| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is wtpB [H]
Identifier: 91788361
GI number: 91788361
Start: 2615537
End: 2616328
Strand: Direct
Name: wtpB [H]
Synonym: Bpro_2498
Alternate gene names: 91788361
Gene position: 2615537-2616328 (Clockwise)
Preceding gene: 91788360
Following gene: 91788362
Centisome position: 50.3
GC content: 62.75
Gene sequence:
>792_bases ATGCCGGGTGACATCTACGCGGCTGACGGCTTGCGGCACTCGCGCACACCGGCGCTGATAGGTGCGCTGACCTTAGCGCT TATCGCCGGGCCGTTCATCGGTTTGGCATTTGCCACGCAGTGGGGAAAATTTCACTTCGCGCCGGGCGACATGGGATCTA TTGGGGTATCGCTGGGTTACAGCCTGATCGCGCTGGTCCTGATCATTGCCCTCGGTACGCCGCTGGCATGGTGGCTGGCG CGGCAATCGTTCCGCGGCAAGTGGGTGCTGGAGGCCATCATTCTGCTGGCCTTGCTCACCCCGCCGCTGGCAATGGGCAT TTTGCTCACCACGCTGTTCGGTCCTTATGGTCCGATAGGCAATCTGGCTGCCCGCGCGGGCGTGGAGTTCACCAACTCGG CCCTGGCCTTTGTGCTCGCGCAGTTCTACGGGGCCTTGCCTTACTACGTGCTGGCGGCCCGTGCCGCGTTTGAAGGTGTG CCGCGCGAGCTGGAACACATCGCGCTGACCCTGGGCAAATCGCCGTGGCAGACATTCCTGCAGGTCAGCATGCCGCTGGC GCGACTGGGTTTGGCGGCCGGCATTGCTTTGGCCTGGGTGCGGGCGCTGGGCGAGTTCGGCATCGTGCTGATCCTGGCTT ATTACCCGCAGGGCATACCGGTCAAGCTCTGGGTCAATCTGCAGGATATCGGGCTGTCTTCCGTGTACCCGCTGCTGTGG GCATTTTTTCTGGTGGCGATGCCTTTGCCCTTGATCCTTGGCTTGCTTTCGCGCCGCCAAGGCCTGTTCTGA
Upstream 100 bases:
>100_bases ACGGCTACAGCCCACCCAAGGGCGGCCCGATTCAATAGCCAGCTGAACGCCGTGAACTCTCTATTCGACGCTGTGGGCCC AACCTCGACATCGCATAAGC
Downstream 100 bases:
>100_bases GTTCATGCGCATCGACTATCAGATCGATCATCCGATACGGCTGCAGGCCAGCCTGGAGGTCGAGGGCTTTACCGTCCTGC TCGGGCAAAGCGGCGAAGGC
Product: binding-protein-dependent transport systems inner membrane component
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MPGDIYAADGLRHSRTPALIGALTLALIAGPFIGLAFATQWGKFHFAPGDMGSIGVSLGYSLIALVLIIALGTPLAWWLA RQSFRGKWVLEAIILLALLTPPLAMGILLTTLFGPYGPIGNLAARAGVEFTNSALAFVLAQFYGALPYYVLAARAAFEGV PRELEHIALTLGKSPWQTFLQVSMPLARLGLAAGIALAWVRALGEFGIVLILAYYPQGIPVKLWVNLQDIGLSSVYPLLW AFFLVAMPLPLILGLLSRRQGLF
Sequences:
>Translated_263_residues MPGDIYAADGLRHSRTPALIGALTLALIAGPFIGLAFATQWGKFHFAPGDMGSIGVSLGYSLIALVLIIALGTPLAWWLA RQSFRGKWVLEAIILLALLTPPLAMGILLTTLFGPYGPIGNLAARAGVEFTNSALAFVLAQFYGALPYYVLAARAAFEGV PRELEHIALTLGKSPWQTFLQVSMPLARLGLAAGIALAWVRALGEFGIVLILAYYPQGIPVKLWVNLQDIGLSSVYPLLW AFFLVAMPLPLILGLLSRRQGLF >Mature_262_residues PGDIYAADGLRHSRTPALIGALTLALIAGPFIGLAFATQWGKFHFAPGDMGSIGVSLGYSLIALVLIIALGTPLAWWLAR QSFRGKWVLEAIILLALLTPPLAMGILLTTLFGPYGPIGNLAARAGVEFTNSALAFVLAQFYGALPYYVLAARAAFEGVP RELEHIALTLGKSPWQTFLQVSMPLARLGLAAGIALAWVRALGEFGIVLILAYYPQGIPVKLWVNLQDIGLSSVYPLLWA FFLVAMPLPLILGLLSRRQGLF
Specific function: Part of the ABC transporter complex wtpABC involved in molybdate/tungstate import. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]
COG id: COG0555
COG function: function code O; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=186, Percent_Identity=29.5698924731183, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1786980, Length=184, Percent_Identity=35.3260869565217, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI87082099, Length=166, Percent_Identity=26.5060240963855, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 28225; Mature: 28094
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGDIYAADGLRHSRTPALIGALTLALIAGPFIGLAFATQWGKFHFAPGDMGSIGVSLGY CCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHH SLIALVLIIALGTPLAWWLARQSFRGKWVLEAIILLALLTPPLAMGILLTTLFGPYGPIG HHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH NLAARAGVEFTNSALAFVLAQFYGALPYYVLAARAAFEGVPRELEHIALTLGKSPWQTFL HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHH QVSMPLARLGLAAGIALAWVRALGEFGIVLILAYYPQGIPVKLWVNLQDIGLSSVYPLLW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCHHHHHHHHH AFFLVAMPLPLILGLLSRRQGLF HHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PGDIYAADGLRHSRTPALIGALTLALIAGPFIGLAFATQWGKFHFAPGDMGSIGVSLGY CCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHH SLIALVLIIALGTPLAWWLARQSFRGKWVLEAIILLALLTPPLAMGILLTTLFGPYGPIG HHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH NLAARAGVEFTNSALAFVLAQFYGALPYYVLAARAAFEGVPRELEHIALTLGKSPWQTFL HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHH QVSMPLARLGLAAGIALAWVRALGEFGIVLILAYYPQGIPVKLWVNLQDIGLSSVYPLLW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCHHHHHHHHH AFFLVAMPLPLILGLLSRRQGLF HHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]