| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is pyrH [H]
Identifier: 91788555
GI number: 91788555
Start: 2834194
End: 2834904
Strand: Reverse
Name: pyrH [H]
Synonym: Bpro_2693
Alternate gene names: 91788555
Gene position: 2834904-2834194 (Counterclockwise)
Preceding gene: 91788556
Following gene: 91788554
Centisome position: 54.51
GC content: 60.2
Gene sequence:
>711_bases ATGCCAGCCTACAAGCGGATCTTGTTAAAACTGTCAGGTGAGGCCTTGATGGGGGATGATGCCTTTGGCATCAACCACGC CACCATCGTGCGCATGGTGGAAGAAATTGCCGAGGTCACCCGCATGGGCGTCCAGGTGGCGGTGGTGATCGGCGGCGGCA ACATCTTCCGCGGCGTGGCGGGTGGCTCGGTCGGCATGGACCGGGCGACTGCCGACTACATGGGTATGCTGGCGACCGTG ATGAACGCGCTGGCTCTGGGCGACACCATGGACAAGGCGGGCCTGATTGCCCGCGTCATGTCGGCCATTGGCATCGAGCG CGTGGTCGAACCTTATGTGCGGCCCAAGGCGCTGCAGTACCTGGAAGAAGGCAAGGTCGTCATTTTCGCGGCCGGCACAG GCAATCCTTTCTTTACGACCGACACGGCCGCTGCGCTGCGCGGTGCCGAAATCGGGGCTGAAATCGTCCTGAAGGCGACC AAAGTCGATGGCGTGTACACGGCGGATCCGAAGAAGGATCCACGCGCAACGCGCTACACCAACATCACTTTTGATGAGGC GATGGGCAAGAACCTCGAAGTCATGGACGCTACAGCGTTTGCCCTGTGCCGCGACCAGAAGCTGCCGATCAAGGTTTTTA GTATTTTCAAGCACGGAGCGCTCAAACGCGTGGTGCAGGGTGAGGACGAAGGAACCCTGGTTCACGTTTGA
Upstream 100 bases:
>100_bases AGTTGCGGCCCAGATAGCTGCAGCCAAAGCAGCCTAAGCAACTCAGCCCTGCCGGAAGGCCGCTAAACTTCAGATCAACC CAATTACGGAGAGCCCTCAC
Downstream 100 bases:
>100_bases TTCCGGCTCCCCGGCCATCGGCCGTGTTTTCATATTTCTTGGACTTTTTGCAGATAACAATCCGGAGATTCGACCATGAG CATTGTTGAAGTGAAGCAGA
Product: uridylate kinase
Products: NA
Alternate protein names: UK; Uridine monophosphate kinase; UMP kinase; UMPK [H]
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MPAYKRILLKLSGEALMGDDAFGINHATIVRMVEEIAEVTRMGVQVAVVIGGGNIFRGVAGGSVGMDRATADYMGMLATV MNALALGDTMDKAGLIARVMSAIGIERVVEPYVRPKALQYLEEGKVVIFAAGTGNPFFTTDTAAALRGAEIGAEIVLKAT KVDGVYTADPKKDPRATRYTNITFDEAMGKNLEVMDATAFALCRDQKLPIKVFSIFKHGALKRVVQGEDEGTLVHV
Sequences:
>Translated_236_residues MPAYKRILLKLSGEALMGDDAFGINHATIVRMVEEIAEVTRMGVQVAVVIGGGNIFRGVAGGSVGMDRATADYMGMLATV MNALALGDTMDKAGLIARVMSAIGIERVVEPYVRPKALQYLEEGKVVIFAAGTGNPFFTTDTAAALRGAEIGAEIVLKAT KVDGVYTADPKKDPRATRYTNITFDEAMGKNLEVMDATAFALCRDQKLPIKVFSIFKHGALKRVVQGEDEGTLVHV >Mature_235_residues PAYKRILLKLSGEALMGDDAFGINHATIVRMVEEIAEVTRMGVQVAVVIGGGNIFRGVAGGSVGMDRATADYMGMLATVM NALALGDTMDKAGLIARVMSAIGIERVVEPYVRPKALQYLEEGKVVIFAAGTGNPFFTTDTAAALRGAEIGAEIVLKATK VDGVYTADPKKDPRATRYTNITFDEAMGKNLEVMDATAFALCRDQKLPIKVFSIFKHGALKRVVQGEDEGTLVHV
Specific function: Catalyzes the reversible phosphorylation of UMP to UDP [H]
COG id: COG0528
COG function: function code F; Uridylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UMP kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786367, Length=233, Percent_Identity=58.3690987124464, Blast_Score=276, Evalue=1e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR011817 - InterPro: IPR015963 [H]
Pfam domain/function: PF00696 AA_kinase [H]
EC number: =2.7.4.22 [H]
Molecular weight: Translated: 25227; Mature: 25096
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAYKRILLKLSGEALMGDDAFGINHATIVRMVEEIAEVTRMGVQVAVVIGGGNIFRGVA CCHHHEEHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEECCCEEECCC GGSVGMDRATADYMGMLATVMNALALGDTMDKAGLIARVMSAIGIERVVEPYVRPKALQY CCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LEEGKVVIFAAGTGNPFFTTDTAAALRGAEIGAEIVLKATKVDGVYTADPKKDPRATRYT HHCCCEEEEEECCCCCCEECCHHHHHHHHHCCCEEEEEEEECCCEEECCCCCCCCCCEEE NITFDEAMGKNLEVMDATAFALCRDQKLPIKVFSIFKHGALKRVVQGEDEGTLVHV EEEHHHHCCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEC >Mature Secondary Structure PAYKRILLKLSGEALMGDDAFGINHATIVRMVEEIAEVTRMGVQVAVVIGGGNIFRGVA CHHHEEHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEECCCEEECCC GGSVGMDRATADYMGMLATVMNALALGDTMDKAGLIARVMSAIGIERVVEPYVRPKALQY CCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LEEGKVVIFAAGTGNPFFTTDTAAALRGAEIGAEIVLKATKVDGVYTADPKKDPRATRYT HHCCCEEEEEECCCCCCEECCHHHHHHHHHCCCEEEEEEEECCCEEECCCCCCCCCCEEE NITFDEAMGKNLEVMDATAFALCRDQKLPIKVFSIFKHGALKRVVQGEDEGTLVHV EEEHHHHCCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA