| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is grpE
Identifier: 91788985
GI number: 91788985
Start: 3298511
End: 3299071
Strand: Direct
Name: grpE
Synonym: Bpro_3125
Alternate gene names: 91788985
Gene position: 3298511-3299071 (Clockwise)
Preceding gene: 91788984
Following gene: 91788986
Centisome position: 63.43
GC content: 62.03
Gene sequence:
>561_bases ATGTCTGAAAATACACAACCCGAGCAAAATCAACCACTTACCGGAGCGCCTAGCCCCGAAGAGCTGGAAGCCGCGCAAGC CGCCAACGAGTTTGACGCGCTGACCCAGGCCCAGGCTGAACTGGTCACCCTGCAGGCCAAAAACACCGAGCTGGCCGACA GCTACCTGCGCGCCAAGGCCGAGACGGAAAACGCCCGCCGCCGCGCTGACGACGAAATTGCCAAGGCACGCAAATTTGCG CTGGAAAGCTTTGCGGAAAGCCTGCTTCCCGTTGTCGACAGCCTCGAGGCCGGCCTGGCACACAAGGACGCAACGCCCGA ACAGATCCGGGAGGGTGCGGACGCCACGCTCAAGCAACTCAAAACCACCCTCGAGCGCAACAAGATCGTGGAAATCAACC CCGCCAGCGGAAGCCGGTTTGACCCGCACCAGCACCAGGCGATCAGCATGGTGCCCGCCGAGCAGGAAGCCAACACCGTA GTCAGCGTGCTGCAAAAAGGCTACCTGATTTCCGACCGCGTGCTGCGCCCCGCCCTGGTCACCGTAACCGCGCCGAAATA A
Upstream 100 bases:
>100_bases CACGCCGAAAATTTCGCCCTCAAAACCGAATCCCTTGTCTTGAAAAGGGCTTTGTAACCCCCAGTTAACCCCCTTGTTAG CTTAAACCTTGTCTTCAAGC
Downstream 100 bases:
>100_bases ACGCATAAATCAGGCTGAGGCACTTGAACTCGTACAAGTTATCCACAAGTCATCAACATGCTCATTCACAGCGACTGAGC CATCAGCCACACCACCATCC
Product: heat shock protein GrpE
Products: NA
Alternate protein names: HSP-70 cofactor
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MSENTQPEQNQPLTGAPSPEELEAAQAANEFDALTQAQAELVTLQAKNTELADSYLRAKAETENARRRADDEIAKARKFA LESFAESLLPVVDSLEAGLAHKDATPEQIREGADATLKQLKTTLERNKIVEINPASGSRFDPHQHQAISMVPAEQEANTV VSVLQKGYLISDRVLRPALVTVTAPK
Sequences:
>Translated_186_residues MSENTQPEQNQPLTGAPSPEELEAAQAANEFDALTQAQAELVTLQAKNTELADSYLRAKAETENARRRADDEIAKARKFA LESFAESLLPVVDSLEAGLAHKDATPEQIREGADATLKQLKTTLERNKIVEINPASGSRFDPHQHQAISMVPAEQEANTV VSVLQKGYLISDRVLRPALVTVTAPK >Mature_185_residues SENTQPEQNQPLTGAPSPEELEAAQAANEFDALTQAQAELVTLQAKNTELADSYLRAKAETENARRRADDEIAKARKFAL ESFAESLLPVVDSLEAGLAHKDATPEQIREGADATLKQLKTTLERNKIVEINPASGSRFDPHQHQAISMVPAEQEANTVV SVLQKGYLISDRVLRPALVTVTAPK
Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with dnaK and grpE. It is the nucleotide exchange factor for dnaK and may function as a thermosensor. Unfolded
COG id: COG0576
COG function: function code O; Molecular chaperone GrpE (heat shock protein)
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the grpE family
Homologues:
Organism=Homo sapiens, GI24308295, Length=153, Percent_Identity=33.9869281045752, Blast_Score=84, Evalue=7e-17, Organism=Homo sapiens, GI40255109, Length=152, Percent_Identity=30.9210526315789, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1788967, Length=138, Percent_Identity=43.4782608695652, Blast_Score=99, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17552458, Length=167, Percent_Identity=32.3353293413174, Blast_Score=80, Evalue=6e-16, Organism=Saccharomyces cerevisiae, GI6324806, Length=164, Percent_Identity=32.9268292682927, Blast_Score=76, Evalue=3e-15, Organism=Drosophila melanogaster, GI24653432, Length=173, Percent_Identity=33.5260115606936, Blast_Score=84, Evalue=5e-17,
Paralogues:
None
Copy number: 2359 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 4,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): GRPE_POLSJ (Q128K3)
Other databases:
- EMBL: CP000316 - RefSeq: YP_549937.1 - ProteinModelPortal: Q128K3 - SMR: Q128K3 - STRING: Q128K3 - GeneID: 4014205 - GenomeReviews: CP000316_GR - KEGG: pol:Bpro_3125 - NMPDR: fig|296591.1.peg.2878 - eggNOG: COG0576 - HOGENOM: HBG732630 - OMA: NLHQAVM - PhylomeDB: Q128K3 - ProtClustDB: PRK14139 - BioCyc: PSP296591:BPRO_3125-MONOMER - GO: GO:0005739 - HAMAP: MF_01151 - InterPro: IPR000740 - InterPro: IPR013805 - InterPro: IPR009012 - Gene3D: G3DSA:3.90.20.20 - Gene3D: G3DSA:2.30.22.10 - PANTHER: PTHR21237 - PRINTS: PR00773
Pfam domain/function: PF01025 GrpE; SSF51064 GrpE_head
EC number: NA
Molecular weight: Translated: 20254; Mature: 20123
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: PS01071 GRPE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENTQPEQNQPLTGAPSPEELEAAQAANEFDALTQAQAELVTLQAKNTELADSYLRAKA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHH ETENARRRADDEIAKARKFALESFAESLLPVVDSLEAGLAHKDATPEQIREGADATLKQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHH KTTLERNKIVEINPASGSRFDPHQHQAISMVPAEQEANTVVSVLQKGYLISDRVLRPALV HHHHHHCCEEEEECCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHCCEEE TVTAPK EEECCC >Mature Secondary Structure SENTQPEQNQPLTGAPSPEELEAAQAANEFDALTQAQAELVTLQAKNTELADSYLRAKA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHH ETENARRRADDEIAKARKFALESFAESLLPVVDSLEAGLAHKDATPEQIREGADATLKQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHH KTTLERNKIVEINPASGSRFDPHQHQAISMVPAEQEANTVVSVLQKGYLISDRVLRPALV HHHHHHCCEEEEECCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHCCEEE TVTAPK EEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA