Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is yceI [C]

Identifier: 91789014

GI number: 91789014

Start: 3330564

End: 3331142

Strand: Direct

Name: yceI [C]

Synonym: Bpro_3154

Alternate gene names: 91789014

Gene position: 3330564-3331142 (Clockwise)

Preceding gene: 91789013

Following gene: 91789019

Centisome position: 64.05

GC content: 59.24

Gene sequence:

>579_bases
ATGAAAGAAATGAAAAAACTTGTTGTAGCGCTGCTGGGCAATCTATTCCTGGCTTCGGCGTTCGCCGTCGTCGATGTGTA
TGAGCGCGACCCGGACCACACCTTCGCCTGGTTCGAATTCAACCACCTGGGCTACAGCACGCAGCGCGACCGTTTCGACA
AGGTCGACGCCACCATCACCCTGGACCTTGACAACCAGGTGGGCAGCGTGGAGGTGAGCATCGACGTCCAGTCGGTCAGC
ACCGGCTCGCTGCTGTTCGACCAGGTCCTGCGCAGCGACATGTTCTTTGATGCCGAGCAGTTTCCCGTCATTACCTTCAA
GTCGAGCCGGCTGAGCTTCGGCAAGCTCGATGACGTCACCGCCGTCGAAGGCAATCTGACTGTCAAGGGCATCACCCGGC
CTGTGACCCTGACGGTCACGCACTTCAAATGCATGATGCACCCGATGCTGCGCAAACCGGCCTGCGGGCTCAACGCCACC
GGCAAGGTCAAGCGCAGTGAGTTCAATCTGGGCCGGTTCGTGCCGCTGATCAGGGACGAAATCACCCTCCATGTGGTGAT
GGAGGCGCTCAAGCGTTGA

Upstream 100 bases:

>100_bases
GCGGAGGCACCTGGGGCGATGTTCGCGTGGTGGCCAACGAAGTGATGGTGCAGTTTCACCTGGTCCTTGAACCGTAGCGG
CCCACCGTCAGGAGTTACTC

Downstream 100 bases:

>100_bases
GGATGCCTGCCGCGTTCTGCGCCCTGCTGGCGACAGGCCAGCGTAGCGCCGTTCAAACGGGCTGGATCGTGATGTCCACC
GTCATGGTTTCCTTGCCACC

Product: YceI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MKEMKKLVVALLGNLFLASAFAVVDVYERDPDHTFAWFEFNHLGYSTQRDRFDKVDATITLDLDNQVGSVEVSIDVQSVS
TGSLLFDQVLRSDMFFDAEQFPVITFKSSRLSFGKLDDVTAVEGNLTVKGITRPVTLTVTHFKCMMHPMLRKPACGLNAT
GKVKRSEFNLGRFVPLIRDEITLHVVMEALKR

Sequences:

>Translated_192_residues
MKEMKKLVVALLGNLFLASAFAVVDVYERDPDHTFAWFEFNHLGYSTQRDRFDKVDATITLDLDNQVGSVEVSIDVQSVS
TGSLLFDQVLRSDMFFDAEQFPVITFKSSRLSFGKLDDVTAVEGNLTVKGITRPVTLTVTHFKCMMHPMLRKPACGLNAT
GKVKRSEFNLGRFVPLIRDEITLHVVMEALKR
>Mature_192_residues
MKEMKKLVVALLGNLFLASAFAVVDVYERDPDHTFAWFEFNHLGYSTQRDRFDKVDATITLDLDNQVGSVEVSIDVQSVS
TGSLLFDQVLRSDMFFDAEQFPVITFKSSRLSFGKLDDVTAVEGNLTVKGITRPVTLTVTHFKCMMHPMLRKPACGLNAT
GKVKRSEFNLGRFVPLIRDEITLHVVMEALKR

Specific function: Unknown

COG id: COG2353

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0312 family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787295, Length=193, Percent_Identity=32.6424870466321, Blast_Score=81, Evalue=5e-17,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007372 [H]

Pfam domain/function: PF04264 YceI [H]

EC number: NA

Molecular weight: Translated: 21650; Mature: 21650

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEMKKLVVALLGNLFLASAFAVVDVYERDPDHTFAWFEFNHLGYSTQRDRFDKVDATIT
CHHHHHHHHHHHHHHHHHHHHHHEEHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEE
LDLDNQVGSVEVSIDVQSVSTGSLLFDQVLRSDMFFDAEQFPVITFKSSRLSFGKLDDVT
EEECCCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEE
AVEGNLTVKGITRPVTLTVTHFKCMMHPMLRKPACGLNATGKVKRSEFNLGRFVPLIRDE
EECCCEEEEECCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHHHHH
ITLHVVMEALKR
HHHHHHHHHHCC
>Mature Secondary Structure
MKEMKKLVVALLGNLFLASAFAVVDVYERDPDHTFAWFEFNHLGYSTQRDRFDKVDATIT
CHHHHHHHHHHHHHHHHHHHHHHEEHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEE
LDLDNQVGSVEVSIDVQSVSTGSLLFDQVLRSDMFFDAEQFPVITFKSSRLSFGKLDDVT
EEECCCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEE
AVEGNLTVKGITRPVTLTVTHFKCMMHPMLRKPACGLNATGKVKRSEFNLGRFVPLIRDE
EECCCEEEEECCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHHHHH
ITLHVVMEALKR
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA