| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yceI [C]
Identifier: 91789014
GI number: 91789014
Start: 3330564
End: 3331142
Strand: Direct
Name: yceI [C]
Synonym: Bpro_3154
Alternate gene names: 91789014
Gene position: 3330564-3331142 (Clockwise)
Preceding gene: 91789013
Following gene: 91789019
Centisome position: 64.05
GC content: 59.24
Gene sequence:
>579_bases ATGAAAGAAATGAAAAAACTTGTTGTAGCGCTGCTGGGCAATCTATTCCTGGCTTCGGCGTTCGCCGTCGTCGATGTGTA TGAGCGCGACCCGGACCACACCTTCGCCTGGTTCGAATTCAACCACCTGGGCTACAGCACGCAGCGCGACCGTTTCGACA AGGTCGACGCCACCATCACCCTGGACCTTGACAACCAGGTGGGCAGCGTGGAGGTGAGCATCGACGTCCAGTCGGTCAGC ACCGGCTCGCTGCTGTTCGACCAGGTCCTGCGCAGCGACATGTTCTTTGATGCCGAGCAGTTTCCCGTCATTACCTTCAA GTCGAGCCGGCTGAGCTTCGGCAAGCTCGATGACGTCACCGCCGTCGAAGGCAATCTGACTGTCAAGGGCATCACCCGGC CTGTGACCCTGACGGTCACGCACTTCAAATGCATGATGCACCCGATGCTGCGCAAACCGGCCTGCGGGCTCAACGCCACC GGCAAGGTCAAGCGCAGTGAGTTCAATCTGGGCCGGTTCGTGCCGCTGATCAGGGACGAAATCACCCTCCATGTGGTGAT GGAGGCGCTCAAGCGTTGA
Upstream 100 bases:
>100_bases GCGGAGGCACCTGGGGCGATGTTCGCGTGGTGGCCAACGAAGTGATGGTGCAGTTTCACCTGGTCCTTGAACCGTAGCGG CCCACCGTCAGGAGTTACTC
Downstream 100 bases:
>100_bases GGATGCCTGCCGCGTTCTGCGCCCTGCTGGCGACAGGCCAGCGTAGCGCCGTTCAAACGGGCTGGATCGTGATGTCCACC GTCATGGTTTCCTTGCCACC
Product: YceI
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MKEMKKLVVALLGNLFLASAFAVVDVYERDPDHTFAWFEFNHLGYSTQRDRFDKVDATITLDLDNQVGSVEVSIDVQSVS TGSLLFDQVLRSDMFFDAEQFPVITFKSSRLSFGKLDDVTAVEGNLTVKGITRPVTLTVTHFKCMMHPMLRKPACGLNAT GKVKRSEFNLGRFVPLIRDEITLHVVMEALKR
Sequences:
>Translated_192_residues MKEMKKLVVALLGNLFLASAFAVVDVYERDPDHTFAWFEFNHLGYSTQRDRFDKVDATITLDLDNQVGSVEVSIDVQSVS TGSLLFDQVLRSDMFFDAEQFPVITFKSSRLSFGKLDDVTAVEGNLTVKGITRPVTLTVTHFKCMMHPMLRKPACGLNAT GKVKRSEFNLGRFVPLIRDEITLHVVMEALKR >Mature_192_residues MKEMKKLVVALLGNLFLASAFAVVDVYERDPDHTFAWFEFNHLGYSTQRDRFDKVDATITLDLDNQVGSVEVSIDVQSVS TGSLLFDQVLRSDMFFDAEQFPVITFKSSRLSFGKLDDVTAVEGNLTVKGITRPVTLTVTHFKCMMHPMLRKPACGLNAT GKVKRSEFNLGRFVPLIRDEITLHVVMEALKR
Specific function: Unknown
COG id: COG2353
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0312 family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787295, Length=193, Percent_Identity=32.6424870466321, Blast_Score=81, Evalue=5e-17,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007372 [H]
Pfam domain/function: PF04264 YceI [H]
EC number: NA
Molecular weight: Translated: 21650; Mature: 21650
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEMKKLVVALLGNLFLASAFAVVDVYERDPDHTFAWFEFNHLGYSTQRDRFDKVDATIT CHHHHHHHHHHHHHHHHHHHHHHEEHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEE LDLDNQVGSVEVSIDVQSVSTGSLLFDQVLRSDMFFDAEQFPVITFKSSRLSFGKLDDVT EEECCCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEE AVEGNLTVKGITRPVTLTVTHFKCMMHPMLRKPACGLNATGKVKRSEFNLGRFVPLIRDE EECCCEEEEECCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHHHHH ITLHVVMEALKR HHHHHHHHHHCC >Mature Secondary Structure MKEMKKLVVALLGNLFLASAFAVVDVYERDPDHTFAWFEFNHLGYSTQRDRFDKVDATIT CHHHHHHHHHHHHHHHHHHHHHHEEHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEE LDLDNQVGSVEVSIDVQSVSTGSLLFDQVLRSDMFFDAEQFPVITFKSSRLSFGKLDDVT EEECCCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEE AVEGNLTVKGITRPVTLTVTHFKCMMHPMLRKPACGLNATGKVKRSEFNLGRFVPLIRDE EECCCEEEEECCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHHHHH ITLHVVMEALKR HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA