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The map label for this gene is bfrD [H]

Identifier: 91788907

GI number: 91788907

Start: 3213285

End: 3215498

Strand: Direct

Name: bfrD [H]

Synonym: Bpro_3047

Alternate gene names: 91788907

Gene position: 3213285-3215498 (Clockwise)

Preceding gene: 91788906

Following gene: 91788908

Centisome position: 61.79

GC content: 59.67

Gene sequence:

>2214_bases
ATGCTGGCTGTGTCCGTTTCCAGCTGGGCACAAAACGTCACGCCAACTCCCAGCGCCACACCCGCTGCATCGTCTACTCA
GGCTGAAGGTAAAACCCTGGCTCCCGTGGTGATCAAGGAAAAAGCTGAAGCCGAAGAAGGCAAGGACTCTGTGCGCGCCA
CCCGCTCCACCATCGGCAAAGGCAACCAGGAACTACGCGACATACCCCAGTCTGTCACGGTGGTCACGGAAAAACTGATT
GACGACCGCAATCTGGATACCGTGAAAGAGGCCCTGAAAAATACCGCGGGCATCACTTTTCTGGCGGCAGAAGGCGGCGA
AGAAGATATTCGCTTGCGCGGCTTTGCGTTGCAAAGCACTGGCGACGTTTTTGTCGATGGCATTCGTGACCCGGCGTTCT
ACGAACGTGACACGTTCAACCTGGACCGCCTTGAGTTGCTGCGCGGCTCAGCATCCATGTTGTTTGGCCGCGGCTCCACC
GGCGGTGCGGTCAACCAGGTCAGCAAATTGCCACGCCTGATCAATGAAAACGAGATTTCCACCACCCTGGGCAGTCACAA
CTACAAGCGCGTGACGGGCGACTTCAACATCAAGACCGGCGAGGACGCCGCACTGCGCATCAATGCCATGGCTACCAAAG
CCGACAACAACGGCGCGGGCAGCAGCATCGACAAAAAGGGCCTGGCGGTGTCTTACCGCCTGGGCATCGGCACTGCCGAC
GAGTTCCTTGCCAGCCTGTACTACCTTGACAACAACAACGGCATAAACTACGGCCTGCCGTGGATTCGCCCCAACGCCAG
TTCACCAGCCCGCGACACGACCATCCTGCCGGTGGATCCCAAAAACTATTACGGCGCAGCCAGTGACTACAACGCCGGCA
GCGCCACCATGGCAACGCTCGGCCACATACACCGCTTCAGCAGCGACAGCGAACTGAAAACACAATTGCGCGTCGGAAAA
TTCGAGCGCGACCAGCGCGCCAGCACCATCCGTCTTGGCGCAGCGGCACTGCAACCCGGCGGCGTGGCTGCCACGCTGGC
CAGCTTCGGCCCGAACACCGTATTGACGCGCGGCACCCAGCTCAAGATCCAGAACCTGGATACCGTGAATCTGCAAAGCG
ACTTCAGCACCAAGTTTGCTGCTTTGGGTGTGCAACACGAGTTGCTGACCGGTGTCGACTTTTCCCAGGAAAAAAAGAGC
GTGTATGCCGCCCGAACCGCTGCCCAGGGCGGTGTCAACCTGACCAAGCCCAACACGCTTGCCGGCACGCCCGACGACGG
CGCCTCGATCCTGGAATCCCGCCGCGTGCTGCGCACCTCCAGCGACTTCTCTTCCGATGGCGTTGGCGTTTATGCGCAAG
ACCTGATCCAGATTGCGCCGCACTGGAAACTGCTGGCCGGCCTGCGCTATGACCACATGAAGGGCAACTACAACACCTTC
AGCATACCGGCTGCAGCCGCAGGCCCTGTCACGACCACGTCGTACAGCCAGAGCATCGGCGAGTGGAGCAAGCGCGCTGG
CGTGCTGTACCAGCCCAACCCGCTGCACTCATACCACGTCTCCTACGGCACATCGTTCAACACGTCAGGCGATACCTATT
CGTACAGCGCGGCCACGGTGAACACACCGCCGGAATCCAGCCGCAACTTCGAAATTGGTGCCAAGCTGGATACGGCAGAC
AAGCGCTTTACCACCCGCCTGGCCGTGTTTCATTCGACCAAGCTGCACGAACGCAACACTGACCCGCTCTTGAATATTGC
TGTTTTGTCAGGCAAGCGCCACGCGGCGGGTGCGGAGATCGACATCACCGGACGCCTCACGCCGCAATGGGAAATCTACG
GCTCCTACATGTGGATGCCCAGCGCCCGGATCGATATCGGGGCAGAAGGCGCTGAAGGCCAGGGTTCGCGCCCATCGCTC
ACACCACGCCACAGTGGCACCGTGTGGACCACTTACCAGGTCACGCCCAAAGTGCGTGTGGGTGGTGGCCTGAACTTCCG
CGGTAAACAAACACCAAACCGCAACCCGGGCTGGGAAGTGCCGAGCTTCGTGACGGCTGATTTGATGGCCGAATACGCCT
TGAGCGACCAGATCACGGTAAAGGCCAATCTGTCCAACGTCAGCAACAAACTGTACGCTGACGCACTGTATTCAGGTCAC
TACATTTCCGGTGCTGGCCGCATCTTCCAGGTGACTGGCACCGTGAAGTTCTGA

Upstream 100 bases:

>100_bases
CTCTGCGCGCAATAAGAAATCCCGTCTGTCGCCCGTTGCCATCGCTACAACGAACACGTCGGCATCGTCGAGCCCAGCCC
TCTTGCCTCTTGGCGCGTTG

Downstream 100 bases:

>100_bases
TTCTTCAGAGCTTTCAGTTTCTTCAAGGCTTTTGCCACCTCACTCCGGGGTGGCTTTTTTACTTGCATAACCACCCCCAT
GCTGCTCACTCTTCCCGACA

Product: TonB-dependent siderophore receptor

Products: NA

Alternate protein names: Virulence-associated outer membrane protein Vir-90 [H]

Number of amino acids: Translated: 737; Mature: 737

Protein sequence:

>737_residues
MLAVSVSSWAQNVTPTPSATPAASSTQAEGKTLAPVVIKEKAEAEEGKDSVRATRSTIGKGNQELRDIPQSVTVVTEKLI
DDRNLDTVKEALKNTAGITFLAAEGGEEDIRLRGFALQSTGDVFVDGIRDPAFYERDTFNLDRLELLRGSASMLFGRGST
GGAVNQVSKLPRLINENEISTTLGSHNYKRVTGDFNIKTGEDAALRINAMATKADNNGAGSSIDKKGLAVSYRLGIGTAD
EFLASLYYLDNNNGINYGLPWIRPNASSPARDTTILPVDPKNYYGAASDYNAGSATMATLGHIHRFSSDSELKTQLRVGK
FERDQRASTIRLGAAALQPGGVAATLASFGPNTVLTRGTQLKIQNLDTVNLQSDFSTKFAALGVQHELLTGVDFSQEKKS
VYAARTAAQGGVNLTKPNTLAGTPDDGASILESRRVLRTSSDFSSDGVGVYAQDLIQIAPHWKLLAGLRYDHMKGNYNTF
SIPAAAAGPVTTTSYSQSIGEWSKRAGVLYQPNPLHSYHVSYGTSFNTSGDTYSYSAATVNTPPESSRNFEIGAKLDTAD
KRFTTRLAVFHSTKLHERNTDPLLNIAVLSGKRHAAGAEIDITGRLTPQWEIYGSYMWMPSARIDIGAEGAEGQGSRPSL
TPRHSGTVWTTYQVTPKVRVGGGLNFRGKQTPNRNPGWEVPSFVTADLMAEYALSDQITVKANLSNVSNKLYADALYSGH
YISGAGRIFQVTGTVKF

Sequences:

>Translated_737_residues
MLAVSVSSWAQNVTPTPSATPAASSTQAEGKTLAPVVIKEKAEAEEGKDSVRATRSTIGKGNQELRDIPQSVTVVTEKLI
DDRNLDTVKEALKNTAGITFLAAEGGEEDIRLRGFALQSTGDVFVDGIRDPAFYERDTFNLDRLELLRGSASMLFGRGST
GGAVNQVSKLPRLINENEISTTLGSHNYKRVTGDFNIKTGEDAALRINAMATKADNNGAGSSIDKKGLAVSYRLGIGTAD
EFLASLYYLDNNNGINYGLPWIRPNASSPARDTTILPVDPKNYYGAASDYNAGSATMATLGHIHRFSSDSELKTQLRVGK
FERDQRASTIRLGAAALQPGGVAATLASFGPNTVLTRGTQLKIQNLDTVNLQSDFSTKFAALGVQHELLTGVDFSQEKKS
VYAARTAAQGGVNLTKPNTLAGTPDDGASILESRRVLRTSSDFSSDGVGVYAQDLIQIAPHWKLLAGLRYDHMKGNYNTF
SIPAAAAGPVTTTSYSQSIGEWSKRAGVLYQPNPLHSYHVSYGTSFNTSGDTYSYSAATVNTPPESSRNFEIGAKLDTAD
KRFTTRLAVFHSTKLHERNTDPLLNIAVLSGKRHAAGAEIDITGRLTPQWEIYGSYMWMPSARIDIGAEGAEGQGSRPSL
TPRHSGTVWTTYQVTPKVRVGGGLNFRGKQTPNRNPGWEVPSFVTADLMAEYALSDQITVKANLSNVSNKLYADALYSGH
YISGAGRIFQVTGTVKF
>Mature_737_residues
MLAVSVSSWAQNVTPTPSATPAASSTQAEGKTLAPVVIKEKAEAEEGKDSVRATRSTIGKGNQELRDIPQSVTVVTEKLI
DDRNLDTVKEALKNTAGITFLAAEGGEEDIRLRGFALQSTGDVFVDGIRDPAFYERDTFNLDRLELLRGSASMLFGRGST
GGAVNQVSKLPRLINENEISTTLGSHNYKRVTGDFNIKTGEDAALRINAMATKADNNGAGSSIDKKGLAVSYRLGIGTAD
EFLASLYYLDNNNGINYGLPWIRPNASSPARDTTILPVDPKNYYGAASDYNAGSATMATLGHIHRFSSDSELKTQLRVGK
FERDQRASTIRLGAAALQPGGVAATLASFGPNTVLTRGTQLKIQNLDTVNLQSDFSTKFAALGVQHELLTGVDFSQEKKS
VYAARTAAQGGVNLTKPNTLAGTPDDGASILESRRVLRTSSDFSSDGVGVYAQDLIQIAPHWKLLAGLRYDHMKGNYNTF
SIPAAAAGPVTTTSYSQSIGEWSKRAGVLYQPNPLHSYHVSYGTSFNTSGDTYSYSAATVNTPPESSRNFEIGAKLDTAD
KRFTTRLAVFHSTKLHERNTDPLLNIAVLSGKRHAAGAEIDITGRLTPQWEIYGSYMWMPSARIDIGAEGAEGQGSRPSL
TPRHSGTVWTTYQVTPKVRVGGGLNFRGKQTPNRNPGWEVPSFVTADLMAEYALSDQITVKANLSNVSNKLYADALYSGH
YISGAGRIFQVTGTVKF

Specific function: Probably involved in iron transport [H]

COG id: COG4774

COG function: function code P; Outer membrane receptor for monomeric catechols

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1787024, Length=763, Percent_Identity=26.343381389253, Blast_Score=214, Evalue=2e-56,
Organism=Escherichia coli, GI1787344, Length=767, Percent_Identity=23.5984354628422, Blast_Score=135, Evalue=1e-32,
Organism=Escherichia coli, GI1786344, Length=746, Percent_Identity=22.5201072386059, Blast_Score=116, Evalue=5e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 79268; Mature: 79268

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAVSVSSWAQNVTPTPSATPAASSTQAEGKTLAPVVIKEKAEAEEGKDSVRATRSTIGK
CEEEEECHHHCCCCCCCCCCCCCCCCCCCCCEECCEEEECCHHHHCCHHHHHHHHHHHCC
GNQELRDIPQSVTVVTEKLIDDRNLDTVKEALKNTAGITFLAAEGGEEDIRLRGFALQST
CCHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEEECCC
GDVFVDGIRDPAFYERDTFNLDRLELLRGSASMLFGRGSTGGAVNQVSKLPRLINENEIS
CCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCHH
TTLGSHNYKRVTGDFNIKTGEDAALRINAMATKADNNGAGSSIDKKGLAVSYRLGIGTAD
HHHCCCCCEEEECEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCHH
EFLASLYYLDNNNGINYGLPWIRPNASSPARDTTILPVDPKNYYGAASDYNAGSATMATL
HHHEEEEEEECCCCCEECCCEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHH
GHIHRFSSDSELKTQLRVGKFERDQRASTIRLGAAALQPGGVAATLASFGPNTVLTRGTQ
HHHHHCCCCHHHHHHHHHCCCCCCCCCCEEEECHHHCCCCCCEEHHHHCCCCCEEECCCE
LKIQNLDTVNLQSDFSTKFAALGVQHELLTGVDFSQEKKSVYAARTAAQGGVNLTKPNTL
EEEECCCEEEECCCCCCHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCEECCCCCC
AGTPDDGASILESRRVLRTSSDFSSDGVGVYAQDLIQIAPHWKLLAGLRYDHMKGNYNTF
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHCCEEECCCCCCCEE
SIPAAAAGPVTTTSYSQSIGEWSKRAGVLYQPNPLHSYHVSYGTSFNTSGDTYSYSAATV
ECCCCCCCCCEECHHHHHHHHHHHHCCEEECCCCCCEEEEEECCEECCCCCEEEEEEEEE
NTPPESSRNFEIGAKLDTADKRFTTRLAVFHSTKLHERNTDPLLNIAVLSGKRHAAGAEI
CCCCCCCCCEEECEEECCCCHHHHEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCEE
DITGRLTPQWEIYGSYMWMPSARIDIGAEGAEGQGSRPSLTPRHSGTVWTTYQVTPKVRV
EEEECCCCCEEEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEE
GGGLNFRGKQTPNRNPGWEVPSFVTADLMAEYALSDQITVKANLSNVSNKLYADALYSGH
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCE
YISGAGRIFQVTGTVKF
EECCCCEEEEEEEEECC
>Mature Secondary Structure
MLAVSVSSWAQNVTPTPSATPAASSTQAEGKTLAPVVIKEKAEAEEGKDSVRATRSTIGK
CEEEEECHHHCCCCCCCCCCCCCCCCCCCCCEECCEEEECCHHHHCCHHHHHHHHHHHCC
GNQELRDIPQSVTVVTEKLIDDRNLDTVKEALKNTAGITFLAAEGGEEDIRLRGFALQST
CCHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEEECCC
GDVFVDGIRDPAFYERDTFNLDRLELLRGSASMLFGRGSTGGAVNQVSKLPRLINENEIS
CCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCHH
TTLGSHNYKRVTGDFNIKTGEDAALRINAMATKADNNGAGSSIDKKGLAVSYRLGIGTAD
HHHCCCCCEEEECEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCHH
EFLASLYYLDNNNGINYGLPWIRPNASSPARDTTILPVDPKNYYGAASDYNAGSATMATL
HHHEEEEEEECCCCCEECCCEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHH
GHIHRFSSDSELKTQLRVGKFERDQRASTIRLGAAALQPGGVAATLASFGPNTVLTRGTQ
HHHHHCCCCHHHHHHHHHCCCCCCCCCCEEEECHHHCCCCCCEEHHHHCCCCCEEECCCE
LKIQNLDTVNLQSDFSTKFAALGVQHELLTGVDFSQEKKSVYAARTAAQGGVNLTKPNTL
EEEECCCEEEECCCCCCHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCEECCCCCC
AGTPDDGASILESRRVLRTSSDFSSDGVGVYAQDLIQIAPHWKLLAGLRYDHMKGNYNTF
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHCCEEECCCCCCCEE
SIPAAAAGPVTTTSYSQSIGEWSKRAGVLYQPNPLHSYHVSYGTSFNTSGDTYSYSAATV
ECCCCCCCCCEECHHHHHHHHHHHHCCEEECCCCCCEEEEEECCEECCCCCEEEEEEEEE
NTPPESSRNFEIGAKLDTADKRFTTRLAVFHSTKLHERNTDPLLNIAVLSGKRHAAGAEI
CCCCCCCCCEEECEEECCCCHHHHEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCEE
DITGRLTPQWEIYGSYMWMPSARIDIGAEGAEGQGSRPSLTPRHSGTVWTTYQVTPKVRV
EEEECCCCCEEEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEE
GGGLNFRGKQTPNRNPGWEVPSFVTADLMAEYALSDQITVKANLSNVSNKLYADALYSGH
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCE
YISGAGRIFQVTGTVKF
EECCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12910271; 10079522 [H]