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The map label for this gene is omp32 [H]

Identifier: 91788977

GI number: 91788977

Start: 3290914

End: 3292041

Strand: Direct

Name: omp32 [H]

Synonym: Bpro_3117

Alternate gene names: 91788977

Gene position: 3290914-3292041 (Clockwise)

Preceding gene: 91788976

Following gene: 91788978

Centisome position: 63.28

GC content: 59.31

Gene sequence:

>1128_bases
ATGAAAATTTCCTCCCTTATCACCCTGACCGGACTGGCCGGACTGGTCGCCACAGGTGCTGCTCAAGCTCAAAGTGTCAG
CCTTTACGGCATCATCGATGCCGGCGTCGAGTCTGTCAGCAACGTGGCATCAGCCGGCGGCCGCATCACGCGCATGCCCT
CCAATACCGGCATCCTTCCTTCTCGGGTGGGCATGCGTGGCACAGAAGATCTTGGCGCTGGCTTGAGCGCCATCTACACG
CTTGAAATGGGTTTTGCCCCGGACACAGGCGCTTCGGGCCAAGGTGGCCGTCTATTCGGGCGCCAGTCGACGGTGGGACT
CAGTGGTAACTGGGGCGCGGTCACGCTGGGCCGTCAATGGACCATGCTGTTCTGGTCCCTGCTGGATTCGGATATTGTGG
GGCCCAGCATCTATGGACTCGGCTCTCTGGACAACTACATCCCCAATTCACGCATCGATAATTCAATTGCGTACAAAGGC
AAATTCAGCGACTTCACCGTAGGCGCTACCTACAGCCTGGGCCGTGACACCGTCAATGCAGGTCCATCGCCTGCCGGCAC
CAATTGCCCAGGCGAAAGCGGGGCTGATTCCAAGGCATGCCGCGAGTGGTCGGCCATGGTGAAATACGACACCAAGACCT
GGGGCGCAGCATTGGCTTATGACGAACTGAACGGCCGCACGCCTGCCAGCGCTACGGATGTGGTGCTGCCTGCCGGCCTG
ACCAGCAGTTCCAAATCCGACTCCCGGCTGATGGTGAACGGCTACGTGAACCTGGCCAGCGTCAAAGTCGGCGGTGGTGT
CATTCGCCGTAACAACGACGGCAGCGCGACGCGACCCAAAAGCGACCTTTGGTACGTCGGAGCCTCTTACCCAGTCTCTC
CGGCCTGGACGATTGACGGAACTCTCGCCAAGCTGAACTACAAGAACGTCGACAACTTTGACTCCACCCTGCTGGCGGTG
CGATCGCTGTACAAGTTATCGAAGCGCACGACCTTGTACGCTCAAATCGGCACGATTCGCAACGATAGCCAGACCAACGT
TTCTGTCAGTGGCGGTGCACCTGGCAGCAACCCCGCTTTGGGTGGATCGCAGACCGGGACGATGGTGGGCATCAACCACA
AGTTCTAA

Upstream 100 bases:

>100_bases
GGGAACTTGTGAATCCGCTGAAAGATTCAGTTGCCACTGAGCAACGACATTCCGGGAATGGCCTGGTCGAAAAATCAACC
ACTACTACCACGAGACAAGC

Downstream 100 bases:

>100_bases
GCGCAGAGACCTTTGCGCATGAGCTACCAGCCACATCTACACGACATCTGCTTCATTCTTCACGATGTGCTCAAGGCCCC
TGCGCAGCTGCAGGCGCTTG

Product: porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MKISSLITLTGLAGLVATGAAQAQSVSLYGIIDAGVESVSNVASAGGRITRMPSNTGILPSRVGMRGTEDLGAGLSAIYT
LEMGFAPDTGASGQGGRLFGRQSTVGLSGNWGAVTLGRQWTMLFWSLLDSDIVGPSIYGLGSLDNYIPNSRIDNSIAYKG
KFSDFTVGATYSLGRDTVNAGPSPAGTNCPGESGADSKACREWSAMVKYDTKTWGAALAYDELNGRTPASATDVVLPAGL
TSSSKSDSRLMVNGYVNLASVKVGGGVIRRNNDGSATRPKSDLWYVGASYPVSPAWTIDGTLAKLNYKNVDNFDSTLLAV
RSLYKLSKRTTLYAQIGTIRNDSQTNVSVSGGAPGSNPALGGSQTGTMVGINHKF

Sequences:

>Translated_375_residues
MKISSLITLTGLAGLVATGAAQAQSVSLYGIIDAGVESVSNVASAGGRITRMPSNTGILPSRVGMRGTEDLGAGLSAIYT
LEMGFAPDTGASGQGGRLFGRQSTVGLSGNWGAVTLGRQWTMLFWSLLDSDIVGPSIYGLGSLDNYIPNSRIDNSIAYKG
KFSDFTVGATYSLGRDTVNAGPSPAGTNCPGESGADSKACREWSAMVKYDTKTWGAALAYDELNGRTPASATDVVLPAGL
TSSSKSDSRLMVNGYVNLASVKVGGGVIRRNNDGSATRPKSDLWYVGASYPVSPAWTIDGTLAKLNYKNVDNFDSTLLAV
RSLYKLSKRTTLYAQIGTIRNDSQTNVSVSGGAPGSNPALGGSQTGTMVGINHKF
>Mature_375_residues
MKISSLITLTGLAGLVATGAAQAQSVSLYGIIDAGVESVSNVASAGGRITRMPSNTGILPSRVGMRGTEDLGAGLSAIYT
LEMGFAPDTGASGQGGRLFGRQSTVGLSGNWGAVTLGRQWTMLFWSLLDSDIVGPSIYGLGSLDNYIPNSRIDNSIAYKG
KFSDFTVGATYSLGRDTVNAGPSPAGTNCPGESGADSKACREWSAMVKYDTKTWGAALAYDELNGRTPASATDVVLPAGL
TSSSKSDSRLMVNGYVNLASVKVGGGVIRRNNDGSATRPKSDLWYVGASYPVSPAWTIDGTLAKLNYKNVDNFDSTLLAV
RSLYKLSKRTTLYAQIGTIRNDSQTNVSVSGGAPGSNPALGGSQTGTMVGINHKF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 38916; Mature: 38916

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISSLITLTGLAGLVATGAAQAQSVSLYGIIDAGVESVSNVASAGGRITRMPSNTGILP
CCCHHEEHHHHHHHHHHCCCCCCCEEEEEEEEHHHHHHHHHHHHCCCEEEECCCCCCCCC
SRVGMRGTEDLGAGLSAIYTLEMGFAPDTGASGQGGRLFGRQSTVGLSGNWGAVTLGRQW
CCCCCCCCHHHCCCCEEEEEEEECCCCCCCCCCCCCEEECCCCEEEECCCCCEEEECCHH
TMLFWSLLDSDIVGPSIYGLGSLDNYIPNSRIDNSIAYKGKFSDFTVGATYSLGRDTVNA
HHHHHHHHHHCCCCCCEECCCCHHHCCCCCCCCCCEEECCCCCCEEEEEEEECCCCCCCC
GPSPAGTNCPGESGADSKACREWSAMVKYDTKTWGAALAYDELNGRTPASATDVVLPAGL
CCCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCCEEEEECCCCCCCCCCCCCEEEECCC
TSSSKSDSRLMVNGYVNLASVKVGGGVIRRNNDGSATRPKSDLWYVGASYPVSPAWTIDG
CCCCCCCCEEEEEEEEEEEEEEECCEEEEECCCCCCCCCCCCEEEEECCCCCCCCEEECC
TLAKLNYKNVDNFDSTLLAVRSLYKLSKRTTLYAQIGTIRNDSQTNVSVSGGAPGSNPAL
EEEEEECCCCCCHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCEEEEECCCCCCCCCC
GGSQTGTMVGINHKF
CCCCCCEEEEECCCC
>Mature Secondary Structure
MKISSLITLTGLAGLVATGAAQAQSVSLYGIIDAGVESVSNVASAGGRITRMPSNTGILP
CCCHHEEHHHHHHHHHHCCCCCCCEEEEEEEEHHHHHHHHHHHHCCCEEEECCCCCCCCC
SRVGMRGTEDLGAGLSAIYTLEMGFAPDTGASGQGGRLFGRQSTVGLSGNWGAVTLGRQW
CCCCCCCCHHHCCCCEEEEEEEECCCCCCCCCCCCCEEECCCCEEEECCCCCEEEECCHH
TMLFWSLLDSDIVGPSIYGLGSLDNYIPNSRIDNSIAYKGKFSDFTVGATYSLGRDTVNA
HHHHHHHHHHCCCCCCEECCCCHHHCCCCCCCCCCEEECCCCCCEEEEEEEECCCCCCCC
GPSPAGTNCPGESGADSKACREWSAMVKYDTKTWGAALAYDELNGRTPASATDVVLPAGL
CCCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCCEEEEECCCCCCCCCCCCCEEEECCC
TSSSKSDSRLMVNGYVNLASVKVGGGVIRRNNDGSATRPKSDLWYVGASYPVSPAWTIDG
CCCCCCCCEEEEEEEEEEEEEEECCEEEEECCCCCCCCCCCCEEEEECCCCCCCCEEECC
TLAKLNYKNVDNFDSTLLAVRSLYKLSKRTTLYAQIGTIRNDSQTNVSVSGGAPGSNPAL
EEEEEECCCCCCHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCEEEEECCCCCCCCCC
GGSQTGTMVGINHKF
CCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]