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The map label for this gene is yoaA [C]

Identifier: 91788479

GI number: 91788479

Start: 2747784

End: 2749790

Strand: Reverse

Name: yoaA [C]

Synonym: Bpro_2617

Alternate gene names: 91788479

Gene position: 2749790-2747784 (Counterclockwise)

Preceding gene: 91788480

Following gene: 91788477

Centisome position: 52.88

GC content: 63.73

Gene sequence:

>2007_bases
ATGAATCTCCTGTTTGAAGTGGAAGAGGCATTCGCTACGGATGGCGTTTTGTCGCGCGCTGCCGAGCATTTTGTGCCGCG
CAGTGGCCAGACCGAGATGGCGCTGGCAGTGGCGCGCGCGATCGAAGGTGCTTACCCGCTCGTCGTGGAGGCCAGCACCG
GTGTGGGTAAGACTTTTTCCTATCTAGTTCCGGCTTTGCTGAGCGGTGAACGGGTGCTGTTGTCCACCGCGACCAAGGCC
TTGCAGGATCAGCTGTTTGGCCGCGATTTGCCCCGGCTGGTCGAGGCGCTGGGTTTGCCGGTGCGCACGGCGCTACTCAA
GGGGCGGGGCAGCTATTTGTGCCTGCATCGCATGGAGATGGCCCGCCAAGATGCTCATCTGCCCGACGGTGTTTCAACGC
GCACGCTGGCAAAAATTGAAGAATGGTCGCAGGCGACGCGAACGGGTGATCTAGCGGAACTGCCTGGCCTGGATGAGCGT
TCGCCGGTGATTCCGCTGGTCACGTCGACGCGGGAGAATTGCCTGGGCGCGCAGTGTCCGCGCTTTCGAGCCTGCCATGT
GAACCTTGCCCGCAGGGAGGCCATGGCGGCTGACGTGGTCGTCATCAACCACCATTTGTTTTTCGCCGACCTGGCGGTTC
GCGAATCTGGCGTGGCAGAACTGCTGCCTTCCGTGCGTATCGCGATCTTTGATGAAGCGCATCAGCTGAACGAGACGGGC
GTGCAGTTTCTGGGGCGAAACCTCACGACTGGCCAATTGCTGGATTTTGCCCGCGACATGCTGGCGGCCGGGCTGCAATT
GGCTCGCGGCCTCGTGGATTGGCAGCAGGTTGTGGGCGCCACCGAGCAGGCGGCCCGCGAGTTGCGCCTGTGCGCCGGCA
AGCAATACCCCGGCACCAAGCTGCGCTGGACCGGCGAGACGCCCGACGGCCTGAGCGCTTCCGGCTGGAGCGAGGCCGTC
GCGGCGGTGCATGCCGCCTGTGTGCAGGCCTGCGCCGCGCTGGATACGGTCAGCGAGATTGCCCCCGACTTTGTCCGTCT
GCATGAGCGTGCGGCAGAACTGGCCGCGCGTGCTGAAGGTTTTGTCCAGGCCTGCGAGCCTGGCTGTGTCCGGTGGGTTG
ATGTGGGTACACAGCTGCGGCTGGTCGAGTCACCGCTGGATATCTCGAAGGCCATGAAAAGCAAGGTGCTCGGGGCCGGC
GAGGAGGGCGTGAAATCCTGGGTATTTACCTCGGCCACATTGGGGGACGACGACAAGCTGAGCTGGTTCACCCAGCCTTG
CGGACTGGCTGACGCCCAGGTGCTGAAGGTCGGCAGTCCCTTTGACTATGAGCGGCAGGCAGCGCTGTATGTGCCGCAAG
ACTTCCCCAAGCCGGGAGATCCGTCCCATACGGCCAAGGTGGCAGCATCTGCCGCGGCGTGGGCGCAGCAACTGGGCGGG
CGCACCATGGTGCTGACCACCACGTTGCGGGCATTGCGGATGATCGGCGAGGCGCTTCAACTTGCCTTTGAGGAGTCGGG
TGACCTGGAAGTGCTTGTTCAGGGGGCGATGCCGAAGCGGATCTTGATAGAGCGCTTTCGGGAGGGCAACACCCAGGGCG
GCCGGGGCTGTGTACTGGTGGCGTCGGCGTCGTTCTGGGAGGGCATTGACGTCCCTGGTGATGCGCTTCAGCTGGTGATT
ATCGACAAACTGCCTTTTCCTCCGCCGAACGATCCGCTGGCAGAGGCCCGGGCCAAGCTGCTCGAGTCCCAGGGGCGCAG
TGCCTTCAACGACTACTTTCTGCCGGAGGCCGCCGTGGCACTCAAGCAGGGCGCGGGACGCCTGATACGGCGGGAAACCG
ACCAGGGCATCCTGGTGGTATGCGACGGCCGGCTGGCCTCCATGGGCTATGGGCGGCGTTTGCTGAGAGCGCTCCCGCCG
ATGCAGCGCCTGGCATCGGAGCAGGAGTTAATGGAAAGGCTGGAGGCCCTTACCAGAACTTGTACCATGGGTTGTCTACC
GACTTGA

Upstream 100 bases:

>100_bases
TTGACGAACTCCTGCTCAGGCGCCTGAAAAAGCGCCGCCTGCTGCTGCGCGACCAGATTTCGCAGCTCGAATCCTCGCTG
GATCCTCCCGAGCCCGCCTG

Downstream 100 bases:

>100_bases
AGCCCTTGCTCATGTATTGGCTCTGTGGGTAGGATTTTTCCATGATGCGGCGCATGTCATCGCGCAACTCCACCATGCCC
AGTGCGTCGTAGGATTTGTA

Product: helicase c2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 668; Mature: 668

Protein sequence:

>668_residues
MNLLFEVEEAFATDGVLSRAAEHFVPRSGQTEMALAVARAIEGAYPLVVEASTGVGKTFSYLVPALLSGERVLLSTATKA
LQDQLFGRDLPRLVEALGLPVRTALLKGRGSYLCLHRMEMARQDAHLPDGVSTRTLAKIEEWSQATRTGDLAELPGLDER
SPVIPLVTSTRENCLGAQCPRFRACHVNLARREAMAADVVVINHHLFFADLAVRESGVAELLPSVRIAIFDEAHQLNETG
VQFLGRNLTTGQLLDFARDMLAAGLQLARGLVDWQQVVGATEQAARELRLCAGKQYPGTKLRWTGETPDGLSASGWSEAV
AAVHAACVQACAALDTVSEIAPDFVRLHERAAELAARAEGFVQACEPGCVRWVDVGTQLRLVESPLDISKAMKSKVLGAG
EEGVKSWVFTSATLGDDDKLSWFTQPCGLADAQVLKVGSPFDYERQAALYVPQDFPKPGDPSHTAKVAASAAAWAQQLGG
RTMVLTTTLRALRMIGEALQLAFEESGDLEVLVQGAMPKRILIERFREGNTQGGRGCVLVASASFWEGIDVPGDALQLVI
IDKLPFPPPNDPLAEARAKLLESQGRSAFNDYFLPEAAVALKQGAGRLIRRETDQGILVVCDGRLASMGYGRRLLRALPP
MQRLASEQELMERLEALTRTCTMGCLPT

Sequences:

>Translated_668_residues
MNLLFEVEEAFATDGVLSRAAEHFVPRSGQTEMALAVARAIEGAYPLVVEASTGVGKTFSYLVPALLSGERVLLSTATKA
LQDQLFGRDLPRLVEALGLPVRTALLKGRGSYLCLHRMEMARQDAHLPDGVSTRTLAKIEEWSQATRTGDLAELPGLDER
SPVIPLVTSTRENCLGAQCPRFRACHVNLARREAMAADVVVINHHLFFADLAVRESGVAELLPSVRIAIFDEAHQLNETG
VQFLGRNLTTGQLLDFARDMLAAGLQLARGLVDWQQVVGATEQAARELRLCAGKQYPGTKLRWTGETPDGLSASGWSEAV
AAVHAACVQACAALDTVSEIAPDFVRLHERAAELAARAEGFVQACEPGCVRWVDVGTQLRLVESPLDISKAMKSKVLGAG
EEGVKSWVFTSATLGDDDKLSWFTQPCGLADAQVLKVGSPFDYERQAALYVPQDFPKPGDPSHTAKVAASAAAWAQQLGG
RTMVLTTTLRALRMIGEALQLAFEESGDLEVLVQGAMPKRILIERFREGNTQGGRGCVLVASASFWEGIDVPGDALQLVI
IDKLPFPPPNDPLAEARAKLLESQGRSAFNDYFLPEAAVALKQGAGRLIRRETDQGILVVCDGRLASMGYGRRLLRALPP
MQRLASEQELMERLEALTRTCTMGCLPT
>Mature_668_residues
MNLLFEVEEAFATDGVLSRAAEHFVPRSGQTEMALAVARAIEGAYPLVVEASTGVGKTFSYLVPALLSGERVLLSTATKA
LQDQLFGRDLPRLVEALGLPVRTALLKGRGSYLCLHRMEMARQDAHLPDGVSTRTLAKIEEWSQATRTGDLAELPGLDER
SPVIPLVTSTRENCLGAQCPRFRACHVNLARREAMAADVVVINHHLFFADLAVRESGVAELLPSVRIAIFDEAHQLNETG
VQFLGRNLTTGQLLDFARDMLAAGLQLARGLVDWQQVVGATEQAARELRLCAGKQYPGTKLRWTGETPDGLSASGWSEAV
AAVHAACVQACAALDTVSEIAPDFVRLHERAAELAARAEGFVQACEPGCVRWVDVGTQLRLVESPLDISKAMKSKVLGAG
EEGVKSWVFTSATLGDDDKLSWFTQPCGLADAQVLKVGSPFDYERQAALYVPQDFPKPGDPSHTAKVAASAAAWAQQLGG
RTMVLTTTLRALRMIGEALQLAFEESGDLEVLVQGAMPKRILIERFREGNTQGGRGCVLVASASFWEGIDVPGDALQLVI
IDKLPFPPPNDPLAEARAKLLESQGRSAFNDYFLPEAAVALKQGAGRLIRRETDQGILVVCDGRLASMGYGRRLLRALPP
MQRLASEQELMERLEALTRTCTMGCLPT

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=651, Percent_Identity=40.0921658986175, Blast_Score=423, Evalue=1e-119,
Organism=Escherichia coli, GI1787018, Length=237, Percent_Identity=33.7552742616034, Blast_Score=110, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR001650
- InterPro:   IPR006935 [H]

Pfam domain/function: PF04851 ResIII [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 72241; Mature: 72241

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLLFEVEEAFATDGVLSRAAEHFVPRSGQTEMALAVARAIEGAYPLVVEASTGVGKTFS
CCCEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHH
YLVPALLSGERVLLSTATKALQDQLFGRDLPRLVEALGLPVRTALLKGRGSYLCLHRMEM
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHCCCCEEHHHHHHH
ARQDAHLPDGVSTRTLAKIEEWSQATRTGDLAELPGLDERSPVIPLVTSTRENCLGAQCP
HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCEEEEECCCHHHHCCCCCC
RFRACHVNLARREAMAADVVVINHHLFFADLAVRESGVAELLPSVRIAIFDEAHQLNETG
CCCHHHHHHHHHHHHHHCEEEEECHHHHHHHHHHHCCHHHHHHHHEEEEEHHHHHHHHHH
VQFLGRNLTTGQLLDFARDMLAAGLQLARGLVDWQQVVGATEQAARELRLCAGKQYPGTK
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCE
LRWTGETPDGLSASGWSEAVAAVHAACVQACAALDTVSEIAPDFVRLHERAAELAARAEG
EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVQACEPGCVRWVDVGTQLRLVESPLDISKAMKSKVLGAGEEGVKSWVFTSATLGDDDKL
HHHHCCCCCEEEEECCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHEEECCCCCCCCC
SWFTQPCGLADAQVLKVGSPFDYERQAALYVPQDFPKPGDPSHTAKVAASAAAWAQQLGG
HHHCCCCCCCCCHHEECCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
RTMVLTTTLRALRMIGEALQLAFEESGDLEVLVQGAMPKRILIERFREGNTQGGRGCVLV
CEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCEEEEE
ASASFWEGIDVPGDALQLVIIDKLPFPPPNDPLAEARAKLLESQGRSAFNDYFLPEAAVA
EECCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCHHHHHH
LKQGAGRLIRRETDQGILVVCDGRLASMGYGRRLLRALPPMQRLASEQELMERLEALTRT
HHHCCCHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
CTMGCLPT
HHCCCCCC
>Mature Secondary Structure
MNLLFEVEEAFATDGVLSRAAEHFVPRSGQTEMALAVARAIEGAYPLVVEASTGVGKTFS
CCCEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHH
YLVPALLSGERVLLSTATKALQDQLFGRDLPRLVEALGLPVRTALLKGRGSYLCLHRMEM
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHCCCCEEHHHHHHH
ARQDAHLPDGVSTRTLAKIEEWSQATRTGDLAELPGLDERSPVIPLVTSTRENCLGAQCP
HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCEEEEECCCHHHHCCCCCC
RFRACHVNLARREAMAADVVVINHHLFFADLAVRESGVAELLPSVRIAIFDEAHQLNETG
CCCHHHHHHHHHHHHHHCEEEEECHHHHHHHHHHHCCHHHHHHHHEEEEEHHHHHHHHHH
VQFLGRNLTTGQLLDFARDMLAAGLQLARGLVDWQQVVGATEQAARELRLCAGKQYPGTK
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCE
LRWTGETPDGLSASGWSEAVAAVHAACVQACAALDTVSEIAPDFVRLHERAAELAARAEG
EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVQACEPGCVRWVDVGTQLRLVESPLDISKAMKSKVLGAGEEGVKSWVFTSATLGDDDKL
HHHHCCCCCEEEEECCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHEEECCCCCCCCC
SWFTQPCGLADAQVLKVGSPFDYERQAALYVPQDFPKPGDPSHTAKVAASAAAWAQQLGG
HHHCCCCCCCCCHHEECCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
RTMVLTTTLRALRMIGEALQLAFEESGDLEVLVQGAMPKRILIERFREGNTQGGRGCVLV
CEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCEEEEE
ASASFWEGIDVPGDALQLVIIDKLPFPPPNDPLAEARAKLLESQGRSAFNDYFLPEAAVA
EECCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCHHHHHH
LKQGAGRLIRRETDQGILVVCDGRLASMGYGRRLLRALPPMQRLASEQELMERLEALTRT
HHHCCCHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
CTMGCLPT
HHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]