Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789049

Identifier: 91789049

GI number: 91789049

Start: 3371901

End: 3372722

Strand: Direct

Name: 91789049

Synonym: Bpro_3189

Alternate gene names: NA

Gene position: 3371901-3372722 (Clockwise)

Preceding gene: 91789046

Following gene: 91789050

Centisome position: 64.84

GC content: 63.75

Gene sequence:

>822_bases
ATGGTTGACAAGCTACACTCCACAGATCTGCGCCAGCACGCCCTGCAGGCGCTGCTGGCGCCCGATCCACAGGAAAAAGT
AAAGCTTACCCTTGCCATACAGTCGTTTTCAGCTTCACTTTCAGTAGCAAATGATGCCGCTCTACAGGCCCCCGCCGGCC
TGCCCGGGCGCCCGGCACGGCCGGAATTGCGCTCCCATCTGGATGTGCCCAAGCGCTCCCCCTTCACCCGCGAAGGCCTG
GCTGCGCTGCTCCACGCCGTGACCCACATCGAATTCAATGCCATCAATCTGGCCCTGGACGCGGTCTGGCGCTTTGGCGG
GCTGCCGCACGCTTATTACCTGGACTGGCTGAAAGTGGCCGCCGAGGAAGCGCAACACTTCAGCCTGCTGAACGAGCACC
TGCAGGCCATGGGCTATGACTACGGCGACTTTCCCGCGCACACCGGTTTGTGGGACATGACCGAAAAAACCGAGGGCGAC
GTGCTGGCCCGCATGGCGCTGGTGCCGCGCACGCTGGAGGCTCGCGGCCTGGACGCCACCCCGCCCATGCAGGCCAAGCT
GCGCCGGGTCGGCACGCCCGATGCCTTGCGGGCCGTCGACATCCTGGACATCATCCTGCGCGATGAAATCGGGCATGTGG
CCATCGGCAACCATTGGTACCGGTTTTTGTGTGCCGAACGCGAGCTGGACCCGATCGCCACCTATGCGGTCCTGGCACAA
CAATACGGCGCCCCCCGGTTGAAGGGCCCGCTCAACCTGGAAGCCCGCCGCGACGCCGGATTTGACGCTGCTGAATTGGC
GCTACTAAGCGCAAATGCATGA

Upstream 100 bases:

>100_bases
CTTGAACAGGTGATCGTCGAAAAGGGATTGCCCCGATTGTAAGTAACCACTCGCAGTACTGTCTGCGGCGGCAAACGACG
CTATCGCCGACAATCCAGCC

Downstream 100 bases:

>100_bases
AGTTAACAGGTTTATATGTGCAAAAAGAGCTAAAGCACGCTAGACTGTAAACGTACCGAAAGGAGTTTGCGCATGATCCG
GCACCTGGTTCCAGACATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MVDKLHSTDLRQHALQALLAPDPQEKVKLTLAIQSFSASLSVANDAALQAPAGLPGRPARPELRSHLDVPKRSPFTREGL
AALLHAVTHIEFNAINLALDAVWRFGGLPHAYYLDWLKVAAEEAQHFSLLNEHLQAMGYDYGDFPAHTGLWDMTEKTEGD
VLARMALVPRTLEARGLDATPPMQAKLRRVGTPDALRAVDILDIILRDEIGHVAIGNHWYRFLCAERELDPIATYAVLAQ
QYGAPRLKGPLNLEARRDAGFDAAELALLSANA

Sequences:

>Translated_273_residues
MVDKLHSTDLRQHALQALLAPDPQEKVKLTLAIQSFSASLSVANDAALQAPAGLPGRPARPELRSHLDVPKRSPFTREGL
AALLHAVTHIEFNAINLALDAVWRFGGLPHAYYLDWLKVAAEEAQHFSLLNEHLQAMGYDYGDFPAHTGLWDMTEKTEGD
VLARMALVPRTLEARGLDATPPMQAKLRRVGTPDALRAVDILDIILRDEIGHVAIGNHWYRFLCAERELDPIATYAVLAQ
QYGAPRLKGPLNLEARRDAGFDAAELALLSANA
>Mature_273_residues
MVDKLHSTDLRQHALQALLAPDPQEKVKLTLAIQSFSASLSVANDAALQAPAGLPGRPARPELRSHLDVPKRSPFTREGL
AALLHAVTHIEFNAINLALDAVWRFGGLPHAYYLDWLKVAAEEAQHFSLLNEHLQAMGYDYGDFPAHTGLWDMTEKTEGD
VLARMALVPRTLEARGLDATPPMQAKLRRVGTPDALRAVDILDIILRDEIGHVAIGNHWYRFLCAERELDPIATYAVLAQ
QYGAPRLKGPLNLEARRDAGFDAAELALLSANA

Specific function: Unknown

COG id: COG2833

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007402
- InterPro:   IPR009078
- InterPro:   IPR011197 [H]

Pfam domain/function: PF04305 DUF455 [H]

EC number: NA

Molecular weight: Translated: 30010; Mature: 30010

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDKLHSTDLRQHALQALLAPDPQEKVKLTLAIQSFSASLSVANDAALQAPAGLPGRPAR
CCCCCCCHHHHHHHHHHHHCCCCHHHEEEEEEEEHHCCHHHHCCCHHHCCCCCCCCCCCC
PELRSHLDVPKRSPFTREGLAALLHAVTHIEFNAINLALDAVWRFGGLPHAYYLDWLKVA
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AEEAQHFSLLNEHLQAMGYDYGDFPAHTGLWDMTEKTEGDVLARMALVPRTLEARGLDAT
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCC
PPMQAKLRRVGTPDALRAVDILDIILRDEIGHVAIGNHWYRFLCAERELDPIATYAVLAQ
CCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCCCHHHHHHHHHH
QYGAPRLKGPLNLEARRDAGFDAAELALLSANA
HHCCCCCCCCCCCCCCCCCCCCHHHHHEEECCC
>Mature Secondary Structure
MVDKLHSTDLRQHALQALLAPDPQEKVKLTLAIQSFSASLSVANDAALQAPAGLPGRPAR
CCCCCCCHHHHHHHHHHHHCCCCHHHEEEEEEEEHHCCHHHHCCCHHHCCCCCCCCCCCC
PELRSHLDVPKRSPFTREGLAALLHAVTHIEFNAINLALDAVWRFGGLPHAYYLDWLKVA
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AEEAQHFSLLNEHLQAMGYDYGDFPAHTGLWDMTEKTEGDVLARMALVPRTLEARGLDAT
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCC
PPMQAKLRRVGTPDALRAVDILDIILRDEIGHVAIGNHWYRFLCAERELDPIATYAVLAQ
CCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCCCHHHHHHHHHH
QYGAPRLKGPLNLEARRDAGFDAAELALLSANA
HHCCCCCCCCCCCCCCCCCCCCHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]