| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788530
Identifier: 91788530
GI number: 91788530
Start: 2803144
End: 2804154
Strand: Reverse
Name: 91788530
Synonym: Bpro_2668
Alternate gene names: NA
Gene position: 2804154-2803144 (Counterclockwise)
Preceding gene: 91788531
Following gene: 91788528
Centisome position: 53.92
GC content: 63.3
Gene sequence:
>1011_bases ATGTCCGAAGCCAGGTCCGTTGGTCGTTTCGTGGGTCGTTTGTCACGCCGCCATTTCAACCTGGCCATCACGGCCGGCGC CAGTGCGGTGTGCGCGCCGCTGTTTGCCCAGTCTGCCTGGCCGAACAAGCCGATACGCCTGATCGTGCCTTACACGCCCG GCGGCTTCACCGACCAGATGGCGCGCATCGTCCAGGTCGGTCTGCAAAACCGCCTGCAGCAAACCGTCACGGTGGACAAC AAGCCCGGCGCCAACAGCATCATTGGTGTGGACATGTTGGCCAAGGCCCCGGCCGATGGCAGTACGTTTGCGGTGGTCAT TGCCGCCTATGCCGCCAACACCACGCTGTACCCCAAACTTCCTTACGACCCGCGCAAGGATTTAACTGGCGTCTCGCTGA TGGGCGTGTCGCCGCTGCTGGCCGCCGTCAACAACGACGCACCCTTCAAAACTGCCAAAGAGCTGATTGAGTACGCACGG GCCCATCCCGGCAAGGTCAGTTTTGGCTCATCCGGCAATGGCTCGGCCGCGCACCTGACCACCGAGCTGCTCAAGTCCCT CACCAAAACCTATATGGTGCACATTCCCTACCGCGGCGCCGTGCCGGCGCTCACCGATTTGATGGGCGGGCAGATCCAGT TGTTTTTTGATGCCGCCACCGGACTGATCAACCAGGGCAAGGCCGGCAAGGTCCGGCTGATTGGCGTGTCCAGCGACCGC CGCCTGCCGGCTGTGCCCGAGGTGCCGACCTTCATCGAGCAGGGATTTGCCGGCTTCACCGGCAGCACCTGGGCCGGCAT GCTGGCGCCGGCTGCCACGCCGAAAGACATCATCAGGCGTATGTCGGAAGAAGTGGGGCGCATCATTCGCAGCGATGAAA CCCGGGCCCGGCTGGACGCCATGGGCACTTTTGCCGGCGGGGGCACACCGGAGGAGTTTGATGCGTTTATTGCGGCCGAA ACGGCCAAATGGGCGAAGGTGATCAGGGATGCCGGCGTCAAGGCCGACTGA
Upstream 100 bases:
>100_bases CATCAAACGCTCGGCCTCATGCTATCCGCTCTTGTGGTGCAAACCCGGTGGCCGTCGCAGGCTGCCTGGCCGAGAATGGC TGGTCTTATCTGGAGAAGCC
Downstream 100 bases:
>100_bases TCAATGGACAGGCAGATGCTGCCTGCGCGGACCTATTCGCCAGCCGGGTTGGCTGGCGGCGCGCTGCCTTGCACGCGGCG GGCGCCGTCAAAGCGGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MSEARSVGRFVGRLSRRHFNLAITAGASAVCAPLFAQSAWPNKPIRLIVPYTPGGFTDQMARIVQVGLQNRLQQTVTVDN KPGANSIIGVDMLAKAPADGSTFAVVIAAYAANTTLYPKLPYDPRKDLTGVSLMGVSPLLAAVNNDAPFKTAKELIEYAR AHPGKVSFGSSGNGSAAHLTTELLKSLTKTYMVHIPYRGAVPALTDLMGGQIQLFFDAATGLINQGKAGKVRLIGVSSDR RLPAVPEVPTFIEQGFAGFTGSTWAGMLAPAATPKDIIRRMSEEVGRIIRSDETRARLDAMGTFAGGGTPEEFDAFIAAE TAKWAKVIRDAGVKAD
Sequences:
>Translated_336_residues MSEARSVGRFVGRLSRRHFNLAITAGASAVCAPLFAQSAWPNKPIRLIVPYTPGGFTDQMARIVQVGLQNRLQQTVTVDN KPGANSIIGVDMLAKAPADGSTFAVVIAAYAANTTLYPKLPYDPRKDLTGVSLMGVSPLLAAVNNDAPFKTAKELIEYAR AHPGKVSFGSSGNGSAAHLTTELLKSLTKTYMVHIPYRGAVPALTDLMGGQIQLFFDAATGLINQGKAGKVRLIGVSSDR RLPAVPEVPTFIEQGFAGFTGSTWAGMLAPAATPKDIIRRMSEEVGRIIRSDETRARLDAMGTFAGGGTPEEFDAFIAAE TAKWAKVIRDAGVKAD >Mature_335_residues SEARSVGRFVGRLSRRHFNLAITAGASAVCAPLFAQSAWPNKPIRLIVPYTPGGFTDQMARIVQVGLQNRLQQTVTVDNK PGANSIIGVDMLAKAPADGSTFAVVIAAYAANTTLYPKLPYDPRKDLTGVSLMGVSPLLAAVNNDAPFKTAKELIEYARA HPGKVSFGSSGNGSAAHLTTELLKSLTKTYMVHIPYRGAVPALTDLMGGQIQLFFDAATGLINQGKAGKVRLIGVSSDRR LPAVPEVPTFIEQGFAGFTGSTWAGMLAPAATPKDIIRRMSEEVGRIIRSDETRARLDAMGTFAGGGTPEEFDAFIAAET AKWAKVIRDAGVKAD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 35661; Mature: 35530
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEARSVGRFVGRLSRRHFNLAITAGASAVCAPLFAQSAWPNKPIRLIVPYTPGGFTDQM CCHHHHHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHH ARIVQVGLQNRLQQTVTVDNKPGANSIIGVDMLAKAPADGSTFAVVIAAYAANTTLYPKL HHHHHHHHHHHHHHHEEECCCCCCCCEEEHHHHHCCCCCCCHHEEEEEHHHCCCEECCCC PYDPRKDLTGVSLMGVSPLLAAVNNDAPFKTAKELIEYARAHPGKVSFGSSGNGSAAHLT CCCCCCCCCCEEHHCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHH TELLKSLTKTYMVHIPYRGAVPALTDLMGGQIQLFFDAATGLINQGKAGKVRLIGVSSDR HHHHHHHHHHEEEECCCCCCHHHHHHHCCCEEEEEEEHHHHHHCCCCCCEEEEEEECCCC RLPAVPEVPTFIEQGFAGFTGSTWAGMLAPAATPKDIIRRMSEEVGRIIRSDETRARLDA CCCCCCCCHHHHHHCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH MGTFAGGGTPEEFDAFIAAETAKWAKVIRDAGVKAD HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SEARSVGRFVGRLSRRHFNLAITAGASAVCAPLFAQSAWPNKPIRLIVPYTPGGFTDQM CHHHHHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHH ARIVQVGLQNRLQQTVTVDNKPGANSIIGVDMLAKAPADGSTFAVVIAAYAANTTLYPKL HHHHHHHHHHHHHHHEEECCCCCCCCEEEHHHHHCCCCCCCHHEEEEEHHHCCCEECCCC PYDPRKDLTGVSLMGVSPLLAAVNNDAPFKTAKELIEYARAHPGKVSFGSSGNGSAAHLT CCCCCCCCCCEEHHCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHH TELLKSLTKTYMVHIPYRGAVPALTDLMGGQIQLFFDAATGLINQGKAGKVRLIGVSSDR HHHHHHHHHHEEEECCCCCCHHHHHHHCCCEEEEEEEHHHHHHCCCCCCEEEEEEECCCC RLPAVPEVPTFIEQGFAGFTGSTWAGMLAPAATPKDIIRRMSEEVGRIIRSDETRARLDA CCCCCCCCHHHHHHCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH MGTFAGGGTPEEFDAFIAAETAKWAKVIRDAGVKAD HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]