| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788264
Identifier: 91788264
GI number: 91788264
Start: 2493836
End: 2495002
Strand: Direct
Name: 91788264
Synonym: Bpro_2398
Alternate gene names: NA
Gene position: 2493836-2495002 (Clockwise)
Preceding gene: 91788255
Following gene: 91788265
Centisome position: 47.96
GC content: 63.5
Gene sequence:
>1167_bases ATGCTGGCCGGTTCGGTCTTTGCCTTCACTCGTTCCCTACGCCGGATTTCGCTCAATGCGGCCTTGTCGGCGGTCGTGTC AGCACTTTTTGTGGTGGCCTTTCTGGGCGGACTCCCGATAGAAAATGCCGACACGCAGGCACGATTTCTGGCTCATGTTG CCAGCGTGGTGTCTGCGCTGCTGGCCTATCAGCTGTTTTCCTTCCTGAGCCTCCTGCGGCAGCCCGAGGTCCGGTGGCTC ACCATCAAGGCTTTGCTGGCGCTGGCGGCCACGGTCATAGTGATCGGCTGGTTGCTGGAGCCCCGGCAAGCGCTGGCCTT GAGCCTCACCATGGCTTGCCTGCTGGGGGTGACGGCGTTGATCCTCAGCATCCGCAGCGCGCTGCGCGGCGACCGGCTCG CCTGGGTGGCGGTGTCGGGCGTTACCTTCATGCTGCTGGCCATTGCCGGGCTCGGCTGGATTGCGCTGGACCGTGCCCAT GTGCCCTGGCAGGCCCATGCGGTGAGCGCTCTCGCCGGAACGGCTTACCTGGCCACAATGGCGTCGGTACTGTGGACGCG TTACTCCTACCTCATCGAACTCAACCAGGTGATGGCGCACGGGCCCAGCTATGACCCGGTCACGCGCATGCGCTCGCACA GCGAGACGGGCAACATGGTGGGTGCAGCCTTCAAACACTACCGCGACGAGCCCGTTCCGCTGGGCGTGATTGTGGTGTCC ATCGCCAACTTGTACGTACTTGAAAAACTCTACGGACTGGCGGCGATGAACCATGCGCTGTTTGTCTGTGCAGGCCGCTT GCGCCGCAGCGTGCCGGCCCATGTCGAGATGGGCAGGCTGGGCAAGGATGGGTTTTTGCTTTTGATGCGCAATTGCCATG ACAGCGGCCGGCTGATTCATCTGGCGCATATGGTTCAGGCGCGCTTGTCCCGGTCGGTGGTGCTCAATATCACCCTGGAC GCCGGCGTGCCGGGTCAGCAACAGACCGTTTGGGCCGCAGAGATCGGAGTGGGGGTGCAGCGGGTGTCCAAGACAGATGC GCGCGCAGCAACCGCGGTGGCCATGGGCCGGGGTATGTCGCGCACGGCCTGGAGCTACCCGAGCCGGATCGCCTGGTATG ACGAGAAAAGCGGGGAAATTGTCGACATGCCCATTCTCGCGGCCTGA
Upstream 100 bases:
>100_bases GCCGCCAGATTGCTTTATAGCCAAGGGACAGGTATCGTTCACGCCCATGGAACAATTCGCCATCGGGTTTTGGGGCTGCT ATTTCGGGGCGACAGGTTTG
Downstream 100 bases:
>100_bases CGGCGCGCCTCACGATTTGCTGACCGCCCTTGCTGCGCAACGGCGCATCCGAAAGGCGCTCACGCGCCGGCACTGGCAAG AACACCGATAATTGGCAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MLAGSVFAFTRSLRRISLNAALSAVVSALFVVAFLGGLPIENADTQARFLAHVASVVSALLAYQLFSFLSLLRQPEVRWL TIKALLALAATVIVIGWLLEPRQALALSLTMACLLGVTALILSIRSALRGDRLAWVAVSGVTFMLLAIAGLGWIALDRAH VPWQAHAVSALAGTAYLATMASVLWTRYSYLIELNQVMAHGPSYDPVTRMRSHSETGNMVGAAFKHYRDEPVPLGVIVVS IANLYVLEKLYGLAAMNHALFVCAGRLRRSVPAHVEMGRLGKDGFLLLMRNCHDSGRLIHLAHMVQARLSRSVVLNITLD AGVPGQQQTVWAAEIGVGVQRVSKTDARAATAVAMGRGMSRTAWSYPSRIAWYDEKSGEIVDMPILAA
Sequences:
>Translated_388_residues MLAGSVFAFTRSLRRISLNAALSAVVSALFVVAFLGGLPIENADTQARFLAHVASVVSALLAYQLFSFLSLLRQPEVRWL TIKALLALAATVIVIGWLLEPRQALALSLTMACLLGVTALILSIRSALRGDRLAWVAVSGVTFMLLAIAGLGWIALDRAH VPWQAHAVSALAGTAYLATMASVLWTRYSYLIELNQVMAHGPSYDPVTRMRSHSETGNMVGAAFKHYRDEPVPLGVIVVS IANLYVLEKLYGLAAMNHALFVCAGRLRRSVPAHVEMGRLGKDGFLLLMRNCHDSGRLIHLAHMVQARLSRSVVLNITLD AGVPGQQQTVWAAEIGVGVQRVSKTDARAATAVAMGRGMSRTAWSYPSRIAWYDEKSGEIVDMPILAA >Mature_388_residues MLAGSVFAFTRSLRRISLNAALSAVVSALFVVAFLGGLPIENADTQARFLAHVASVVSALLAYQLFSFLSLLRQPEVRWL TIKALLALAATVIVIGWLLEPRQALALSLTMACLLGVTALILSIRSALRGDRLAWVAVSGVTFMLLAIAGLGWIALDRAH VPWQAHAVSALAGTAYLATMASVLWTRYSYLIELNQVMAHGPSYDPVTRMRSHSETGNMVGAAFKHYRDEPVPLGVIVVS IANLYVLEKLYGLAAMNHALFVCAGRLRRSVPAHVEMGRLGKDGFLLLMRNCHDSGRLIHLAHMVQARLSRSVVLNITLD AGVPGQQQTVWAAEIGVGVQRVSKTDARAATAVAMGRGMSRTAWSYPSRIAWYDEKSGEIVDMPILAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41950; Mature: 41950
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAGSVFAFTRSLRRISLNAALSAVVSALFVVAFLGGLPIENADTQARFLAHVASVVSAL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH LAYQLFSFLSLLRQPEVRWLTIKALLALAATVIVIGWLLEPRQALALSLTMACLLGVTAL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH ILSIRSALRGDRLAWVAVSGVTFMLLAIAGLGWIALDRAHVPWQAHAVSALAGTAYLATM HHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCHHEECCCCCCHHHHHHHHHHHHHHHHHH ASVLWTRYSYLIELNQVMAHGPSYDPVTRMRSHSETGNMVGAAFKHYRDEPVPLGVIVVS HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHH IANLYVLEKLYGLAAMNHALFVCAGRLRRSVPAHVEMGRLGKDGFLLLMRNCHDSGRLIH HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCEEEEECCCCCCCCHH LAHMVQARLSRSVVLNITLDAGVPGQQQTVWAAEIGVGVQRVSKTDARAATAVAMGRGMS HHHHHHHHHCCEEEEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RTAWSYPSRIAWYDEKSGEIVDMPILAA CCCCCCCCCEEEEECCCCCEECCCCCCC >Mature Secondary Structure MLAGSVFAFTRSLRRISLNAALSAVVSALFVVAFLGGLPIENADTQARFLAHVASVVSAL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH LAYQLFSFLSLLRQPEVRWLTIKALLALAATVIVIGWLLEPRQALALSLTMACLLGVTAL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH ILSIRSALRGDRLAWVAVSGVTFMLLAIAGLGWIALDRAHVPWQAHAVSALAGTAYLATM HHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCHHEECCCCCCHHHHHHHHHHHHHHHHHH ASVLWTRYSYLIELNQVMAHGPSYDPVTRMRSHSETGNMVGAAFKHYRDEPVPLGVIVVS HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHH IANLYVLEKLYGLAAMNHALFVCAGRLRRSVPAHVEMGRLGKDGFLLLMRNCHDSGRLIH HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCEEEEECCCCCCCCHH LAHMVQARLSRSVVLNITLDAGVPGQQQTVWAAEIGVGVQRVSKTDARAATAVAMGRGMS HHHHHHHHHCCEEEEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RTAWSYPSRIAWYDEKSGEIVDMPILAA CCCCCCCCCEEEEECCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA