Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is ydiA [C]

Identifier: 91788903

GI number: 91788903

Start: 3208743

End: 3209564

Strand: Direct

Name: ydiA [C]

Synonym: Bpro_3043

Alternate gene names: 91788903

Gene position: 3208743-3209564 (Clockwise)

Preceding gene: 91788898

Following gene: 91788904

Centisome position: 61.7

GC content: 60.83

Gene sequence:

>822_bases
ATGTCCCAACGCACCGTGTTTTTCATCTCCGACGGCACTGGCATTACCGCCGAAACCTTTGGTAACGCCATCCTGGCGCA
GTTTGAGTTCAAGCCCCGCCATGTCCGGCTGCCGTTTATCGACAGCGTGGACAAGGCCCACCAGGCCATCCGGCAGATCA
ACCACGCGGCGGAAGTGGAAGGCAAGCGGCCCATTGTTTTTACGACGCTGGTGAACATGGAGATCCTGGCCGTCATCAAA
ACCCACTGCAACGGCATGCTGCTGGACATGTTTGGCATGTTTGTGGCGCCGCTTGAGAGCGAGCTGGGCATCAAGTCCAA
TCACCGGGTGGGCCGCTTTTCGGATGCCTCCAAAAGCAAGGAATACGACGACCGGATCGAGGCGATCAACTTCTCGCTGG
CCCACGACGACGGCCAGAGCAACAAGGACCTGGCGGGCTCTGACGTGATTCTGGTGGGCGTGAGCCGCAGCGGCAAGACG
CCGACCTCGCTGTACCTCGCCATGCAGTACGGGCTCAAGGCCTCCAACTACCCGCTGATTCCGGAAGACTTTGAGCGCCG
CCAGCTACCGCCTGCGCTGGTGCCGCACCGCAAGAAAATCTTTGGCCTGACGATTGCTCCCGAGCGCCTGAGCCAGATCC
GCAACGAACGCCGGCCCCACTCCACCTACGCCAGCCTGGCCAATTGCCGCCATGAAATCCACGAGGCCGAAGCGATGATG
CGGCGCGAAGGCATACGCTGGCTGTCCACCACCACCAAGTCCATCGAAGAGATTTCCACCACCATCCTGCAGGAAATCCG
GCCGGAGCGGCTGGAGTACTGA

Upstream 100 bases:

>100_bases
ATGGCGTGACAATCGGGATAATTGCCACGATTGTAGGGGCCTGCGGCCGGATGTGCCGCGTCAGCCTTTCACCCAGCTTT
CAATCAGACAGACGCCCACC

Downstream 100 bases:

>100_bases
CTGCCGAAATCGATTTTCCAGCTCACCCGGAGCTGCAGTCGCTATCATTTTTGCAGCTCGTTACGCCCACTGATATCGGC
ATACAGCCACATTTTCGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MSQRTVFFISDGTGITAETFGNAILAQFEFKPRHVRLPFIDSVDKAHQAIRQINHAAEVEGKRPIVFTTLVNMEILAVIK
THCNGMLLDMFGMFVAPLESELGIKSNHRVGRFSDASKSKEYDDRIEAINFSLAHDDGQSNKDLAGSDVILVGVSRSGKT
PTSLYLAMQYGLKASNYPLIPEDFERRQLPPALVPHRKKIFGLTIAPERLSQIRNERRPHSTYASLANCRHEIHEAEAMM
RREGIRWLSTTTKSIEEISTTILQEIRPERLEY

Sequences:

>Translated_273_residues
MSQRTVFFISDGTGITAETFGNAILAQFEFKPRHVRLPFIDSVDKAHQAIRQINHAAEVEGKRPIVFTTLVNMEILAVIK
THCNGMLLDMFGMFVAPLESELGIKSNHRVGRFSDASKSKEYDDRIEAINFSLAHDDGQSNKDLAGSDVILVGVSRSGKT
PTSLYLAMQYGLKASNYPLIPEDFERRQLPPALVPHRKKIFGLTIAPERLSQIRNERRPHSTYASLANCRHEIHEAEAMM
RREGIRWLSTTTKSIEEISTTILQEIRPERLEY
>Mature_272_residues
SQRTVFFISDGTGITAETFGNAILAQFEFKPRHVRLPFIDSVDKAHQAIRQINHAAEVEGKRPIVFTTLVNMEILAVIKT
HCNGMLLDMFGMFVAPLESELGIKSNHRVGRFSDASKSKEYDDRIEAINFSLAHDDGQSNKDLAGSDVILVGVSRSGKTP
TSLYLAMQYGLKASNYPLIPEDFERRQLPPALVPHRKKIFGLTIAPERLSQIRNERRPHSTYASLANCRHEIHEAEAMMR
REGIRWLSTTTKSIEEISTTILQEIRPERLEY

Specific function: Unknown

COG id: COG1806

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pyruvate, phosphate dikinase regulatory protein family [H]

Homologues:

Organism=Escherichia coli, GI1787995, Length=263, Percent_Identity=46.7680608365019, Blast_Score=234, Evalue=5e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005177 [H]

Pfam domain/function: PF03618 DUF299 [H]

EC number: NA

Molecular weight: Translated: 30894; Mature: 30763

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQRTVFFISDGTGITAETFGNAILAQFEFKPRHVRLPFIDSVDKAHQAIRQINHAAEVE
CCCCEEEEEECCCCCCHHHHCCEEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHCC
GKRPIVFTTLVNMEILAVIKTHCNGMLLDMFGMFVAPLESELGIKSNHRVGRFSDASKSK
CCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCC
EYDDRIEAINFSLAHDDGQSNKDLAGSDVILVGVSRSGKTPTSLYLAMQYGLKASNYPLI
HHHHHHHHHEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHEEEEEECCCCCCCCCCC
PEDFERRQLPPALVPHRKKIFGLTIAPERLSQIRNERRPHSTYASLANCRHEIHEAEAMM
CCHHHHHCCCCCCCCCCHHEEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
RREGIRWLSTTTKSIEEISTTILQEIRPERLEY
HHHCCHHHHHHHHHHHHHHHHHHHHHCHHHCCC
>Mature Secondary Structure 
SQRTVFFISDGTGITAETFGNAILAQFEFKPRHVRLPFIDSVDKAHQAIRQINHAAEVE
CCCEEEEEECCCCCCHHHHCCEEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHCC
GKRPIVFTTLVNMEILAVIKTHCNGMLLDMFGMFVAPLESELGIKSNHRVGRFSDASKSK
CCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCC
EYDDRIEAINFSLAHDDGQSNKDLAGSDVILVGVSRSGKTPTSLYLAMQYGLKASNYPLI
HHHHHHHHHEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHEEEEEECCCCCCCCCCC
PEDFERRQLPPALVPHRKKIFGLTIAPERLSQIRNERRPHSTYASLANCRHEIHEAEAMM
CCHHHHHCCCCCCCCCCHHEEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
RREGIRWLSTTTKSIEEISTTILQEIRPERLEY
HHHCCHHHHHHHHHHHHHHHHHHHHHCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA