Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788397

Identifier: 91788397

GI number: 91788397

Start: 2652340

End: 2654637

Strand: Reverse

Name: 91788397

Synonym: Bpro_2535

Alternate gene names: NA

Gene position: 2654637-2652340 (Counterclockwise)

Preceding gene: 91788398

Following gene: 91788395

Centisome position: 51.05

GC content: 64.36

Gene sequence:

>2298_bases
ATGAACCGTCCCGCAGTCGCGTTGTCCGGCGATCCGCCGCACCGTGAAGCAGCGCCGGGCCAGCAAGTTCGCGTACTGTG
CGTGCTCTTTTTTTTCTCGGGTTTCCCGGCGCTGATCTACCAGTTGGTCTGGCAGCGCGCCTTGTTCCGCATCCTCGGCG
TCAACATTGAATCGGTGACGATTGTAGTGACCGCATTCATGCTCGGCCTGGGCCTCGGCGGGCTGGCGGGCGGCTGGCTG
TCGAAGCGCCAGGGCCTTCCGCTCCTGCTGCTGCTTGCTGCCATCGAGACGCTCACTGGCGCGTTCGGGCTGTTCTCACT
GTCCATTTTCGAGCGTGTCGGCGACCTGGTCCTTGGTGCACCATTGCCGCTGACGGCGCTGGTAACGTTGTCCCTGGTGG
TGGTGCCGACGCTGCTGATGGGCGCGACGCTGCCGCTGCTGGTGGGTCACCTGGTGCGGCGCTCCGGCAACGTCGGAAGT
GCGGTTGGGCAACTCTACTATGTCAACACCCTGGGCGCAGGTGCTGCCTGCCTGGTGTGTGCGGTGCTGCTGTTCCCGTT
GCTTGGCATGCAAAGCTCGGTACTGATTGCCGTGGCCTTCAACGCAGCGGTTGCGTTGGGGGCTGTCTCGGCGCATGAGG
TTGATCGTCGCCGTGTACGTCGCGCGGTCGCGCAACCCGAGCCGTCGCCAGCAACTCTAGCACCTCGCACCAGCCTGCCG
TTCGGGGTTGTGCTGGCGATGGCGGGCGCTGGGGGCCTTGTTTCGCTGTCGTACGAGATTTTCTTTTTTCGCGCTATGTC
CTACGCCAGCGGAAGCAGTTCGTTCGCGTTCGCGACGACGCTGGGGGCCTTTCTGATCGGTCTGGCTTCCGGTGCCCGGC
TGGGTGGCGAAGCCTGCGCGGGGCCGGGCGGCGAGGTGTTGATGCGCCGAATGCTGCGCGGCTTGCTCATCGCCAGCCTG
GTGGGGTTCGCGTTCCTGCCCGTACTCACGCACCTGGCGTGGCTGAATGGCGGGATTCTCGGCGTGGGCCTGCTGCTCGT
GTACCTGCTGGCGCGCCAATGGGGTCTGGTGTTGCCATGCCTGGCGCACCTCGGCGTTGCCGCCGACGCGCAGGCCGGCA
TGCGAACCGGGCTGCTGTACCTTGCAAACATCCTTGGTGCCGCGTCGGGTTCGGTGCTGACGGGCTTTGTGCTGATGGAC
CACCTGAGCTTGGTGGAAGTCGGTCAGTTGCTCGTCGTTGCGGGGCTGGGGTGCGCGCTTATCCTGGGCCTGGCGATCCC
GACGTCGCGCCGCGCCAACCTCGGACGTGCGGGCTCTATTGCGCTGGCCGGTGGGCTGGCCGTGCTGACCCTGCCTTGGG
CCAGCGACAAAGTGCTGGAGGCGCTTCAATGGAAAGGCGGACCCGAGGCCAAGGTCGCCTTCGCACAAGTCGTGGAAAAC
CGCAGCGGTATCGTCACGGTCGATCGCTCGGGCACTGTCTATGGCAATGGGGCGTACGACGGTCACTTCAACGTCGATTT
GATCCGGGATGTGAACGGCATCGTGCGCCCGTATGCGCTCAGCCTGTTCCATGCGGCGCCGCGCGAGGTGCTGATGATCG
GGCTCGCGTCCGGCTCATGGGCTCAGGTTCTGGCCAACAACCCCGAGGTGACTTTGCTCACGATCGTCGAGATCAATCCA
GGCTATGTGGGCCTCATAGCCGGCAACACCAGCGTCGCTTCGGTGCTGACCCATCCCAAGGTACGGCTGGTAACGGATGA
CGGCCGCCGCTGGTTGAGGATGAATGCACATCGGCGCTTCGACGCGATCGTTATAAACACCACATTTCACTTCCGCGCCA
ACGCGACGAACTTGCTGTCGGCCGACTTCCACGCGATCCTGAAGGAGCATCTGAACCCGAGGGGCGTCGTGTTCTACAAC
ACCACCAACTCCAGCCGGGTTCAGCGCACAGGCTGTATGAGTTTCAATCACGGAGCGCGGTTTACCAACCACCTGCTGCT
GTCGTCTACACCTATAGACTGGGACTTCATACGGTGGCGGCGCACGCTTGAAGCCTACCGCATCGATGGCCGGCCCATGC
TCGACCTCTCACGCCCCGAGCACGCCCAGGGCCTGGAGCGGCTGATGGCGCTCGAAGGCCAAACGCAGCCAGATGCGGTG
CACGCCCGGAGCGTGCCGGACGCCCCGGGCGACTGGATTGAGCCCTGCGCGCAGGTGTTGGCACGCACCGCCGGCCAGAC
CCTCGTGACGGACGACAACATGGGCACCGAGTGGCGTTATTTTTGGGATAAGCAATGA

