| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788584
Identifier: 91788584
GI number: 91788584
Start: 2869547
End: 2869822
Strand: Reverse
Name: 91788584
Synonym: Bpro_2722
Alternate gene names: NA
Gene position: 2869822-2869547 (Counterclockwise)
Preceding gene: 91788585
Following gene: 91788578
Centisome position: 55.19
GC content: 66.67
Gene sequence:
>276_bases TTGAGCCGGCTCGGACTGACCCGGGACAAGATCTACAAGACTGTGGCGCGGCAGCTCCACGGCACGGTGCCTTGCTGGGT CTGCGGCGAGCATGTGACCCCCCAGGCGGCGACCCTCGAGCACATTCAGCCCCTGAGCTCAGGTGGCAACAGCCATGCGG AGAACCTGGCCATCAGCCACGAGATCTGCAATGGCCAGCGGCATGCGGCGGGCACTGTGCCTGCCTCTGCTGGGTCTCCC GGACAGGTGTTCAGGCGGGCCGCCACAGAGTCCTGA
Upstream 100 bases:
>100_bases CGCTGGACACCCGGCCCGCCAAGCTTGACTAAGGCACCGCATCGATGACCGCGGTTGAGGTACTGCCGGCCGGCTTGCGT CCCTGCATGAGGGCGACGTC
Downstream 100 bases:
>100_bases AAAAGCCGTGTGCTGCTGATGGCTCTGATGGCTCTGATGGCTGATGGTGGCCAGCTCACGCGGTAGCTTGCCAGGGCGCG CTACGCCGCAAGTTCGAGTT
Product: HNH nuclease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MSRLGLTRDKIYKTVARQLHGTVPCWVCGEHVTPQAATLEHIQPLSSGGNSHAENLAISHEICNGQRHAAGTVPASAGSP GQVFRRAATES
Sequences:
>Translated_91_residues MSRLGLTRDKIYKTVARQLHGTVPCWVCGEHVTPQAATLEHIQPLSSGGNSHAENLAISHEICNGQRHAAGTVPASAGSP GQVFRRAATES >Mature_90_residues SRLGLTRDKIYKTVARQLHGTVPCWVCGEHVTPQAATLEHIQPLSSGGNSHAENLAISHEICNGQRHAAGTVPASAGSPG QVFRRAATES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9627; Mature: 9496
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLGLTRDKIYKTVARQLHGTVPCWVCGEHVTPQAATLEHIQPLSSGGNSHAENLAISH CCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHH EICNGQRHAAGTVPASAGSPGQVFRRAATES HHHCCCCCCCCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure SRLGLTRDKIYKTVARQLHGTVPCWVCGEHVTPQAATLEHIQPLSSGGNSHAENLAISH CCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHH EICNGQRHAAGTVPASAGSPGQVFRRAATES HHHCCCCCCCCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA