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The map label for this gene is yhgF [H]

Identifier: 91788399

GI number: 91788399

Start: 2655912

End: 2658323

Strand: Reverse

Name: yhgF [H]

Synonym: Bpro_2537

Alternate gene names: 91788399

Gene position: 2658323-2655912 (Counterclockwise)

Preceding gene: 91788401

Following gene: 91788398

Centisome position: 51.12

GC content: 62.56

Gene sequence:

>2412_bases
ATGCAAAAAATCATCCGCCAGATCGCTACAGAAATCAAAGTCCAGGAGCACCAGGTCAAGGCAGCTGTGGAACTGCTGGA
CGGCGGCGCCACCGTACCCTTTGTGGCGCGTTACCGCAAGGAAGCCACTGGCGGGCTCGACGATATCCAGCTGCGCGAAC
TGGAATACCGGCTGGGCTACCTGCGCGAACTCGAAGAGCGCCGTGAAGCGGTCCTCAAAAGCATTGAAGAGCAGGGCAAA
CTCACCCCTGAACTGCGCGCGGCCATTGAGCTGGCGGCCACCAAGCAGGATCTGGAAGACCTGTACCTGCCCTACAAACC
CAAACGCCGCACCAAGGGGCAAATTGCGCGCGAAGCGGGTATTGAGCCCCTGGCCGACAAGCTGTTTGCAGATCCCTCGC
TGAATCCGGCGGAAGAGGCCGTGGCCTTTGTGAAGACTGAGAAGAACGAAAGCGACACTCACAACGTTAGCGATTTCACC
ACGGTGCAGGCTGTGCTTGACGGCGTGCGCGATATCTTGAGCGAGCGCTGGGCCGAGGACGCTGCGCTGGTGCAGTCACT
GCGCAACTGGCTGTGGAATGAGGGCCTGTTTTCATCCAAGATGGTGACGGGCAAGGACGAGAACCACCCCGACAACGCGA
AGTTCCGCGACTACTTTGACTACGACGAACCCATCGGCCGCGTGCCGTCGCACCGCGCTCTGGCTGTGTTTCGCGGCCGC
GGGCTGGAGATTCTGGATGCCAAGCTAGTGCTGCCGGAGCCACCCGAGTCCGGCAAACCCACGGGAGCGAAGGCGACCCC
TACGGTGTCTTTGGCCGAAGGCAAGATTGCGCTGCACCTGGGCTGGAGCCACAAGATGCGCGCGGCTGACGACCTGATCC
GCAAATGCGTGGCCTGGACCTGGCGCGTCAAGCTCAGCCTCTCGCTGGAACGCGACCTGTTTACCCGCCTGCGCGAAGAA
GCCGAAAAGGTCGCCATCAAGGTGTTTGCCGACAACCTGCGTGACCTGTTGCTGGCGGCCCCTGCTGGCCCGCGCGTGGT
GATGGGCCTGGATCCGGGCATTCGCACTGGCGTGAAGGTGGCGGTGGTCGATGCGACCGGCAAGCTGGTGGAAACCGCCA
CGGTCTACCCGCACGAGCCGCGCAAGGACTGGGACGGCTCACTCCATGCCCTGGCCAAGCTCTGCGAAAAACACGGCGTG
AACCTGATCGCCATTGGCAACGGTACGGCCAGCCGGGAGACCGACAAGCTGGCGGCCGACCTGATCAAGCTGATGGCCAA
GGTCGAGCAGGCAATTGAAAAGGTTGTGGTCAGTGAAGCCGGCGCCTCGGTCTATTCCGCCAGCGAATTTGCCTCGCAGG
AGATGCCTGACGTGGACGTGAGCCTGCGCGGCGCGGCGAGCATTGCGCGCCGCCTGCAGGACCCGCTGGCCGAACTTGTC
AAGATTGACCCGAAATCGATTGGCGTCGGCCAGTACCAGCATGACGTGAACCAGAGCGATCTGGCGCGCAGCCTGGACAC
GGTGGTCGAAGACTGCGTGAACAGCGTGGGCGTGGACCTGAACACGGCCAGCGTGCCGCTGCTGGCGCGCGTCTCTGGCC
TGAGCCAGACCGTGGCGAAGTCCGTGGTGCGCTGGCGCGATGCCAATGGCGCGTTCGCCAGCCGTGCCGACTTGCTGAAA
GTGACAGGGCTGGGCGCCAAGACTTTTGAGCAGAGCGCCGGGTTTTTGCGCCTGCGTACCCAGGGTCCAGGCAGCAACCC
GCTCGACATGACAGGCGTGCACCCTGAAACCTACCCCGTGGTTGAAAAAATCATGGCGCACACCGGCAAGCCGGTGGCTG
AGCTCATGGGCCGCGCCGAAATGCTCAAGACGCTCAAACCCGAGCTGTTTGCCAACGAAAAATTTGGCGTGATTACCGTC
AGGGACATCATTGCCGAGCTGGAAAAACCGGGCCGCGACCCACGCCCCGACTTCAAGGTTGCGCGCTTCAATGAGGGCGT
GGAAGACATCAGGGATTTAAAGGAGGGCATGACGCTGGAGGGCACGGTCAGCAATGTGGCTGCGTTTGGCGCCTTTGTGG
ACATTGGCGTGCACCAAGACGGCCTGGTCCATGTGAGCCAGCTGGCCAACAAGTTTGTAAACGATGCGCGTGAGGTGGTG
AAAACCGGCGACATCGTCAAGGTGCGCGTGACCGAGGTGGACGTGGCGCGCAAGCGCATTGGCCTGACCATGAAGCTGGG
CGACGCACCCCCAAGGCGTGATGGTCCACGGGATAACCGTTTTGAGAGCGCACGGCCAGGGTCGCAGAGCCGTGGAGGCG
GCAGCTACGGCGCGCGACCTAATGCACCTCAGCCCTCGGCGGCAACCGCGATGGAGTCTGCGTTCAGCAAGCTGGCGGCG
CTCAAGAAGTAG

Upstream 100 bases:

>100_bases
GACCCTCAGCGTCAGTTTGCGGACGCTGGCCCGCCCTGTGGCGGGGTGGCCCCATGCCAGCCCGCATTCATGGCTCCAGC
CCCCAATTCTCTTTCTCAAC

Downstream 100 bases:

>100_bases
GCAAGAATCGACCGGCAAGGATGGGAACTTGGGAACTACCCCCATTCAGCCGACTTCAGGTTCAATCTGCAGTCGAATCA
CTGAAAAGTTGCACTGAATC

Product: RNA-binding S1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 803; Mature: 803

Protein sequence:

>803_residues
MQKIIRQIATEIKVQEHQVKAAVELLDGGATVPFVARYRKEATGGLDDIQLRELEYRLGYLRELEERREAVLKSIEEQGK
LTPELRAAIELAATKQDLEDLYLPYKPKRRTKGQIAREAGIEPLADKLFADPSLNPAEEAVAFVKTEKNESDTHNVSDFT
TVQAVLDGVRDILSERWAEDAALVQSLRNWLWNEGLFSSKMVTGKDENHPDNAKFRDYFDYDEPIGRVPSHRALAVFRGR
GLEILDAKLVLPEPPESGKPTGAKATPTVSLAEGKIALHLGWSHKMRAADDLIRKCVAWTWRVKLSLSLERDLFTRLREE
AEKVAIKVFADNLRDLLLAAPAGPRVVMGLDPGIRTGVKVAVVDATGKLVETATVYPHEPRKDWDGSLHALAKLCEKHGV
NLIAIGNGTASRETDKLAADLIKLMAKVEQAIEKVVVSEAGASVYSASEFASQEMPDVDVSLRGAASIARRLQDPLAELV
KIDPKSIGVGQYQHDVNQSDLARSLDTVVEDCVNSVGVDLNTASVPLLARVSGLSQTVAKSVVRWRDANGAFASRADLLK
VTGLGAKTFEQSAGFLRLRTQGPGSNPLDMTGVHPETYPVVEKIMAHTGKPVAELMGRAEMLKTLKPELFANEKFGVITV
RDIIAELEKPGRDPRPDFKVARFNEGVEDIRDLKEGMTLEGTVSNVAAFGAFVDIGVHQDGLVHVSQLANKFVNDAREVV
KTGDIVKVRVTEVDVARKRIGLTMKLGDAPPRRDGPRDNRFESARPGSQSRGGGSYGARPNAPQPSAATAMESAFSKLAA
LKK

Sequences:

>Translated_803_residues
MQKIIRQIATEIKVQEHQVKAAVELLDGGATVPFVARYRKEATGGLDDIQLRELEYRLGYLRELEERREAVLKSIEEQGK
LTPELRAAIELAATKQDLEDLYLPYKPKRRTKGQIAREAGIEPLADKLFADPSLNPAEEAVAFVKTEKNESDTHNVSDFT
TVQAVLDGVRDILSERWAEDAALVQSLRNWLWNEGLFSSKMVTGKDENHPDNAKFRDYFDYDEPIGRVPSHRALAVFRGR
GLEILDAKLVLPEPPESGKPTGAKATPTVSLAEGKIALHLGWSHKMRAADDLIRKCVAWTWRVKLSLSLERDLFTRLREE
AEKVAIKVFADNLRDLLLAAPAGPRVVMGLDPGIRTGVKVAVVDATGKLVETATVYPHEPRKDWDGSLHALAKLCEKHGV
NLIAIGNGTASRETDKLAADLIKLMAKVEQAIEKVVVSEAGASVYSASEFASQEMPDVDVSLRGAASIARRLQDPLAELV
KIDPKSIGVGQYQHDVNQSDLARSLDTVVEDCVNSVGVDLNTASVPLLARVSGLSQTVAKSVVRWRDANGAFASRADLLK
VTGLGAKTFEQSAGFLRLRTQGPGSNPLDMTGVHPETYPVVEKIMAHTGKPVAELMGRAEMLKTLKPELFANEKFGVITV
RDIIAELEKPGRDPRPDFKVARFNEGVEDIRDLKEGMTLEGTVSNVAAFGAFVDIGVHQDGLVHVSQLANKFVNDAREVV
KTGDIVKVRVTEVDVARKRIGLTMKLGDAPPRRDGPRDNRFESARPGSQSRGGGSYGARPNAPQPSAATAMESAFSKLAA
LKK
>Mature_803_residues
MQKIIRQIATEIKVQEHQVKAAVELLDGGATVPFVARYRKEATGGLDDIQLRELEYRLGYLRELEERREAVLKSIEEQGK
LTPELRAAIELAATKQDLEDLYLPYKPKRRTKGQIAREAGIEPLADKLFADPSLNPAEEAVAFVKTEKNESDTHNVSDFT
TVQAVLDGVRDILSERWAEDAALVQSLRNWLWNEGLFSSKMVTGKDENHPDNAKFRDYFDYDEPIGRVPSHRALAVFRGR
GLEILDAKLVLPEPPESGKPTGAKATPTVSLAEGKIALHLGWSHKMRAADDLIRKCVAWTWRVKLSLSLERDLFTRLREE
AEKVAIKVFADNLRDLLLAAPAGPRVVMGLDPGIRTGVKVAVVDATGKLVETATVYPHEPRKDWDGSLHALAKLCEKHGV
NLIAIGNGTASRETDKLAADLIKLMAKVEQAIEKVVVSEAGASVYSASEFASQEMPDVDVSLRGAASIARRLQDPLAELV
KIDPKSIGVGQYQHDVNQSDLARSLDTVVEDCVNSVGVDLNTASVPLLARVSGLSQTVAKSVVRWRDANGAFASRADLLK
VTGLGAKTFEQSAGFLRLRTQGPGSNPLDMTGVHPETYPVVEKIMAHTGKPVAELMGRAEMLKTLKPELFANEKFGVITV
RDIIAELEKPGRDPRPDFKVARFNEGVEDIRDLKEGMTLEGTVSNVAAFGAFVDIGVHQDGLVHVSQLANKFVNDAREVV
KTGDIVKVRVTEVDVARKRIGLTMKLGDAPPRRDGPRDNRFESARPGSQSRGGGSYGARPNAPQPSAATAMESAFSKLAA
LKK

Specific function: Unknown

COG id: COG2183

COG function: function code K; Transcriptional accessory protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI221136781, Length=809, Percent_Identity=32.1384425216316, Blast_Score=367, Evalue=1e-101,
Organism=Homo sapiens, GI27597090, Length=633, Percent_Identity=23.2227488151659, Blast_Score=88, Evalue=3e-17,
Organism=Escherichia coli, GI87082262, Length=772, Percent_Identity=59.5854922279793, Blast_Score=863, Evalue=0.0,
Organism=Escherichia coli, GI1787140, Length=82, Percent_Identity=41.4634146341463, Blast_Score=64, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17511129, Length=458, Percent_Identity=34.061135371179, Blast_Score=224, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI17552892, Length=350, Percent_Identity=28.2857142857143, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI62484314, Length=779, Percent_Identity=30.1668806161746, Blast_Score=353, Evalue=4e-97,
Organism=Drosophila melanogaster, GI24640080, Length=462, Percent_Identity=23.1601731601732, Blast_Score=86, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR022967
- InterPro:   IPR018974
- InterPro:   IPR023097 [H]

Pfam domain/function: PF00575 S1; PF09371 Tex_N [H]

EC number: NA

Molecular weight: Translated: 87804; Mature: 87804

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKIIRQIATEIKVQEHQVKAAVELLDGGATVPFVARYRKEATGGLDDIQLRELEYRLGY
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LRELEERREAVLKSIEEQGKLTPELRAAIELAATKQDLEDLYLPYKPKRRTKGQIAREAG
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCC
IEPLADKLFADPSLNPAEEAVAFVKTEKNESDTHNVSDFTTVQAVLDGVRDILSERWAED
CCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AALVQSLRNWLWNEGLFSSKMVTGKDENHPDNAKFRDYFDYDEPIGRVPSHRALAVFRGR
HHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
GLEILDAKLVLPEPPESGKPTGAKATPTVSLAEGKIALHLGWSHKMRAADDLIRKCVAWT
CCEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHH
WRVKLSLSLERDLFTRLREEAEKVAIKVFADNLRDLLLAAPAGPRVVMGLDPGIRTGVKV
EEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEE
AVVDATGKLVETATVYPHEPRKDWDGSLHALAKLCEKHGVNLIAIGNGTASRETDKLAAD
EEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHH
LIKLMAKVEQAIEKVVVSEAGASVYSASEFASQEMPDVDVSLRGAASIARRLQDPLAELV
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHH
KIDPKSIGVGQYQHDVNQSDLARSLDTVVEDCVNSVGVDLNTASVPLLARVSGLSQTVAK
HCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
SVVRWRDANGAFASRADLLKVTGLGAKTFEQSAGFLRLRTQGPGSNPLDMTGVHPETYPV
HHHHHCCCCCCCHHHCCHHEEECCCHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHH
VEKIMAHTGKPVAELMGRAEMLKTLKPELFANEKFGVITVRDIIAELEKPGRDPRPDFKV
HHHHHHHCCCHHHHHHHHHHHHHHHCHHHHCCCCCCEEEHHHHHHHHHCCCCCCCCCCCH
ARFNEGVEDIRDLKEGMTLEGTVSNVAAFGAFVDIGVHQDGLVHVSQLANKFVNDAREVV
HHHCCCHHHHHHHHHCCEECCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHH
KTGDIVKVRVTEVDVARKRIGLTMKLGDAPPRRDGPRDNRFESARPGSQSRGGGSYGARP
HCCCEEEEEEEHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NAPQPSAATAMESAFSKLAALKK
CCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQKIIRQIATEIKVQEHQVKAAVELLDGGATVPFVARYRKEATGGLDDIQLRELEYRLGY
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LRELEERREAVLKSIEEQGKLTPELRAAIELAATKQDLEDLYLPYKPKRRTKGQIAREAG
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCC
IEPLADKLFADPSLNPAEEAVAFVKTEKNESDTHNVSDFTTVQAVLDGVRDILSERWAED
CCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AALVQSLRNWLWNEGLFSSKMVTGKDENHPDNAKFRDYFDYDEPIGRVPSHRALAVFRGR
HHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
GLEILDAKLVLPEPPESGKPTGAKATPTVSLAEGKIALHLGWSHKMRAADDLIRKCVAWT
CCEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHH
WRVKLSLSLERDLFTRLREEAEKVAIKVFADNLRDLLLAAPAGPRVVMGLDPGIRTGVKV
EEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEE
AVVDATGKLVETATVYPHEPRKDWDGSLHALAKLCEKHGVNLIAIGNGTASRETDKLAAD
EEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHH
LIKLMAKVEQAIEKVVVSEAGASVYSASEFASQEMPDVDVSLRGAASIARRLQDPLAELV
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHH
KIDPKSIGVGQYQHDVNQSDLARSLDTVVEDCVNSVGVDLNTASVPLLARVSGLSQTVAK
HCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
SVVRWRDANGAFASRADLLKVTGLGAKTFEQSAGFLRLRTQGPGSNPLDMTGVHPETYPV
HHHHHCCCCCCCHHHCCHHEEECCCHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHH
VEKIMAHTGKPVAELMGRAEMLKTLKPELFANEKFGVITVRDIIAELEKPGRDPRPDFKV
HHHHHHHCCCHHHHHHHHHHHHHHHCHHHHCCCCCCEEEHHHHHHHHHCCCCCCCCCCCH
ARFNEGVEDIRDLKEGMTLEGTVSNVAAFGAFVDIGVHQDGLVHVSQLANKFVNDAREVV
HHHCCCHHHHHHHHHCCEECCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHH
KTGDIVKVRVTEVDVARKRIGLTMKLGDAPPRRDGPRDNRFESARPGSQSRGGGSYGARP
HCCCEEEEEEEHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NAPQPSAATAMESAFSKLAALKK
CCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]