| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is prpC [H]
Identifier: 91788481
GI number: 91788481
Start: 2750080
End: 2750841
Strand: Direct
Name: prpC [H]
Synonym: Bpro_2619
Alternate gene names: 91788481
Gene position: 2750080-2750841 (Clockwise)
Preceding gene: 91788478
Following gene: 91788498
Centisome position: 52.88
GC content: 56.04
Gene sequence:
>762_bases ATGTCCAAAGGTTATCGAATCACAGCGTCCACCGGAATCCATAAGGGCGACCGGGACTATCAACAAGACCAGGTCAACCT GTATACCCACATTCGTATTCCGGGTTGCATGCTGGGCATAGTGGCTGACGGCATGGGCGGACGAAGCGGCGGGCGCAAAG CCTCCGACCAGGTCATGCTCACCGCCAAACAGCTTTTTGAGCGCTATGCACCGGATATTGATGATGCGCCCTCCATGCTC AAGCAGATCATTGAAGAGGCTCATCTTGTCATCAAGCTGACAGCGCTTTCTGCTGAACAGGAGCCGCACAGCACGCTGGC AGCCTTTGTCATCAATCCTGGCGGAGACTGCCACTGGGCGCACACCGGTGACTCACGGATTTACCACTACCACGGCAACA AGCTGATCCACAGAACGGTGGACCATTCCTACGTACAGACGCTGGTCGACAAGGGTGAGATTACCGAAGAGGAGGCCAAT GTCCATCCGCAATCCAACATCTTGATGGGTTGCCTGGGAACAGAAGAATCACCCCCCATCACCCTGCACTTCATCCCGCA ATTGCGTCCGGATGATGTGTTGCTTGCATGCAGCGATGGGGTATGGCACTACTTCAGCACCAGTGAAATCGGATCGGCTT TGTCCATGCTGTCGCCGCGCGAAGCAACCGAGTTCCTGATCCAGAAAGCCAGATCGCGTGCACGGGGTGGCGGCGACAAC CTGTCGCTGGTGATCGTCAAGCTCGAACCTTTGGGCCAGTAA
Upstream 100 bases:
>100_bases AAATTTAAGTCCAAGGTTTTTTGTCCGTACGCGCTGCTTCATCTGATAATACGTCGATTGAGGCCATAAATCGAGTCTTG CCGACTTGAACTATCAAACG
Downstream 100 bases:
>100_bases GGCCAGGAGTCTGCGCCAGCCGAGGCAGCCTGGGTTCGCAAGACCTGGGCAGTGTGTATGCCCTTGCATGGGTTGCCAAA TAGCAAAGCGGCCACTGGCG
Product: protein serine/threonine phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MSKGYRITASTGIHKGDRDYQQDQVNLYTHIRIPGCMLGIVADGMGGRSGGRKASDQVMLTAKQLFERYAPDIDDAPSML KQIIEEAHLVIKLTALSAEQEPHSTLAAFVINPGGDCHWAHTGDSRIYHYHGNKLIHRTVDHSYVQTLVDKGEITEEEAN VHPQSNILMGCLGTEESPPITLHFIPQLRPDDVLLACSDGVWHYFSTSEIGSALSMLSPREATEFLIQKARSRARGGGDN LSLVIVKLEPLGQ
Sequences:
>Translated_253_residues MSKGYRITASTGIHKGDRDYQQDQVNLYTHIRIPGCMLGIVADGMGGRSGGRKASDQVMLTAKQLFERYAPDIDDAPSML KQIIEEAHLVIKLTALSAEQEPHSTLAAFVINPGGDCHWAHTGDSRIYHYHGNKLIHRTVDHSYVQTLVDKGEITEEEAN VHPQSNILMGCLGTEESPPITLHFIPQLRPDDVLLACSDGVWHYFSTSEIGSALSMLSPREATEFLIQKARSRARGGGDN LSLVIVKLEPLGQ >Mature_252_residues SKGYRITASTGIHKGDRDYQQDQVNLYTHIRIPGCMLGIVADGMGGRSGGRKASDQVMLTAKQLFERYAPDIDDAPSMLK QIIEEAHLVIKLTALSAEQEPHSTLAAFVINPGGDCHWAHTGDSRIYHYHGNKLIHRTVDHSYVQTLVDKGEITEEEANV HPQSNILMGCLGTEESPPITLHFIPQLRPDDVLLACSDGVWHYFSTSEIGSALSMLSPREATEFLIQKARSRARGGGDNL SLVIVKLEPLGQ
Specific function: Protein phosphatase that dephosphorylates prkC and fusA (elongation factor G). PrpC and prkC are cotranscribed, which suggests that they form a functional couple in vivo, prpC's primary role being possibly to counter the action of prkC. May be involved in
COG id: COG0631
COG function: function code T; Serine/threonine protein phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PP2C-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015655 - InterPro: IPR001932 - InterPro: IPR014045 [H]
Pfam domain/function: PF00481 PP2C [H]
EC number: =3.1.3.16 [H]
Molecular weight: Translated: 27840; Mature: 27709
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKGYRITASTGIHKGDRDYQQDQVNLYTHIRIPGCMLGIVADGMGGRSGGRKASDQVML CCCCEEEEEECCCCCCCCCCCCCCEEEEEEEECCHHEEEEEECCCCCCCCCCCCCCHHHH TAKQLFERYAPDIDDAPSMLKQIIEEAHLVIKLTALSAEQEPHSTLAAFVINPGGDCHWA HHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEEEEEECCCCCCCCEEEEEEECCCCCEEEE HTGDSRIYHYHGNKLIHRTVDHSYVQTLVDKGEITEEEANVHPQSNILMGCLGTEESPPI ECCCCEEEEEECCEEEEHHHHHHHHHHHHHCCCCCHHHCCCCCCCCEEEEEECCCCCCCE TLHFIPQLRPDDVLLACSDGVWHYFSTSEIGSALSMLSPREATEFLIQKARSRARGGGDN EEEECCCCCCCCEEEEECCCEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC LSLVIVKLEPLGQ EEEEEEEECCCCC >Mature Secondary Structure SKGYRITASTGIHKGDRDYQQDQVNLYTHIRIPGCMLGIVADGMGGRSGGRKASDQVML CCCEEEEEECCCCCCCCCCCCCCEEEEEEEECCHHEEEEEECCCCCCCCCCCCCCHHHH TAKQLFERYAPDIDDAPSMLKQIIEEAHLVIKLTALSAEQEPHSTLAAFVINPGGDCHWA HHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEEEEEECCCCCCCCEEEEEEECCCCCEEEE HTGDSRIYHYHGNKLIHRTVDHSYVQTLVDKGEITEEEANVHPQSNILMGCLGTEESPPI ECCCCEEEEEECCEEEEHHHHHHHHHHHHHCCCCCHHHCCCCCCCCEEEEEECCCCCCCE TLHFIPQLRPDDVLLACSDGVWHYFSTSEIGSALSMLSPREATEFLIQKARSRARGGGDN EEEECCCCCCCCEEEEECCCEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC LSLVIVKLEPLGQ EEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9534248; 9384377 [H]