| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788787
Identifier: 91788787
GI number: 91788787
Start: 3090123
End: 3090587
Strand: Direct
Name: 91788787
Synonym: Bpro_2927
Alternate gene names: NA
Gene position: 3090123-3090587 (Clockwise)
Preceding gene: 91788786
Following gene: 91788788
Centisome position: 59.42
GC content: 63.23
Gene sequence:
>465_bases ATGAACTACTGGCTCATGAAATCCGAACCCGAGGAATGCTCGGTAGACGACGCGTTGGCTGCGCCCAAAGCCACGGTGCC CTGGGTGGGCGTGCGCAACTACCAGGCGCGCAACTTCATGCGCGATGCGATGCGGGTGGGCGATGGCGTGCTGTTCTACC ATTCCAGTTGTGCCGAACCGGGCATCGTCGGCATTGCGCAGGTGGCGTCCACGCCCTACCCTGACCCGACACAGTTTGAC CCGAAGTCGCCTTATTACGACGCCAAGTCAAAACCGGAGGAGCCGCGCTGGCTGCTGGTGGATGTGCAGGTGCTGCGCAA GACGCGCAACCTCGCCCTGCCCGAGCTGCGCGCCCATGAGGATCTGCAGGGCCTGGTGGTACTGCGCAAGGGCAACCGCT TGTCGATCACGCCGGTTGAGCCGAAGCACTGGCGGGTCATCTGTAAACTGCTGGGCATCCCGTAG
Upstream 100 bases:
>100_bases GGCTGCGGTACAGGATCTGCGCCGCGCACTGATGCGTACTGACGTGTAGGGATGGCGCCCTTATTCGTGCAGATCGTGAA ACCTTGACACCCACAAAACC
Downstream 100 bases:
>100_bases CGCTAAGACCAAGCTGCGGATGACCTTTGCTTCGGTGGGCGCGAGGAGGCGGATGATGCGTGCATTCCTGGCCAGCCCCT ATCAACACGTCAAAGACAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MNYWLMKSEPEECSVDDALAAPKATVPWVGVRNYQARNFMRDAMRVGDGVLFYHSSCAEPGIVGIAQVASTPYPDPTQFD PKSPYYDAKSKPEEPRWLLVDVQVLRKTRNLALPELRAHEDLQGLVVLRKGNRLSITPVEPKHWRVICKLLGIP
Sequences:
>Translated_154_residues MNYWLMKSEPEECSVDDALAAPKATVPWVGVRNYQARNFMRDAMRVGDGVLFYHSSCAEPGIVGIAQVASTPYPDPTQFD PKSPYYDAKSKPEEPRWLLVDVQVLRKTRNLALPELRAHEDLQGLVVLRKGNRLSITPVEPKHWRVICKLLGIP >Mature_154_residues MNYWLMKSEPEECSVDDALAAPKATVPWVGVRNYQARNFMRDAMRVGDGVLFYHSSCAEPGIVGIAQVASTPYPDPTQFD PKSPYYDAKSKPEEPRWLLVDVQVLRKTRNLALPELRAHEDLQGLVVLRKGNRLSITPVEPKHWRVICKLLGIP
Specific function: Unknown
COG id: COG2947
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI83267861, Length=166, Percent_Identity=43.3734939759036, Blast_Score=133, Evalue=8e-32, Organism=Homo sapiens, GI40806221, Length=166, Percent_Identity=43.3734939759036, Blast_Score=133, Evalue=8e-32, Organism=Homo sapiens, GI7661804, Length=166, Percent_Identity=43.3734939759036, Blast_Score=133, Evalue=8e-32, Organism=Homo sapiens, GI83267859, Length=107, Percent_Identity=48.5981308411215, Blast_Score=115, Evalue=2e-26, Organism=Homo sapiens, GI40806219, Length=107, Percent_Identity=48.5981308411215, Blast_Score=115, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17428; Mature: 17428
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYWLMKSEPEECSVDDALAAPKATVPWVGVRNYQARNFMRDAMRVGDGVLFYHSSCAEP CCEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCC GIVGIAQVASTPYPDPTQFDPKSPYYDAKSKPEEPRWLLVDVQVLRKTRNLALPELRAHE CCEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCHHCCC DLQGLVVLRKGNRLSITPVEPKHWRVICKLLGIP CCCEEEEEECCCEEEEECCCCHHHHHHHHHHCCC >Mature Secondary Structure MNYWLMKSEPEECSVDDALAAPKATVPWVGVRNYQARNFMRDAMRVGDGVLFYHSSCAEP CCEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCC GIVGIAQVASTPYPDPTQFDPKSPYYDAKSKPEEPRWLLVDVQVLRKTRNLALPELRAHE CCEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCHHCCC DLQGLVVLRKGNRLSITPVEPKHWRVICKLLGIP CCCEEEEEECCCEEEEECCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA