| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788837
Identifier: 91788837
GI number: 91788837
Start: 3134286
End: 3134852
Strand: Direct
Name: 91788837
Synonym: Bpro_2977
Alternate gene names: NA
Gene position: 3134286-3134852 (Clockwise)
Preceding gene: 91788836
Following gene: 91788838
Centisome position: 60.27
GC content: 50.44
Gene sequence:
>567_bases GTGGGATATAGGGAGGAGAAAATGAATTTTTCTATGTGGCACGTTATTGTTATTGTGTCTGTTGGGTTGGCGATTTGGGG CGCGATCGCACTAAGTAGATGGTCGCGCCGTGCCGAGAAGCCGGGAGGTGTGGGGGGGTGGCTCGCTTTGCTCATAGCCG GATTAATATTTTTGGGGCCGCTATTTAGCGCGGGACGCATCAGCAGCGATTTTATGGATACCGAGAGCAAATATCCAAAG CTACTTACGGTAGAGGCGTGGTTGAATTACAAAAACACAGCATGGATATTCTTTGGAATCGCAACACTTTTTGGGATATA TGCGGGCTGGTGCTTGGCACGTAGGAGAATCTCGACAAGTCCCTTCATAGCAATCGCGGCCATCTGGATTCTTGGGCCGC TTCTTAGCGTAATCCTTGCAATCATCTTGCCGATAATTTTCTTTGGTGCCACAGGCTTGGACGCAGCGGGAGCCGGTGCG CTTGCTGTCTCGGGACTTCCAGCGGTCGCATGGACCTTATATTTGCTGAAATCCAAACGGGTGAAAGCGCTATATCACCA AGTGTAG
Upstream 100 bases:
>100_bases CAGCACGAACAGTGGGTCTACGACGGCGGCTACCTGTACTTTGAAAGTGGAATTCTGAAAACGATTCAACATTAGCGACG GACCCGCACCCACGCGGCCC
Downstream 100 bases:
>100_bases AGGGATGGGAAAAGCCATCCTTCTATTGGCGACCCTTGTCCTATCTGTGGGAGCAGACGCGGAATTAAGCGCAGCCAGAG CGCCAAGATCGAGTTCAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MGYREEKMNFSMWHVIVIVSVGLAIWGAIALSRWSRRAEKPGGVGGWLALLIAGLIFLGPLFSAGRISSDFMDTESKYPK LLTVEAWLNYKNTAWIFFGIATLFGIYAGWCLARRRISTSPFIAIAAIWILGPLLSVILAIILPIIFFGATGLDAAGAGA LAVSGLPAVAWTLYLLKSKRVKALYHQV
Sequences:
>Translated_188_residues MGYREEKMNFSMWHVIVIVSVGLAIWGAIALSRWSRRAEKPGGVGGWLALLIAGLIFLGPLFSAGRISSDFMDTESKYPK LLTVEAWLNYKNTAWIFFGIATLFGIYAGWCLARRRISTSPFIAIAAIWILGPLLSVILAIILPIIFFGATGLDAAGAGA LAVSGLPAVAWTLYLLKSKRVKALYHQV >Mature_187_residues GYREEKMNFSMWHVIVIVSVGLAIWGAIALSRWSRRAEKPGGVGGWLALLIAGLIFLGPLFSAGRISSDFMDTESKYPKL LTVEAWLNYKNTAWIFFGIATLFGIYAGWCLARRRISTSPFIAIAAIWILGPLLSVILAIILPIIFFGATGLDAAGAGAL AVSGLPAVAWTLYLLKSKRVKALYHQV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20503; Mature: 20371
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYREEKMNFSMWHVIVIVSVGLAIWGAIALSRWSRRAEKPGGVGGWLALLIAGLIFLGP CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LFSAGRISSDFMDTESKYPKLLTVEAWLNYKNTAWIFFGIATLFGIYAGWCLARRRISTS HHCCCCCCHHHHCCCCCCCCEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC PFIAIAAIWILGPLLSVILAIILPIIFFGATGLDAAGAGALAVSGLPAVAWTLYLLKSKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHH VKALYHQV HHHHHHCC >Mature Secondary Structure GYREEKMNFSMWHVIVIVSVGLAIWGAIALSRWSRRAEKPGGVGGWLALLIAGLIFLGP CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LFSAGRISSDFMDTESKYPKLLTVEAWLNYKNTAWIFFGIATLFGIYAGWCLARRRISTS HHCCCCCCHHHHCCCCCCCCEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC PFIAIAAIWILGPLLSVILAIILPIIFFGATGLDAAGAGALAVSGLPAVAWTLYLLKSKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHH VKALYHQV HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA