG HHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKSKLLTASLLASAMFAGLGVAPAMAQTTYTPGIDQTQAAISTRIQEGLASGRITPSEAQ CCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH ALYRRDREIQMRENQFKANGDASPQERQQLRADLSFLSAEVERLIANRDVVGQPGYPGYP HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GYPGNTPGIDNRQINIGERIDEGVRTGRITRREADRLYSRERRIARHEAAFKSDGVVTQQ CCCCCCCCCCCCEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH ERRQLRSELTALRQEVERMMHNRRERG HHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA