Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788355

Identifier: 91788355

GI number: 91788355

Start: 2610061

End: 2611377

Strand: Direct

Name: 91788355

Synonym: Bpro_2492

Alternate gene names: NA

Gene position: 2610061-2611377 (Clockwise)

Preceding gene: 91788350

Following gene: 91788356

Centisome position: 50.19

GC content: 67.81

Gene sequence:

>1317_bases
ATGCTCGAAGTCCTCGCCAACCGCACCTATCGGCACCTGTTTCTGGCGCAGGTGATTGCCCTCCTGGGAACCGGGCTGGC
CACCGTCGCGCTGAGCCTGCTGGCCTTTGACCTGGCCGGCGCCAATGCCGGCGCCGTCCTGGGCACGGCGCTGGCCATCA
AAATGCTGGCCTACATTGGCGTCGCGCCGGTGGCCTCGGCCCTGGCCGAACGCCTGCCGCGGCGCGCCGTGCTGGTCGCG
CTGGACCTGGTCCGCGCCGGCGTTGCGCTGCTTTTGCCGTTCGTGACGCAGATCTGGCATGTCTATGTGCTGATTTTTGT
GCTGCAGTCGGCGTCCGCGGCCTTCACGCCGACCTTTCAGGCGACCATTCCCGATGTGTTGCCGCAGGAAGAGGCCTATA
CCAAGGCTCTGTCCCTGTCGCGGCTGGCCTATGACCTGGAAAGCCTGGTCAGCCCGATGCTGGCGGCGCTCCTCCTGACC
GTGGTGAGCTACCACAGCCTGTTCGGCGGCACCGTGGTCGGGTTTCTGGCATCGGCGGCGCTCGTGGTCTCGGCCATCCT
GCCGCGCGCCAAGATGCCGCCCAAGCGCAGCATTTACGAGCGCACCACACGCGGACTGCGGATCTACCTGGCCACACCTC
GCCTGCGCGGCCTGCTGGCGCTCAACCTGGCGATCGCTTCAGGCAGCGCCATGGTCATCGTCAACACCGTGGTGCTGGTG
CAGTCCGGCTTTGGCATGACGCAGACCGCCACCGCCATCGCGCTGGCCTGTTTCGGTGCCGGCTCCATGCTGGTGGCGCT
GGCCTTGCCCAAATTGCTCGACCGGGTGCCGGAACGCCGCGCGATGCTGGCCGGGGCCGGCTTGATCGCGCTGGGCCTTC
TGGCCGGCTGGGGTCTGGCTGTTCACTACGCCGTCCTGTTGCCGCTGTGGTTTGTGCTGGGCCTGGGTTACTCCCTGGCG
CAAACCCCCTCCGGGCGCCTGCTGCGCCGGTCGTCCGGCGACGCCGACAGGCCGGCGCTTTTTGCGGCGCAATTTGCCCT
GTCCCACGCCTGCTGGCTCATCACTTACCCCCTGGCCGGCTGGCTGGGCGCCAAGTTCGGCCTGGCCGCCAGCTTTGCCA
CCCTGGGCTTGGTGGCCAGCGCCGCCGTGCTGCTCTCGGCCCGTCTGTGGCCTGCCGAAGACCCCATCGAACTCTTGCAC
CGACATGATGATTTGGCGCAGGACCACCCCCACCTGGTGCAGGACGATGCGGCCGCGTCAACCCGGCATTCGCATGCCTT
TGTCATTGACGACGAGCACCAGCGCTGGCCGACCTGA

Upstream 100 bases:

>100_bases
GGGCATTGCATATCCTATCCCCCAGGATAAGCTACAGTCAAGTCACCATACCGTTCCCCCTGCGGGCGGGTTTTGAATAG
CAGCCGTCGGAGTTACCCCC

Downstream 100 bases:

>100_bases
GGCGGCTCGGGACGGCTGGGATGCCGGGATGCCGGGATGCCGGGATGCCGAGGCTGATTTATCCCCACCCCCAGGATAGG
TAGGTACAATTCAGGGTTTT

Product: major facilitator transporter

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Nickel Resistance Protein; NreB Protein; Transporter Facilitator Family; MFS Ni2+ Efflux Pump NreB; MFS Transporter; MFS Family Transporter Protein; NrbE-Like Protein; NcrA-Like Facilitator Superfamily Permease; Integral Membrane Protein; Nickel-Resistant Pritein NcrA; Nickel Resistance; Permeases Of Facilitator Superfamily

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MLEVLANRTYRHLFLAQVIALLGTGLATVALSLLAFDLAGANAGAVLGTALAIKMLAYIGVAPVASALAERLPRRAVLVA
LDLVRAGVALLLPFVTQIWHVYVLIFVLQSASAAFTPTFQATIPDVLPQEEAYTKALSLSRLAYDLESLVSPMLAALLLT
VVSYHSLFGGTVVGFLASAALVVSAILPRAKMPPKRSIYERTTRGLRIYLATPRLRGLLALNLAIASGSAMVIVNTVVLV
QSGFGMTQTATAIALACFGAGSMLVALALPKLLDRVPERRAMLAGAGLIALGLLAGWGLAVHYAVLLPLWFVLGLGYSLA
QTPSGRLLRRSSGDADRPALFAAQFALSHACWLITYPLAGWLGAKFGLAASFATLGLVASAAVLLSARLWPAEDPIELLH
RHDDLAQDHPHLVQDDAAASTRHSHAFVIDDEHQRWPT

Sequences:

>Translated_438_residues
MLEVLANRTYRHLFLAQVIALLGTGLATVALSLLAFDLAGANAGAVLGTALAIKMLAYIGVAPVASALAERLPRRAVLVA
LDLVRAGVALLLPFVTQIWHVYVLIFVLQSASAAFTPTFQATIPDVLPQEEAYTKALSLSRLAYDLESLVSPMLAALLLT
VVSYHSLFGGTVVGFLASAALVVSAILPRAKMPPKRSIYERTTRGLRIYLATPRLRGLLALNLAIASGSAMVIVNTVVLV
QSGFGMTQTATAIALACFGAGSMLVALALPKLLDRVPERRAMLAGAGLIALGLLAGWGLAVHYAVLLPLWFVLGLGYSLA
QTPSGRLLRRSSGDADRPALFAAQFALSHACWLITYPLAGWLGAKFGLAASFATLGLVASAAVLLSARLWPAEDPIELLH
RHDDLAQDHPHLVQDDAAASTRHSHAFVIDDEHQRWPT
>Mature_438_residues
MLEVLANRTYRHLFLAQVIALLGTGLATVALSLLAFDLAGANAGAVLGTALAIKMLAYIGVAPVASALAERLPRRAVLVA
LDLVRAGVALLLPFVTQIWHVYVLIFVLQSASAAFTPTFQATIPDVLPQEEAYTKALSLSRLAYDLESLVSPMLAALLLT
VVSYHSLFGGTVVGFLASAALVVSAILPRAKMPPKRSIYERTTRGLRIYLATPRLRGLLALNLAIASGSAMVIVNTVVLV
QSGFGMTQTATAIALACFGAGSMLVALALPKLLDRVPERRAMLAGAGLIALGLLAGWGLAVHYAVLLPLWFVLGLGYSLA
QTPSGRLLRRSSGDADRPALFAAQFALSHACWLITYPLAGWLGAKFGLAASFATLGLVASAAVLLSARLWPAEDPIELLH
RHDDLAQDHPHLVQDDAAASTRHSHAFVIDDEHQRWPT

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46433; Mature: 46433

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEVLANRTYRHLFLAQVIALLGTGLATVALSLLAFDLAGANAGAVLGTALAIKMLAYIG
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
VAPVASALAERLPRRAVLVALDLVRAGVALLLPFVTQIWHVYVLIFVLQSASAAFTPTFQ
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
ATIPDVLPQEEAYTKALSLSRLAYDLESLVSPMLAALLLTVVSYHSLFGGTVVGFLASAA
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVVSAILPRAKMPPKRSIYERTTRGLRIYLATPRLRGLLALNLAIASGSAMVIVNTVVLV
HHHHHHHCCCCCCCCHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEHHHHHHHHH
QSGFGMTQTATAIALACFGAGSMLVALALPKLLDRVPERRAMLAGAGLIALGLLAGWGLA
HCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
VHYAVLLPLWFVLGLGYSLAQTPSGRLLRRSSGDADRPALFAAQFALSHACWLITYPLAG
HHHHHHHHHHHHHHCCCHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
WLGAKFGLAASFATLGLVASAAVLLSARLWPAEDPIELLHRHDDLAQDHPHLVQDDAAAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHC
TRHSHAFVIDDEHQRWPT
CCCCEEEEECCCCCCCCC
>Mature Secondary Structure
MLEVLANRTYRHLFLAQVIALLGTGLATVALSLLAFDLAGANAGAVLGTALAIKMLAYIG
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
VAPVASALAERLPRRAVLVALDLVRAGVALLLPFVTQIWHVYVLIFVLQSASAAFTPTFQ
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
ATIPDVLPQEEAYTKALSLSRLAYDLESLVSPMLAALLLTVVSYHSLFGGTVVGFLASAA
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVVSAILPRAKMPPKRSIYERTTRGLRIYLATPRLRGLLALNLAIASGSAMVIVNTVVLV
HHHHHHHCCCCCCCCHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEHHHHHHHHH
QSGFGMTQTATAIALACFGAGSMLVALALPKLLDRVPERRAMLAGAGLIALGLLAGWGLA
HCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
VHYAVLLPLWFVLGLGYSLAQTPSGRLLRRSSGDADRPALFAAQFALSHACWLITYPLAG
HHHHHHHHHHHHHHCCCHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
WLGAKFGLAASFATLGLVASAAVLLSARLWPAEDPIELLHRHDDLAQDHPHLVQDDAAAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHC
TRHSHAFVIDDEHQRWPT
CCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA