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The map label for this gene is yohD [H]

Identifier: 91789010

GI number: 91789010

Start: 3327804

End: 3328361

Strand: Direct

Name: yohD [H]

Synonym: Bpro_3150

Alternate gene names: 91789010

Gene position: 3327804-3328361 (Clockwise)

Preceding gene: 91789009

Following gene: 91789012

Centisome position: 63.99

GC content: 58.24

Gene sequence:

>558_bases
ATGTCGCTAACCGACGTGTTGTCTCAATATGGCTACCTGGCCGTATTCGTCGGCAGCGTTCTCGAAGGCGAAACCATCCT
GATCCTGGCCGGTTTCGCAGCACATCAAGGTTACCTGTCGCTCCCCCTGGTCATCACGCTGGCATTCTGTGGCGGTACGG
TGGGTGACCAGATTTTCCTCTTGCTTGGGCGGTACTACGGCGGCCCCCTGCTTTCGCGCTTCCCACGTCTAGCCTCACGC
GCCCAACCGGTCAGTCAGTTGATACTGCGTTACCACGCCGCCCTCATCGTTGGGGTCCGTTTCATGTATGGATTTCGCAT
CGTTGGCCCGCTCATAATTGGCATGAGCGATGTGCCGGCATGGCGATTCGTGTTGCTCAACCTTCTTGGGGCTGCGCTAT
GGGCCGTGCTGATCGGCGGGGCGGGCTATCTTTTCGGCCAAGCATTGCAATCGCTGATTCCTGACCTCAAGCGGCATGAG
GAAATGGCGCTGTTGCTGATTATTGCGGTGGCTGTTCTCATCGGCTTGGTTCGTTGGCTACACGCCCGCCGTCGCTAA

Upstream 100 bases:

>100_bases
GACCTGCCCCCCCACAAGTTTGGCAGCGTGCATCTATTGGCAAATCATGGCGCGAGCCATTGACACCGGATGGGTGCGGC
GCTAGCCGGCCAGGTGACCG

Downstream 100 bases:

>100_bases
CAGCCCCCGGGTCAGGTCTTGCAATGCAACACCCCCTTGTGAAATGGGCATTAAAAGCGATCAAAAGTGGAGCGGCGCGG
CGAAGCACGGACCGCGCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MSLTDVLSQYGYLAVFVGSVLEGETILILAGFAAHQGYLSLPLVITLAFCGGTVGDQIFLLLGRYYGGPLLSRFPRLASR
AQPVSQLILRYHAALIVGVRFMYGFRIVGPLIIGMSDVPAWRFVLLNLLGAALWAVLIGGAGYLFGQALQSLIPDLKRHE
EMALLLIIAVAVLIGLVRWLHARRR

Sequences:

>Translated_185_residues
MSLTDVLSQYGYLAVFVGSVLEGETILILAGFAAHQGYLSLPLVITLAFCGGTVGDQIFLLLGRYYGGPLLSRFPRLASR
AQPVSQLILRYHAALIVGVRFMYGFRIVGPLIIGMSDVPAWRFVLLNLLGAALWAVLIGGAGYLFGQALQSLIPDLKRHE
EMALLLIIAVAVLIGLVRWLHARRR
>Mature_184_residues
SLTDVLSQYGYLAVFVGSVLEGETILILAGFAAHQGYLSLPLVITLAFCGGTVGDQIFLLLGRYYGGPLLSRFPRLASRA
QPVSQLILRYHAALIVGVRFMYGFRIVGPLIIGMSDVPAWRFVLLNLLGAALWAVLIGGAGYLFGQALQSLIPDLKRHEE
MALLLIIAVAVLIGLVRWLHARRR

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI87082056, Length=159, Percent_Identity=44.0251572327044, Blast_Score=141, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 20191; Mature: 20059

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTDVLSQYGYLAVFVGSVLEGETILILAGFAAHQGYLSLPLVITLAFCGGTVGDQIFL
CCHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHCCCCHHHHHHHHHHHHCCCHHHHHHH
LLGRYYGGPLLSRFPRLASRAQPVSQLILRYHAALIVGVRFMYGFRIVGPLIIGMSDVPA
HHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
WRFVLLNLLGAALWAVLIGGAGYLFGQALQSLIPDLKRHEEMALLLIIAVAVLIGLVRWL
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HARRR
HHHCC
>Mature Secondary Structure 
SLTDVLSQYGYLAVFVGSVLEGETILILAGFAAHQGYLSLPLVITLAFCGGTVGDQIFL
CHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHCCCCHHHHHHHHHHHHCCCHHHHHHH
LLGRYYGGPLLSRFPRLASRAQPVSQLILRYHAALIVGVRFMYGFRIVGPLIIGMSDVPA
HHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
WRFVLLNLLGAALWAVLIGGAGYLFGQALQSLIPDLKRHEEMALLLIIAVAVLIGLVRWL
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HARRR
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]