| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788279
Identifier: 91788279
GI number: 91788279
Start: 2512040
End: 2512468
Strand: Reverse
Name: 91788279
Synonym: Bpro_2414
Alternate gene names: NA
Gene position: 2512468-2512040 (Counterclockwise)
Preceding gene: 91788281
Following gene: 91788278
Centisome position: 48.31
GC content: 61.54
Gene sequence:
>429_bases ATGAGCGAATCGACCATCTGGTGGCTGCTGGCAGGTAGCGCGGTCGCGGTTGAGCTGGTCACCGGCACCTTTTACCTGCT GATGCTGGCCGTCGGGTTCGTCGCAGGCGCCATTGCCGCTCACTCGGGCCTTGCCATTATCGGCCAAATGGTAATCTCTG CTGCTGTAGGGGGTGGTGCGGTGGCCGCCTGGCACTGGTACCGCGGCAAGACCCCCGCCCCCTTGCCCGCAAATGCCAAT CGGGATGTCAACCTGGATATTGGTGAGCCGGTACAGGTCGCGCAATGGAACTCCGATGGAACCACCACCGTGAAATTTCG CGGCGCCCTCTGGACCGCCATACCTGCCGACCCGGCCGAACCTGCCGCCACCGGAAGTTTTCGCATCAAGGAAATGCAGG GCAATCGTCTGGTACTTGAAAAGCTGTGA
Upstream 100 bases:
>100_bases GACTGGCGAGTGCGAAGTGTAAGGAAATATTGTTGCTGTACGCTTGCGAGAGGGTCTAATTGCCCCAAAATGTAGCGCAT CACCGACAAAAGGAAGAAAC
Downstream 100 bases:
>100_bases GGCGCTCTCGTAGCCTTTTTGTGCCCTGCTGCCGATTCGCCGGCCTGGCGGGCACCCGGCACACCAATTTGAATCAATCT AAATCAACGGAGGAAGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MSESTIWWLLAGSAVAVELVTGTFYLLMLAVGFVAGAIAAHSGLAIIGQMVISAAVGGGAVAAWHWYRGKTPAPLPANAN RDVNLDIGEPVQVAQWNSDGTTTVKFRGALWTAIPADPAEPAATGSFRIKEMQGNRLVLEKL
Sequences:
>Translated_142_residues MSESTIWWLLAGSAVAVELVTGTFYLLMLAVGFVAGAIAAHSGLAIIGQMVISAAVGGGAVAAWHWYRGKTPAPLPANAN RDVNLDIGEPVQVAQWNSDGTTTVKFRGALWTAIPADPAEPAATGSFRIKEMQGNRLVLEKL >Mature_141_residues SESTIWWLLAGSAVAVELVTGTFYLLMLAVGFVAGAIAAHSGLAIIGQMVISAAVGGGAVAAWHWYRGKTPAPLPANANR DVNLDIGEPVQVAQWNSDGTTTVKFRGALWTAIPADPAEPAATGSFRIKEMQGNRLVLEKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14887; Mature: 14756
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESTIWWLLAGSAVAVELVTGTFYLLMLAVGFVAGAIAAHSGLAIIGQMVISAAVGGGA CCCCEEEEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCE VAAWHWYRGKTPAPLPANANRDVNLDIGEPVQVAQWNSDGTTTVKFRGALWTAIPADPAE EEEEEEECCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCEEEEECCEEEEECCCCCCC PAATGSFRIKEMQGNRLVLEKL CCCCCCEEEEEECCCEEEEECC >Mature Secondary Structure SESTIWWLLAGSAVAVELVTGTFYLLMLAVGFVAGAIAAHSGLAIIGQMVISAAVGGGA CCCEEEEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCE VAAWHWYRGKTPAPLPANANRDVNLDIGEPVQVAQWNSDGTTTVKFRGALWTAIPADPAE EEEEEEECCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCEEEEECCEEEEECCCCCCC PAATGSFRIKEMQGNRLVLEKL CCCCCCEEEEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA