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The map label for this gene is yecS [H]

Identifier: 91788992

GI number: 91788992

Start: 3308159

End: 3308827

Strand: Direct

Name: yecS [H]

Synonym: Bpro_3132

Alternate gene names: 91788992

Gene position: 3308159-3308827 (Clockwise)

Preceding gene: 91788991

Following gene: 91788996

Centisome position: 63.62

GC content: 61.43

Gene sequence:

>669_bases
ATGGACATGACTGCTGTAACCCAGTTGCTGGGGGACGCTTTACCACTGATGCTCAAGGGCGCGGCATGGACGCTGCTGCT
GGCCGTGGCATCGGTTTTTTTTGGCGCCATCATCGGCACTTTTGTGGCCATCACACGGTTGGCGAAGATGCCCGGCCTGG
CGCGGTTTGCCGCGCTGTATGTCAGCTGCATGCGCGGCACGCCGCTGCTGGTGCAGCTGTTTGTGATTTACTTCGGCCTG
CCCAGCATTGGCATCCAGTTCGACCCGATCACGGCGGGCATCCTGGGGCTGAGCCTCAACGTCGGCGCGTACCTGTCGGA
AACGATTCGTGGGGCGATCAATGGCGTTGAACACGGGCAGTGGAATGCCGCCCGCAGCCTGGGCCTCACGCAGGCGCAAA
CGCTGCGCCATGTAATCGGGCCGCAAGCCTTGCGCCTGGCCGTTCCCAGCCTGTCCAACAGCCTGATCAGCCTGATCAAG
GACACCTCGCTGGTCTCGGTGATTGCCGTGGGTGAACTGATGCTGGCCACCAAGGAAGTCATTGCCACCACCTTCCAGCC
CTTCCCGTTGTACCTGGCGGCGGCCGCGATTTACTGGGCCATGAGCGCATCGTTTGAAACGCTGCAGAAAAAGCTGGAAG
TGCGGCTGAACCGGAGCTATTTGCGCTAG

Upstream 100 bases:

>100_bases
ATGAGAACCCAGTAACATTCATCCAGCCGTGCGCTCCAGGCGCACCCGATGTCTGAAGCACCCCGGCATGAAGCCGGGGT
TTTTATTTGTGGAGACTGCC

Downstream 100 bases:

>100_bases
CGTGGCGCCGGGATGCCGGGCGGATCGGCATCAGCAGCCGGCCCGGCCTGAATCCATACCTCGGTGCCGGGCTCCACGAG
GTCGAACAGCTCCACGATGT

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MDMTAVTQLLGDALPLMLKGAAWTLLLAVASVFFGAIIGTFVAITRLAKMPGLARFAALYVSCMRGTPLLVQLFVIYFGL
PSIGIQFDPITAGILGLSLNVGAYLSETIRGAINGVEHGQWNAARSLGLTQAQTLRHVIGPQALRLAVPSLSNSLISLIK
DTSLVSVIAVGELMLATKEVIATTFQPFPLYLAAAAIYWAMSASFETLQKKLEVRLNRSYLR

Sequences:

>Translated_222_residues
MDMTAVTQLLGDALPLMLKGAAWTLLLAVASVFFGAIIGTFVAITRLAKMPGLARFAALYVSCMRGTPLLVQLFVIYFGL
PSIGIQFDPITAGILGLSLNVGAYLSETIRGAINGVEHGQWNAARSLGLTQAQTLRHVIGPQALRLAVPSLSNSLISLIK
DTSLVSVIAVGELMLATKEVIATTFQPFPLYLAAAAIYWAMSASFETLQKKLEVRLNRSYLR
>Mature_222_residues
MDMTAVTQLLGDALPLMLKGAAWTLLLAVASVFFGAIIGTFVAITRLAKMPGLARFAALYVSCMRGTPLLVQLFVIYFGL
PSIGIQFDPITAGILGLSLNVGAYLSETIRGAINGVEHGQWNAARSLGLTQAQTLRHVIGPQALRLAVPSLSNSLISLIK
DTSLVSVIAVGELMLATKEVIATTFQPFPLYLAAAAIYWAMSASFETLQKKLEVRLNRSYLR

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=217, Percent_Identity=47.926267281106, Blast_Score=210, Evalue=5e-56,
Organism=Escherichia coli, GI1787030, Length=207, Percent_Identity=35.7487922705314, Blast_Score=124, Evalue=4e-30,
Organism=Escherichia coli, GI1787087, Length=219, Percent_Identity=33.3333333333333, Blast_Score=117, Evalue=5e-28,
Organism=Escherichia coli, GI1788645, Length=206, Percent_Identity=33.9805825242718, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1788646, Length=220, Percent_Identity=32.2727272727273, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI87082239, Length=205, Percent_Identity=35.1219512195122, Blast_Score=98, Evalue=4e-22,
Organism=Escherichia coli, GI1786873, Length=211, Percent_Identity=31.2796208530806, Blast_Score=91, Evalue=4e-20,
Organism=Escherichia coli, GI1787086, Length=173, Percent_Identity=32.3699421965318, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1786874, Length=163, Percent_Identity=31.2883435582822, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI48994930, Length=120, Percent_Identity=37.5, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 23812; Mature: 23812

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMTAVTQLLGDALPLMLKGAAWTLLLAVASVFFGAIIGTFVAITRLAKMPGLARFAALY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VSCMRGTPLLVQLFVIYFGLPSIGIQFDPITAGILGLSLNVGAYLSETIRGAINGVEHGQ
HHHHCCCHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC
WNAARSLGLTQAQTLRHVIGPQALRLAVPSLSNSLISLIKDTSLVSVIAVGELMLATKEV
CHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IATTFQPFPLYLAAAAIYWAMSASFETLQKKLEVRLNRSYLR
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDMTAVTQLLGDALPLMLKGAAWTLLLAVASVFFGAIIGTFVAITRLAKMPGLARFAALY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VSCMRGTPLLVQLFVIYFGLPSIGIQFDPITAGILGLSLNVGAYLSETIRGAINGVEHGQ
HHHHCCCHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC
WNAARSLGLTQAQTLRHVIGPQALRLAVPSLSNSLISLIKDTSLVSVIAVGELMLATKEV
CHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IATTFQPFPLYLAAAAIYWAMSASFETLQKKLEVRLNRSYLR
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]