Upstream 100 bases:

>100_bases
TGCTGGCCATCGGACTGATCGAGCTTGACCGTCGGCGCGGCGCGCGCCCCGCGATGGCCGTGAAGGCCCTGCCGGCGAGC
GGGTTGGGAACCCTGCGCCG

Downstream 100 bases:

>100_bases
GTACGGCAAAGGAGCACCCCTGGGGGTGTCTTGCCAATGACAGGCTAGCGGCTCTAAAAGTGCTCAAATAAGTCATACGA
GCCATCAGTTTCTTGGGGCC

Product: putative spermidine synthase

Products: NA

Alternate protein names: Integral Membrane Protein; Inner Membrane Protein; Spermine Synthase

Number of amino acids: Translated: 765; Mature: 765

Protein sequence:

>765_residues
MNRPAVALSGDPPHREAAPGQQVRVLCVLFFFSGFPALIYQLVWQRALFRILGVNIESVTIVVTAFMLGLGLGGLAGGWL
SKRQGLPLLLLLAAIETLTGAFGLFSLSIFERVGDLVLGAPLPLTALVTLSLVVVPTLLMGATLPLLVGHLVRRSGNVGS
AVGQLYYVNTLGAGAACLVCAVLLFPLLGMQSSVLIAVAFNAAVALGAVSAHEVDRRRVRRAVAQPEPSPATLAPRTSLP
FGVVLAMAGAGGLVSLSYEIFFFRAMSYASGSSSFAFATTLGAFLIGLASGARLGGEACAGPGGEVLMRRMLRGLLIASL
VGFAFLPVLTHLAWLNGGILGVGLLLVYLLARQWGLVLPCLAHLGVAADAQAGMRTGLLYLANILGAASGSVLTGFVLMD
HLSLVEVGQLLVVAGLGCALILGLAIPTSRRANLGRAGSIALAGGLAVLTLPWASDKVLEALQWKGGPEAKVAFAQVVEN
RSGIVTVDRSGTVYGNGAYDGHFNVDLIRDVNGIVRPYALSLFHAAPREVLMIGLASGSWAQVLANNPEVTLLTIVEINP
GYVGLIAGNTSVASVLTHPKVRLVTDDGRRWLRMNAHRRFDAIVINTTFHFRANATNLLSADFHAILKEHLNPRGVVFYN
TTNSSRVQRTGCMSFNHGARFTNHLLLSSTPIDWDFIRWRRTLEAYRIDGRPMLDLSRPEHAQGLERLMALEGQTQPDAV
HARSVPDAPGDWIEPCAQVLARTAGQTLVTDDNMGTEWRYFWDKQ

Sequences:

>Translated_765_residues
MNRPAVALSGDPPHREAAPGQQVRVLCVLFFFSGFPALIYQLVWQRALFRILGVNIESVTIVVTAFMLGLGLGGLAGGWL
SKRQGLPLLLLLAAIETLTGAFGLFSLSIFERVGDLVLGAPLPLTALVTLSLVVVPTLLMGATLPLLVGHLVRRSGNVGS
AVGQLYYVNTLGAGAACLVCAVLLFPLLGMQSSVLIAVAFNAAVALGAVSAHEVDRRRVRRAVAQPEPSPATLAPRTSLP
FGVVLAMAGAGGLVSLSYEIFFFRAMSYASGSSSFAFATTLGAFLIGLASGARLGGEACAGPGGEVLMRRMLRGLLIASL
VGFAFLPVLTHLAWLNGGILGVGLLLVYLLARQWGLVLPCLAHLGVAADAQAGMRTGLLYLANILGAASGSVLTGFVLMD
HLSLVEVGQLLVVAGLGCALILGLAIPTSRRANLGRAGSIALAGGLAVLTLPWASDKVLEALQWKGGPEAKVAFAQVVEN
RSGIVTVDRSGTVYGNGAYDGHFNVDLIRDVNGIVRPYALSLFHAAPREVLMIGLASGSWAQVLANNPEVTLLTIVEINP
GYVGLIAGNTSVASVLTHPKVRLVTDDGRRWLRMNAHRRFDAIVINTTFHFRANATNLLSADFHAILKEHLNPRGVVFYN
TTNSSRVQRTGCMSFNHGARFTNHLLLSSTPIDWDFIRWRRTLEAYRIDGRPMLDLSRPEHAQGLERLMALEGQTQPDAV
HARSVPDAPGDWIEPCAQVLARTAGQTLVTDDNMGTEWRYFWDKQ
>Mature_765_residues
MNRPAVALSGDPPHREAAPGQQVRVLCVLFFFSGFPALIYQLVWQRALFRILGVNIESVTIVVTAFMLGLGLGGLAGGWL
SKRQGLPLLLLLAAIETLTGAFGLFSLSIFERVGDLVLGAPLPLTALVTLSLVVVPTLLMGATLPLLVGHLVRRSGNVGS
AVGQLYYVNTLGAGAACLVCAVLLFPLLGMQSSVLIAVAFNAAVALGAVSAHEVDRRRVRRAVAQPEPSPATLAPRTSLP
FGVVLAMAGAGGLVSLSYEIFFFRAMSYASGSSSFAFATTLGAFLIGLASGARLGGEACAGPGGEVLMRRMLRGLLIASL
VGFAFLPVLTHLAWLNGGILGVGLLLVYLLARQWGLVLPCLAHLGVAADAQAGMRTGLLYLANILGAASGSVLTGFVLMD
HLSLVEVGQLLVVAGLGCALILGLAIPTSRRANLGRAGSIALAGGLAVLTLPWASDKVLEALQWKGGPEAKVAFAQVVEN
RSGIVTVDRSGTVYGNGAYDGHFNVDLIRDVNGIVRPYALSLFHAAPREVLMIGLASGSWAQVLANNPEVTLLTIVEINP
GYVGLIAGNTSVASVLTHPKVRLVTDDGRRWLRMNAHRRFDAIVINTTFHFRANATNLLSADFHAILKEHLNPRGVVFYN
TTNSSRVQRTGCMSFNHGARFTNHLLLSSTPIDWDFIRWRRTLEAYRIDGRPMLDLSRPEHAQGLERLMALEGQTQPDAV
HARSVPDAPGDWIEPCAQVLARTAGQTLVTDDNMGTEWRYFWDKQ

Specific function: Unknown

COG id: COG0421

COG function: function code E; Spermidine synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81407; Mature: 81407

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRPAVALSGDPPHREAAPGQQVRVLCVLFFFSGFPALIYQLVWQRALFRILGVNIESVT
CCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHH
IVVTAFMLGLGLGGLAGGWLSKRQGLPLLLLLAAIETLTGAFGLFSLSIFERVGDLVLGA
HHHHHHHHHHCCCHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PLPLTALVTLSLVVVPTLLMGATLPLLVGHLVRRSGNVGSAVGQLYYVNTLGAGAACLVC
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEEEECCCCHHHHHH
AVLLFPLLGMQSSVLIAVAFNAAVALGAVSAHEVDRRRVRRAVAQPEPSPATLAPRTSLP
HHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
FGVVLAMAGAGGLVSLSYEIFFFRAMSYASGSSSFAFATTLGAFLIGLASGARLGGEACA
HHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
GPGGEVLMRRMLRGLLIASLVGFAFLPVLTHLAWLNGGILGVGLLLVYLLARQWGLVLPC
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHH
LAHLGVAADAQAGMRTGLLYLANILGAASGSVLTGFVLMDHLSLVEVGQLLVVAGLGCAL
HHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILGLAIPTSRRANLGRAGSIALAGGLAVLTLPWASDKVLEALQWKGGPEAKVAFAQVVEN
HHHHCCCCCCCCCCCCCCCEEEECCEEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHC
RSGIVTVDRSGTVYGNGAYDGHFNVDLIRDVNGIVRPYALSLFHAAPREVLMIGLASGSW
CCCEEEECCCCEEEECCCCCCCCCEEHHHHCHHHHHHHHHHHHHCCCCEEEEEEECCCCH
AQVLANNPEVTLLTIVEINPGYVGLIAGNTSVASVLTHPKVRLVTDDGRRWLRMNAHRRF
HHHHCCCCCEEEEEEEEECCCEEEEEECCCHHHHHHCCCEEEEEECCCCEEEEECCCCCE
DAIVINTTFHFRANATNLLSADFHAILKEHLNPRGVVFYNTTNSSRVQRTGCMSFNHGAR
EEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHCCCCCCCCCH
FTNHLLLSSTPIDWDFIRWRRTLEAYRIDGRPMLDLSRPEHAQGLERLMALEGQTQPDAV
HHHEEEEECCCCCHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHCCCCCCCCE
HARSVPDAPGDWIEPCAQVLARTAGQTLVTDDNMGTEWRYFWDKQ
ECCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCC
>Mature Secondary Structure
MNRPAVALSGDPPHREAAPGQQVRVLCVLFFFSGFPALIYQLVWQRALFRILGVNIESVT
CCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHH
IVVTAFMLGLGLGGLAGGWLSKRQGLPLLLLLAAIETLTGAFGLFSLSIFERVGDLVLGA
HHHHHHHHHHCCCHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PLPLTALVTLSLVVVPTLLMGATLPLLVGHLVRRSGNVGSAVGQLYYVNTLGAGAACLVC
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEEEECCCCHHHHHH
AVLLFPLLGMQSSVLIAVAFNAAVALGAVSAHEVDRRRVRRAVAQPEPSPATLAPRTSLP
HHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
FGVVLAMAGAGGLVSLSYEIFFFRAMSYASGSSSFAFATTLGAFLIGLASGARLGGEACA
HHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
GPGGEVLMRRMLRGLLIASLVGFAFLPVLTHLAWLNGGILGVGLLLVYLLARQWGLVLPC
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHH
LAHLGVAADAQAGMRTGLLYLANILGAASGSVLTGFVLMDHLSLVEVGQLLVVAGLGCAL
HHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILGLAIPTSRRANLGRAGSIALAGGLAVLTLPWASDKVLEALQWKGGPEAKVAFAQVVEN
HHHHCCCCCCCCCCCCCCCEEEECCEEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHC
RSGIVTVDRSGTVYGNGAYDGHFNVDLIRDVNGIVRPYALSLFHAAPREVLMIGLASGSW
CCCEEEECCCCEEEECCCCCCCCCEEHHHHCHHHHHHHHHHHHHCCCCEEEEEEECCCCH
AQVLANNPEVTLLTIVEINPGYVGLIAGNTSVASVLTHPKVRLVTDDGRRWLRMNAHRRF
HHHHCCCCCEEEEEEEEECCCEEEEEECCCHHHHHHCCCEEEEEECCCCEEEEECCCCCE
DAIVINTTFHFRANATNLLSADFHAILKEHLNPRGVVFYNTTNSSRVQRTGCMSFNHGAR
EEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHCCCCCCCCCH
FTNHLLLSSTPIDWDFIRWRRTLEAYRIDGRPMLDLSRPEHAQGLERLMALEGQTQPDAV
HHHEEEEECCCCCHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHCCCCCCCCE
HARSVPDAPGDWIEPCAQVLARTAGQTLVTDDNMGTEWRYFWDKQ
ECCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA