Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yejE [H]

Identifier: 91788287

GI number: 91788287

Start: 2521373

End: 2522515

Strand: Direct

Name: yejE [H]

Synonym: Bpro_2422

Alternate gene names: 91788287

Gene position: 2521373-2522515 (Clockwise)

Preceding gene: 91788286

Following gene: 91788288

Centisome position: 48.49

GC content: 61.5

Gene sequence:

>1143_bases
GTGTTAAATTTGACTGACCCCCCCGAAGCGGCCGTTGGCCGCCTCCCCCCCGAGGGGGCGCCGCTGGCGGACGGGCGGAG
CCCGATCCGCGGCGGCCTTGGTGAAAACCGTTCTGTGGTCAGTCTTAGTCCGGGTCGGCGGGCGTGGAAGCGTTTTCGCC
GCAACAAGCTTGGGTTTTACAGCCTGATCCTGTTTTCGACTCTGGTGGTGCTCAGCCTCTTCGCCGAGGTGCTGTCCAAC
GACACGCCGCTGGTGGCCCACTACAAGGGCGAGTATTACTTTCCGCTGCTCAAGGACTATTCGGAAAAGACCTTTGACGG
CGACTTTGAAACGCCCACCGACTACCTGGACCCTTTCATCCGCGAGAAGCTGGGGCAGGGGGGCAACTGGGCGCTGTACC
CGCCCAACCCTTACGGCCCGCGCACGATCAACTATTTTGCAAAAGAACCCAACCCTTCGGCGCCTTCACGCGACAACCTG
CTGGGCACGGACGACCGGGGGCGCGACCTGCTGGCGCAGCTGATCTATGGCTTTCGATTAAGCGTGCTGTTCGGTCTGGC
ACTGACAGTGATTGGCGTGGTGATCGGCGTGATCACCGGGGCCGTTCAGGGGTATGCCGGCGGCAAAACAGACCTCGCCT
TCCAGCGGTTCATGGAAATCTGGGGCTCCATGCCCGAGCTTTATTTGCTGATCATCTTCAGCGCGGTGTTTGCGCCCAGC
GTGGCACTGCTGCTGTTTCTCCTCAGCCTGTTTGGCTGGATGGGATTGTCCGACTATGTGCGCGCCGAGTTTTTGCGCAA
CCGCCAGATGGACTATGTGCGCGCAGCCAGGGCCCTGGGCGTGAGCAATCTGCAGATCATGTGGCGGCACATCCTGCCCA
ACAGCATGACGCCTGTGGTGACGTTTTTGCCCTTTCGCATGAGCGCGGCGATCTTGGCGCTGACCTCGCTGGATTTCCTG
GGCCTGGGCGTGCCCCCGGGTACGCCCTCGTTGGGCGAGTTGCTCAACCAGGGCAAGGCGAACATCGATGCCTGGTGGAT
TTCGATGTCGACATTTGCCGTGCTGGTCGTCACGCTGTTGCTGCTGACCTTCATGGGCGACGCCTTGCGCGATGCCCTGG
ATCCCCGAAAGGCTGAGCTATGA

Upstream 100 bases:

>100_bases
CGGGACTACCCCGTGGTGCTGGGCACGCTCTATCTCTTCACGCTGATCGGCCTGGTGACCAAGCTGGTCAGCGATCTCTG
CTATGTCTGGGTAGACCCGC

Downstream 100 bases:

>100_bases
CCCCCACGCCTGTCACTGTGCATCCAGCGCTGCCGCCCGATGGGGGCTTCGCGACGGGTGGCGGATCTTCCGCGCCTGCC
CATCCGCTGCTGAAAGTCGA

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MLNLTDPPEAAVGRLPPEGAPLADGRSPIRGGLGENRSVVSLSPGRRAWKRFRRNKLGFYSLILFSTLVVLSLFAEVLSN
DTPLVAHYKGEYYFPLLKDYSEKTFDGDFETPTDYLDPFIREKLGQGGNWALYPPNPYGPRTINYFAKEPNPSAPSRDNL
LGTDDRGRDLLAQLIYGFRLSVLFGLALTVIGVVIGVITGAVQGYAGGKTDLAFQRFMEIWGSMPELYLLIIFSAVFAPS
VALLLFLLSLFGWMGLSDYVRAEFLRNRQMDYVRAARALGVSNLQIMWRHILPNSMTPVVTFLPFRMSAAILALTSLDFL
GLGVPPGTPSLGELLNQGKANIDAWWISMSTFAVLVVTLLLLTFMGDALRDALDPRKAEL

Sequences:

>Translated_380_residues
MLNLTDPPEAAVGRLPPEGAPLADGRSPIRGGLGENRSVVSLSPGRRAWKRFRRNKLGFYSLILFSTLVVLSLFAEVLSN
DTPLVAHYKGEYYFPLLKDYSEKTFDGDFETPTDYLDPFIREKLGQGGNWALYPPNPYGPRTINYFAKEPNPSAPSRDNL
LGTDDRGRDLLAQLIYGFRLSVLFGLALTVIGVVIGVITGAVQGYAGGKTDLAFQRFMEIWGSMPELYLLIIFSAVFAPS
VALLLFLLSLFGWMGLSDYVRAEFLRNRQMDYVRAARALGVSNLQIMWRHILPNSMTPVVTFLPFRMSAAILALTSLDFL
GLGVPPGTPSLGELLNQGKANIDAWWISMSTFAVLVVTLLLLTFMGDALRDALDPRKAEL
>Mature_380_residues
MLNLTDPPEAAVGRLPPEGAPLADGRSPIRGGLGENRSVVSLSPGRRAWKRFRRNKLGFYSLILFSTLVVLSLFAEVLSN
DTPLVAHYKGEYYFPLLKDYSEKTFDGDFETPTDYLDPFIREKLGQGGNWALYPPNPYGPRTINYFAKEPNPSAPSRDNL
LGTDDRGRDLLAQLIYGFRLSVLFGLALTVIGVVIGVITGAVQGYAGGKTDLAFQRFMEIWGSMPELYLLIIFSAVFAPS
VALLLFLLSLFGWMGLSDYVRAEFLRNRQMDYVRAARALGVSNLQIMWRHILPNSMTPVVTFLPFRMSAAILALTSLDFL
GLGVPPGTPSLGELLNQGKANIDAWWISMSTFAVLVVTLLLLTFMGDALRDALDPRKAEL

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4239

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788505, Length=338, Percent_Identity=52.0710059171598, Blast_Score=350, Evalue=1e-97,
Organism=Escherichia coli, GI1787054, Length=234, Percent_Identity=31.1965811965812, Blast_Score=131, Evalue=6e-32,
Organism=Escherichia coli, GI1789964, Length=253, Percent_Identity=36.3636363636364, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1787760, Length=240, Percent_Identity=30.8333333333333, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1787498, Length=228, Percent_Identity=35.0877192982456, Blast_Score=114, Evalue=8e-27,
Organism=Escherichia coli, GI1787549, Length=216, Percent_Identity=31.4814814814815, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI1789889, Length=243, Percent_Identity=25.5144032921811, Blast_Score=83, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 42022; Mature: 42022

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNLTDPPEAAVGRLPPEGAPLADGRSPIRGGLGENRSVVSLSPGRRAWKRFRRNKLGFY
CCCCCCCCHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCEEEECCCHHHHHHHHHCCCHHH
SLILFSTLVVLSLFAEVLSNDTPLVAHYKGEYYFPLLKDYSEKTFDGDFETPTDYLDPFI
HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEECHHHHHHCHHCCCCCCCCCHHHHHHHH
REKLGQGGNWALYPPNPYGPRTINYFAKEPNPSAPSRDNLLGTDDRGRDLLAQLIYGFRL
HHHCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
SVLFGLALTVIGVVIGVITGAVQGYAGGKTDLAFQRFMEIWGSMPELYLLIIFSAVFAPS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
VALLLFLLSLFGWMGLSDYVRAEFLRNRQMDYVRAARALGVSNLQIMWRHILPNSMTPVV
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHH
TFLPFRMSAAILALTSLDFLGLGVPPGTPSLGELLNQGKANIDAWWISMSTFAVLVVTLL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
LLTFMGDALRDALDPRKAEL
HHHHHHHHHHHHCCCHHCCC
>Mature Secondary Structure
MLNLTDPPEAAVGRLPPEGAPLADGRSPIRGGLGENRSVVSLSPGRRAWKRFRRNKLGFY
CCCCCCCCHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCEEEECCCHHHHHHHHHCCCHHH
SLILFSTLVVLSLFAEVLSNDTPLVAHYKGEYYFPLLKDYSEKTFDGDFETPTDYLDPFI
HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEECHHHHHHCHHCCCCCCCCCHHHHHHHH
REKLGQGGNWALYPPNPYGPRTINYFAKEPNPSAPSRDNLLGTDDRGRDLLAQLIYGFRL
HHHCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
SVLFGLALTVIGVVIGVITGAVQGYAGGKTDLAFQRFMEIWGSMPELYLLIIFSAVFAPS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
VALLLFLLSLFGWMGLSDYVRAEFLRNRQMDYVRAARALGVSNLQIMWRHILPNSMTPVV
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHH
TFLPFRMSAAILALTSLDFLGLGVPPGTPSLGELLNQGKANIDAWWISMSTFAVLVVTLL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
LLTFMGDALRDALDPRKAEL
HHHHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]