| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789055
Identifier: 91789055
GI number: 91789055
Start: 3379508
End: 3380413
Strand: Direct
Name: 91789055
Synonym: Bpro_3195
Alternate gene names: NA
Gene position: 3379508-3380413 (Clockwise)
Preceding gene: 91789050
Following gene: 91789056
Centisome position: 64.99
GC content: 65.45
Gene sequence:
>906_bases GTGAATTACGCGCAACTTCTTTTTCCCGACTTTTCCCTGATTGTTTGTGGTTACCTGGTCTGCCGCTACACCGCGCTCAA CCGCACGGTCTGGGAGCAGGTGGAGAGCCTGGTCTATTACTTTCTGTTTCCGGTGTTGCTGTTCCAGTCCATCGTCAAAA GCCCGCTGGACCTGGGGGCCACGTCCAGCCTGATCGGCGCGGGCCTGCTGCTGGGGCTGTCCGGCATTGCGATGGCCTAC AGCCTGCCCTACCTCCCCTGGCTGAGCCGGCGTATTGACCCGCGCGAGCATGCGGGCAGCGCCCAGGTTGCCTTTCGCTT CAATTCCTTCATCGGCCTGGCCCTGGCAGACCGGCTGGCGGGTACCGAGGGCCAGCAGCTGATTGCCGTGCTGATCGGCG TTTGCGTGCCGTTATTCAACGTGGCCGCGGTCTGGCCCATGGTGAGGCACGCCAGGCGCGGCTTCCTGCGCGAGCTGGTG CGCAATCCCCTGATCGTGGCCACTGCTACCGCCCTTGTGGCCAACCTGCTGGGCTTCACCCTGCCCATTTGGCTGGAGCC CACGGTCACGCGCATTGGCGCGGCATCACTGGCGCTGGGCCTGCTGGCAGCCGGCGCGGGCATGCAGTTTGCCCATCTGT CGCAAGCCAAGACACTGGCGGTTGCGGTGCTGTCGATACGCCACCTGCTGCTGCCGCTGGTAGCCCTGGGCCTGACGAAA GCCTGGGGGCTGTCGGCTGCGCAGAGCACCGTCCTGCTCGCGTTTTCTGCGCTGCCGACGGCCTCCAGCGCCTATGTGCT GGCGGCGCGCATGGGCTACAACGGCGGCTATGTGGCCGGCCTGGTGACCTTGTCGACCATGCTGGGCATCGTCAGCCTGC CCTTTGCGCTGGGCGTGCTGCGTTAG
Upstream 100 bases:
>100_bases AAACAGATGGAATGGTATACGCAAGCCACATGCCTGCCTGCTGTGGATTACGCATAAGGGCAAACCCGAACACCACAGCC TTTGCGGTTATTCTCGGCGG
Downstream 100 bases:
>100_bases TGGACTGTAACGATTGAATCGGAAGCACTCTACACAGGGAAAAGTTCACTCTCTTTTCTCCGTTACAGGTCACTAGTGGA CTGTAACGTTTAAAACGGAA
Product: auxin efflux carrier
Products: NA
Alternate protein names: Permease; Membrane Transporter; Transmembrane Protein; Permease Transmembrane Protein; Efflux Protein; Membrane Transport Family
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MNYAQLLFPDFSLIVCGYLVCRYTALNRTVWEQVESLVYYFLFPVLLFQSIVKSPLDLGATSSLIGAGLLLGLSGIAMAY SLPYLPWLSRRIDPREHAGSAQVAFRFNSFIGLALADRLAGTEGQQLIAVLIGVCVPLFNVAAVWPMVRHARRGFLRELV RNPLIVATATALVANLLGFTLPIWLEPTVTRIGAASLALGLLAAGAGMQFAHLSQAKTLAVAVLSIRHLLLPLVALGLTK AWGLSAAQSTVLLAFSALPTASSAYVLAARMGYNGGYVAGLVTLSTMLGIVSLPFALGVLR
Sequences:
>Translated_301_residues MNYAQLLFPDFSLIVCGYLVCRYTALNRTVWEQVESLVYYFLFPVLLFQSIVKSPLDLGATSSLIGAGLLLGLSGIAMAY SLPYLPWLSRRIDPREHAGSAQVAFRFNSFIGLALADRLAGTEGQQLIAVLIGVCVPLFNVAAVWPMVRHARRGFLRELV RNPLIVATATALVANLLGFTLPIWLEPTVTRIGAASLALGLLAAGAGMQFAHLSQAKTLAVAVLSIRHLLLPLVALGLTK AWGLSAAQSTVLLAFSALPTASSAYVLAARMGYNGGYVAGLVTLSTMLGIVSLPFALGVLR >Mature_301_residues MNYAQLLFPDFSLIVCGYLVCRYTALNRTVWEQVESLVYYFLFPVLLFQSIVKSPLDLGATSSLIGAGLLLGLSGIAMAY SLPYLPWLSRRIDPREHAGSAQVAFRFNSFIGLALADRLAGTEGQQLIAVLIGVCVPLFNVAAVWPMVRHARRGFLRELV RNPLIVATATALVANLLGFTLPIWLEPTVTRIGAASLALGLLAAGAGMQFAHLSQAKTLAVAVLSIRHLLLPLVALGLTK AWGLSAAQSTVLLAFSALPTASSAYVLAARMGYNGGYVAGLVTLSTMLGIVSLPFALGVLR
Specific function: Unknown
COG id: COG0679
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32072; Mature: 32072
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYAQLLFPDFSLIVCGYLVCRYTALNRTVWEQVESLVYYFLFPVLLFQSIVKSPLDLGA CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC TSSLIGAGLLLGLSGIAMAYSLPYLPWLSRRIDPREHAGSAQVAFRFNSFIGLALADRLA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHCCCCCCEEEHHHHHHHHHHHHHHC GTEGQQLIAVLIGVCVPLFNVAAVWPMVRHARRGFLRELVRNPLIVATATALVANLLGFT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LPIWLEPTVTRIGAASLALGLLAAGAGMQFAHLSQAKTLAVAVLSIRHLLLPLVALGLTK CCCEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWGLSAAQSTVLLAFSALPTASSAYVLAARMGYNGGYVAGLVTLSTMLGIVSLPFALGVL HHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC R C >Mature Secondary Structure MNYAQLLFPDFSLIVCGYLVCRYTALNRTVWEQVESLVYYFLFPVLLFQSIVKSPLDLGA CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC TSSLIGAGLLLGLSGIAMAYSLPYLPWLSRRIDPREHAGSAQVAFRFNSFIGLALADRLA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHCCCCCCEEEHHHHHHHHHHHHHHC GTEGQQLIAVLIGVCVPLFNVAAVWPMVRHARRGFLRELVRNPLIVATATALVANLLGFT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LPIWLEPTVTRIGAASLALGLLAAGAGMQFAHLSQAKTLAVAVLSIRHLLLPLVALGLTK CCCEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWGLSAAQSTVLLAFSALPTASSAYVLAARMGYNGGYVAGLVTLSTMLGIVSLPFALGVL HHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA