| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789229
Identifier: 91789229
GI number: 91789229
Start: 3566865
End: 3567449
Strand: Reverse
Name: 91789229
Synonym: Bpro_3373
Alternate gene names: NA
Gene position: 3567449-3566865 (Counterclockwise)
Preceding gene: 91789231
Following gene: 91789224
Centisome position: 68.6
GC content: 59.66
Gene sequence:
>585_bases GTGAAACCGTCTTGCCTGAATTACCGTCCATTTTCGTCGTGGCTGGGCCTTTGCAGCCTGTTGGCCCTGTTAGCGCCGCT AGCCTTGCTGGCCGGATGCGGCAGCAACGTGAAGGCCTTTCCGCTGCAGGAAAAGTTTGGCTCCACCGCGACATACTCCC GGCTGTTTGACGCCACGCCTGCGCAGACCTGCGAGGCTGCGCGGCGGGCTTTGTTGAGCCAGGGTTACATCGTCAACACC TTCAGGACCGACCTGGTGGAAGGCCAGAAGAGCTTTCAGCCCGAGCCGGAAGCTCACCTGCAGATGATGATCCGCGTGGT CTGCGCGTCCGAGAGCCTTGACGGAAAAATCAGCCTGGGTTTTGTCACCGCACTGCAGGACAGCTACGCACTGAAGAAGA GCAACAACTCCGCCAGCGTGGGTGTGGGGGCGATCGGCTCGCTCTCGCTGCCCTTCAGTTCGAGCAATGATGCGATGGTC AGGGTAGGCAGCCAGACCATCACGTCGGATGCGTTTTATGACAGCTTTTTTGACTTGCTCAAGCGCTACCTGGCCACGGA TGAGTCGGTGGGCATATCGCCCTGA
Upstream 100 bases:
>100_bases ATTCGTATTCTTGAAATAGACTGGCCCTGCAGGTCAGCCGGCTTATGCTGGCAGTGCCTGACAAACCTGAAGCGATGTTG ATGCCCGGAGTGCCTTGCCT
Downstream 100 bases:
>100_bases CGCAATGCCGGGTCCGTGGGAATGCTGCGCATGTTGAAACGTGCCCCATGGCTGTTGAGCAGCCAGTGCGGCAACACCGC TCGCCCGCCCGCCCGCCCGC
Product: putative lipoprotein
Products: NA
Alternate protein names: Lipoprotein Transmembrane; Lipoprotein Protein; Large Tegument Domain-Containing Protein
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MKPSCLNYRPFSSWLGLCSLLALLAPLALLAGCGSNVKAFPLQEKFGSTATYSRLFDATPAQTCEAARRALLSQGYIVNT FRTDLVEGQKSFQPEPEAHLQMMIRVVCASESLDGKISLGFVTALQDSYALKKSNNSASVGVGAIGSLSLPFSSSNDAMV RVGSQTITSDAFYDSFFDLLKRYLATDESVGISP
Sequences:
>Translated_194_residues MKPSCLNYRPFSSWLGLCSLLALLAPLALLAGCGSNVKAFPLQEKFGSTATYSRLFDATPAQTCEAARRALLSQGYIVNT FRTDLVEGQKSFQPEPEAHLQMMIRVVCASESLDGKISLGFVTALQDSYALKKSNNSASVGVGAIGSLSLPFSSSNDAMV RVGSQTITSDAFYDSFFDLLKRYLATDESVGISP >Mature_194_residues MKPSCLNYRPFSSWLGLCSLLALLAPLALLAGCGSNVKAFPLQEKFGSTATYSRLFDATPAQTCEAARRALLSQGYIVNT FRTDLVEGQKSFQPEPEAHLQMMIRVVCASESLDGKISLGFVTALQDSYALKKSNNSASVGVGAIGSLSLPFSSSNDAMV RVGSQTITSDAFYDSFFDLLKRYLATDESVGISP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20815; Mature: 20815
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPSCLNYRPFSSWLGLCSLLALLAPLALLAGCGSNVKAFPLQEKFGSTATYSRLFDATP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHCCHHHHHHHHCCCC AQTCEAARRALLSQGYIVNTFRTDLVEGQKSFQPEPEAHLQMMIRVVCASESLDGKISLG HHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEHH FVTALQDSYALKKSNNSASVGVGAIGSLSLPFSSSNDAMVRVGSQTITSDAFYDSFFDLL HHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCEEEECCHHHHHHHHHHHHHHHH KRYLATDESVGISP HHHHCCCCCCCCCC >Mature Secondary Structure MKPSCLNYRPFSSWLGLCSLLALLAPLALLAGCGSNVKAFPLQEKFGSTATYSRLFDATP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHCCHHHHHHHHCCCC AQTCEAARRALLSQGYIVNTFRTDLVEGQKSFQPEPEAHLQMMIRVVCASESLDGKISLG HHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEHH FVTALQDSYALKKSNNSASVGVGAIGSLSLPFSSSNDAMVRVGSQTITSDAFYDSFFDLL HHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCEEEECCHHHHHHHHHHHHHHHH KRYLATDESVGISP HHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA