| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788414
Identifier: 91788414
GI number: 91788414
Start: 2673632
End: 2674123
Strand: Direct
Name: 91788414
Synonym: Bpro_2552
Alternate gene names: NA
Gene position: 2673632-2674123 (Clockwise)
Preceding gene: 91788413
Following gene: 91788415
Centisome position: 51.41
GC content: 57.32
Gene sequence:
>492_bases ATGAATAAGTCATCCGCTTTGCTAGTAAGACACGTACCGAGCCAGTGTGGCGGTGCGGCGGTGGAATTCGCCCTGATCCT TGCCTTGCTCATCAGCTTACTGGCCGGAATTTTCGAATTTGGCCGCGCTTTCTGGTACTACGATGCGCTGACCAAGGCCA CGCGGGATGGGGCACGCCTGATGTCGGTCACGGACAAGGCAACCCTCAACACAGCAGATACTGGCGGTATAGCATTAACA AAAACGCTAGTGGTCAACGCCGTGACAAGCGCGGGCGTGCCCGATTTCGCGAATGGAAACGTTGAGGTCACTTGCCTCGA TGCGACTTTCGCCGACGCCACATGCACCGATGGCACCGCCCCGGGTGGGGTGCGGGTTCGGATCGTGGGTTACTCCATGA CCATCGGTCAGTTCATTCCTTTTCTGCTCGGCGGAAGTTCTTCGTACACGGCAAACCTCTCGCCGCACACCACCATGCGC TACATGCAATGA
Upstream 100 bases:
>100_bases ACTTCAGCGGTGGTCCAACCAGACAATTGAGCGTGGAATTTGCCGGACTGGTCAGTCCGGTTCCAACATCCGTGATCATG CTCTATAAGTGACTAAGGAG
Downstream 100 bases:
>100_bases GGAGATGAAAATGCGAACCTCACCTCCACCGAAACACCCATCAGCGCATCGATCACCTTTCAAGCGACAAGGAGGTGTTG CCGCTGTTGAATTTGCCATC
Product: TadE-like protein
Products: NA
Alternate protein names: TadE-Like
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MNKSSALLVRHVPSQCGGAAVEFALILALLISLLAGIFEFGRAFWYYDALTKATRDGARLMSVTDKATLNTADTGGIALT KTLVVNAVTSAGVPDFANGNVEVTCLDATFADATCTDGTAPGGVRVRIVGYSMTIGQFIPFLLGGSSSYTANLSPHTTMR YMQ
Sequences:
>Translated_163_residues MNKSSALLVRHVPSQCGGAAVEFALILALLISLLAGIFEFGRAFWYYDALTKATRDGARLMSVTDKATLNTADTGGIALT KTLVVNAVTSAGVPDFANGNVEVTCLDATFADATCTDGTAPGGVRVRIVGYSMTIGQFIPFLLGGSSSYTANLSPHTTMR YMQ >Mature_163_residues MNKSSALLVRHVPSQCGGAAVEFALILALLISLLAGIFEFGRAFWYYDALTKATRDGARLMSVTDKATLNTADTGGIALT KTLVVNAVTSAGVPDFANGNVEVTCLDATFADATCTDGTAPGGVRVRIVGYSMTIGQFIPFLLGGSSSYTANLSPHTTMR YMQ
Specific function: Unknown
COG id: COG4961
COG function: function code U; Flp pilus assembly protein TadG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17094; Mature: 17094
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKSSALLVRHVPSQCGGAAVEFALILALLISLLAGIFEFGRAFWYYDALTKATRDGARL CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHE MSVTDKATLNTADTGGIALTKTLVVNAVTSAGVPDFANGNVEVTCLDATFADATCTDGTA EEECCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCC PGGVRVRIVGYSMTIGQFIPFLLGGSSSYTANLSPHTTMRYMQ CCCEEEEEEEEECCHHHHHHHHCCCCCCEEECCCCCCEEEECC >Mature Secondary Structure MNKSSALLVRHVPSQCGGAAVEFALILALLISLLAGIFEFGRAFWYYDALTKATRDGARL CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHE MSVTDKATLNTADTGGIALTKTLVVNAVTSAGVPDFANGNVEVTCLDATFADATCTDGTA EEECCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCC PGGVRVRIVGYSMTIGQFIPFLLGGSSSYTANLSPHTTMRYMQ CCCEEEEEEEEECCHHHHHHHHCCCCCCEEECCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA