| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788355
Identifier: 91788355
GI number: 91788355
Start: 2610061
End: 2611377
Strand: Direct
Name: 91788355
Synonym: Bpro_2492
Alternate gene names: NA
Gene position: 2610061-2611377 (Clockwise)
Preceding gene: 91788350
Following gene: 91788356
Centisome position: 50.19
GC content: 67.81
Gene sequence:
>1317_bases ATGCTCGAAGTCCTCGCCAACCGCACCTATCGGCACCTGTTTCTGGCGCAGGTGATTGCCCTCCTGGGAACCGGGCTGGC CACCGTCGCGCTGAGCCTGCTGGCCTTTGACCTGGCCGGCGCCAATGCCGGCGCCGTCCTGGGCACGGCGCTGGCCATCA AAATGCTGGCCTACATTGGCGTCGCGCCGGTGGCCTCGGCCCTGGCCGAACGCCTGCCGCGGCGCGCCGTGCTGGTCGCG CTGGACCTGGTCCGCGCCGGCGTTGCGCTGCTTTTGCCGTTCGTGACGCAGATCTGGCATGTCTATGTGCTGATTTTTGT GCTGCAGTCGGCGTCCGCGGCCTTCACGCCGACCTTTCAGGCGACCATTCCCGATGTGTTGCCGCAGGAAGAGGCCTATA CCAAGGCTCTGTCCCTGTCGCGGCTGGCCTATGACCTGGAAAGCCTGGTCAGCCCGATGCTGGCGGCGCTCCTCCTGACC GTGGTGAGCTACCACAGCCTGTTCGGCGGCACCGTGGTCGGGTTTCTGGCATCGGCGGCGCTCGTGGTCTCGGCCATCCT GCCGCGCGCCAAGATGCCGCCCAAGCGCAGCATTTACGAGCGCACCACACGCGGACTGCGGATCTACCTGGCCACACCTC GCCTGCGCGGCCTGCTGGCGCTCAACCTGGCGATCGCTTCAGGCAGCGCCATGGTCATCGTCAACACCGTGGTGCTGGTG CAGTCCGGCTTTGGCATGACGCAGACCGCCACCGCCATCGCGCTGGCCTGTTTCGGTGCCGGCTCCATGCTGGTGGCGCT GGCCTTGCCCAAATTGCTCGACCGGGTGCCGGAACGCCGCGCGATGCTGGCCGGGGCCGGCTTGATCGCGCTGGGCCTTC TGGCCGGCTGGGGTCTGGCTGTTCACTACGCCGTCCTGTTGCCGCTGTGGTTTGTGCTGGGCCTGGGTTACTCCCTGGCG CAAACCCCCTCCGGGCGCCTGCTGCGCCGGTCGTCCGGCGACGCCGACAGGCCGGCGCTTTTTGCGGCGCAATTTGCCCT GTCCCACGCCTGCTGGCTCATCACTTACCCCCTGGCCGGCTGGCTGGGCGCCAAGTTCGGCCTGGCCGCCAGCTTTGCCA CCCTGGGCTTGGTGGCCAGCGCCGCCGTGCTGCTCTCGGCCCGTCTGTGGCCTGCCGAAGACCCCATCGAACTCTTGCAC CGACATGATGATTTGGCGCAGGACCACCCCCACCTGGTGCAGGACGATGCGGCCGCGTCAACCCGGCATTCGCATGCCTT TGTCATTGACGACGAGCACCAGCGCTGGCCGACCTGA
Upstream 100 bases:
>100_bases GGGCATTGCATATCCTATCCCCCAGGATAAGCTACAGTCAAGTCACCATACCGTTCCCCCTGCGGGCGGGTTTTGAATAG CAGCCGTCGGAGTTACCCCC
Downstream 100 bases:
>100_bases GGCGGCTCGGGACGGCTGGGATGCCGGGATGCCGGGATGCCGGGATGCCGAGGCTGATTTATCCCCACCCCCAGGATAGG TAGGTACAATTCAGGGTTTT
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Nickel Resistance Protein; NreB Protein; Transporter Facilitator Family; MFS Ni2+ Efflux Pump NreB; MFS Transporter; MFS Family Transporter Protein; NrbE-Like Protein; NcrA-Like Facilitator Superfamily Permease; Integral Membrane Protein; Nickel-Resistant Pritein NcrA; Nickel Resistance; Permeases Of Facilitator Superfamily
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MLEVLANRTYRHLFLAQVIALLGTGLATVALSLLAFDLAGANAGAVLGTALAIKMLAYIGVAPVASALAERLPRRAVLVA LDLVRAGVALLLPFVTQIWHVYVLIFVLQSASAAFTPTFQATIPDVLPQEEAYTKALSLSRLAYDLESLVSPMLAALLLT VVSYHSLFGGTVVGFLASAALVVSAILPRAKMPPKRSIYERTTRGLRIYLATPRLRGLLALNLAIASGSAMVIVNTVVLV QSGFGMTQTATAIALACFGAGSMLVALALPKLLDRVPERRAMLAGAGLIALGLLAGWGLAVHYAVLLPLWFVLGLGYSLA QTPSGRLLRRSSGDADRPALFAAQFALSHACWLITYPLAGWLGAKFGLAASFATLGLVASAAVLLSARLWPAEDPIELLH RHDDLAQDHPHLVQDDAAASTRHSHAFVIDDEHQRWPT
Sequences:
>Translated_438_residues MLEVLANRTYRHLFLAQVIALLGTGLATVALSLLAFDLAGANAGAVLGTALAIKMLAYIGVAPVASALAERLPRRAVLVA LDLVRAGVALLLPFVTQIWHVYVLIFVLQSASAAFTPTFQATIPDVLPQEEAYTKALSLSRLAYDLESLVSPMLAALLLT VVSYHSLFGGTVVGFLASAALVVSAILPRAKMPPKRSIYERTTRGLRIYLATPRLRGLLALNLAIASGSAMVIVNTVVLV QSGFGMTQTATAIALACFGAGSMLVALALPKLLDRVPERRAMLAGAGLIALGLLAGWGLAVHYAVLLPLWFVLGLGYSLA QTPSGRLLRRSSGDADRPALFAAQFALSHACWLITYPLAGWLGAKFGLAASFATLGLVASAAVLLSARLWPAEDPIELLH RHDDLAQDHPHLVQDDAAASTRHSHAFVIDDEHQRWPT >Mature_438_residues MLEVLANRTYRHLFLAQVIALLGTGLATVALSLLAFDLAGANAGAVLGTALAIKMLAYIGVAPVASALAERLPRRAVLVA LDLVRAGVALLLPFVTQIWHVYVLIFVLQSASAAFTPTFQATIPDVLPQEEAYTKALSLSRLAYDLESLVSPMLAALLLT VVSYHSLFGGTVVGFLASAALVVSAILPRAKMPPKRSIYERTTRGLRIYLATPRLRGLLALNLAIASGSAMVIVNTVVLV QSGFGMTQTATAIALACFGAGSMLVALALPKLLDRVPERRAMLAGAGLIALGLLAGWGLAVHYAVLLPLWFVLGLGYSLA QTPSGRLLRRSSGDADRPALFAAQFALSHACWLITYPLAGWLGAKFGLAASFATLGLVASAAVLLSARLWPAEDPIELLH RHDDLAQDHPHLVQDDAAASTRHSHAFVIDDEHQRWPT
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46433; Mature: 46433
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEVLANRTYRHLFLAQVIALLGTGLATVALSLLAFDLAGANAGAVLGTALAIKMLAYIG CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH VAPVASALAERLPRRAVLVALDLVRAGVALLLPFVTQIWHVYVLIFVLQSASAAFTPTFQ HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH ATIPDVLPQEEAYTKALSLSRLAYDLESLVSPMLAALLLTVVSYHSLFGGTVVGFLASAA HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVVSAILPRAKMPPKRSIYERTTRGLRIYLATPRLRGLLALNLAIASGSAMVIVNTVVLV HHHHHHHCCCCCCCCHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEHHHHHHHHH QSGFGMTQTATAIALACFGAGSMLVALALPKLLDRVPERRAMLAGAGLIALGLLAGWGLA HCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH VHYAVLLPLWFVLGLGYSLAQTPSGRLLRRSSGDADRPALFAAQFALSHACWLITYPLAG HHHHHHHHHHHHHHCCCHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH WLGAKFGLAASFATLGLVASAAVLLSARLWPAEDPIELLHRHDDLAQDHPHLVQDDAAAS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHC TRHSHAFVIDDEHQRWPT CCCCEEEEECCCCCCCCC >Mature Secondary Structure MLEVLANRTYRHLFLAQVIALLGTGLATVALSLLAFDLAGANAGAVLGTALAIKMLAYIG CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH VAPVASALAERLPRRAVLVALDLVRAGVALLLPFVTQIWHVYVLIFVLQSASAAFTPTFQ HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH ATIPDVLPQEEAYTKALSLSRLAYDLESLVSPMLAALLLTVVSYHSLFGGTVVGFLASAA HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVVSAILPRAKMPPKRSIYERTTRGLRIYLATPRLRGLLALNLAIASGSAMVIVNTVVLV HHHHHHHCCCCCCCCHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEHHHHHHHHH QSGFGMTQTATAIALACFGAGSMLVALALPKLLDRVPERRAMLAGAGLIALGLLAGWGLA HCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH VHYAVLLPLWFVLGLGYSLAQTPSGRLLRRSSGDADRPALFAAQFALSHACWLITYPLAG HHHHHHHHHHHHHHCCCHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH WLGAKFGLAASFATLGLVASAAVLLSARLWPAEDPIELLHRHDDLAQDHPHLVQDDAAAS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHC TRHSHAFVIDDEHQRWPT CCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA