| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91788791
Identifier: 91788791
GI number: 91788791
Start: 3093646
End: 3094275
Strand: Direct
Name: 91788791
Synonym: Bpro_2931
Alternate gene names: NA
Gene position: 3093646-3094275 (Clockwise)
Preceding gene: 91788788
Following gene: 91788792
Centisome position: 59.49
GC content: 64.13
Gene sequence:
>630_bases ATGTCTACCCCCTCAACCACAAGCAACACCCCCACCATCGGGATCATCGGCGCCGGAGCCATCGGCTCGGCATTTGCCAA AGCCCTGGCCCGCCAAGGCATCCATGCCACGCTGTCCAACAGCCGCGGCCCGGACTCGCTCAAGGACATCGTGCGCGAAC TTGGCCCCACCATCCACGCCGGCACCGTCAAGGAGGCTGCCTCAAAAGACATCGTGCTGGTAGCCGTCAACTGGGGCCGC CTGCCTGCCGCGCTGGCCGGTTTGCCCAACTTTGGCGGCCGTGTCGTCATTGATGCCAACAACGCGGTCGAAATACCTTC GCTCACGCCCGTAGACCTGAACGGCCGCGTGTCCAGCGAAGTGTTTGCCGAGCTGGTGCCCGGCGCGCGCGTGGTGAAGG CCTTTAACCACCTTGTCGCGCAACTGCTGGCCACAGACCCCGCCGACCAGGGCGGCAAGCGCGTGCTGTTTTTCTCGGGG GACGATGTCAAGGCAAAGGCGACCGTGGCTGCACTGATCAGCCTGCTCGGATTCTCGGGAATCGACCTCGGCTCTTTGGC TGTGGGTGGACGCCTGGCGCAGTTTCCCGGCGGCCCGCTGCCAATTCTCAACCTTGTGCATTTCAGCTGA
Upstream 100 bases:
>100_bases ATCTTAAAGCAATGCTTGAAAATAATTCAATCAATTACTGTCTTATCAAAAGGCAATCAAAAACCCATCATTCACCCATC AACAACCAAGGAGTGAATTT
Downstream 100 bases:
>100_bases AGTCAATGCGCTGGCGCCCGGCACAAGATACACGGCCGGGTCCGCAGCTTCTTCTGCTCACAATCCCGGCCGGCCGGCGC CTGACTGGAGGCCGCGCCTC
Product: NADP oxidoreductase, coenzyme F420-dependent
Products: NA
Alternate protein names: Oxidoreductase; 2-Dehydropantoate 2-Reductase; Myo-Inositol 2-Dehydrogenase Protein; Polyketide Synthase
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MSTPSTTSNTPTIGIIGAGAIGSAFAKALARQGIHATLSNSRGPDSLKDIVRELGPTIHAGTVKEAASKDIVLVAVNWGR LPAALAGLPNFGGRVVIDANNAVEIPSLTPVDLNGRVSSEVFAELVPGARVVKAFNHLVAQLLATDPADQGGKRVLFFSG DDVKAKATVAALISLLGFSGIDLGSLAVGGRLAQFPGGPLPILNLVHFS
Sequences:
>Translated_209_residues MSTPSTTSNTPTIGIIGAGAIGSAFAKALARQGIHATLSNSRGPDSLKDIVRELGPTIHAGTVKEAASKDIVLVAVNWGR LPAALAGLPNFGGRVVIDANNAVEIPSLTPVDLNGRVSSEVFAELVPGARVVKAFNHLVAQLLATDPADQGGKRVLFFSG DDVKAKATVAALISLLGFSGIDLGSLAVGGRLAQFPGGPLPILNLVHFS >Mature_208_residues STPSTTSNTPTIGIIGAGAIGSAFAKALARQGIHATLSNSRGPDSLKDIVRELGPTIHAGTVKEAASKDIVLVAVNWGRL PAALAGLPNFGGRVVIDANNAVEIPSLTPVDLNGRVSSEVFAELVPGARVVKAFNHLVAQLLATDPADQGGKRVLFFSGD DVKAKATVAALISLLGFSGIDLGSLAVGGRLAQFPGGPLPILNLVHFS
Specific function: Unknown
COG id: COG2085
COG function: function code R; Predicted dinucleotide-binding enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI56549145, Length=193, Percent_Identity=30.5699481865285, Blast_Score=68, Evalue=6e-12, Organism=Homo sapiens, GI59853425, Length=193, Percent_Identity=30.5699481865285, Blast_Score=68, Evalue=6e-12, Organism=Homo sapiens, GI56549147, Length=193, Percent_Identity=30.5699481865285, Blast_Score=68, Evalue=6e-12, Organism=Homo sapiens, GI100815815, Length=201, Percent_Identity=26.865671641791, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21273; Mature: 21142
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPSTTSNTPTIGIIGAGAIGSAFAKALARQGIHATLSNSRGPDSLKDIVRELGPTIHA CCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCEEC GTVKEAASKDIVLVAVNWGRLPAALAGLPNFGGRVVIDANNAVEIPSLTPVDLNGRVSSE CCHHHHCCCCEEEEEEECCCHHHHHHCCCCCCCEEEEECCCEEECCCCCCCCCCCCHHHH VFAELVPGARVVKAFNHLVAQLLATDPADQGGKRVLFFSGDDVKAKATVAALISLLGFSG HHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCC IDLGSLAVGGRLAQFPGGPLPILNLVHFS CCCCHHHHCCEECCCCCCCHHHHHHEECC >Mature Secondary Structure STPSTTSNTPTIGIIGAGAIGSAFAKALARQGIHATLSNSRGPDSLKDIVRELGPTIHA CCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCEEC GTVKEAASKDIVLVAVNWGRLPAALAGLPNFGGRVVIDANNAVEIPSLTPVDLNGRVSSE CCHHHHCCCCEEEEEEECCCHHHHHHCCCCCCCEEEEECCCEEECCCCCCCCCCCCHHHH VFAELVPGARVVKAFNHLVAQLLATDPADQGGKRVLFFSGDDVKAKATVAALISLLGFSG HHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCC IDLGSLAVGGRLAQFPGGPLPILNLVHFS CCCCHHHHCCEECCCCCCCHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA