| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is metI [H]
Identifier: 91788235
GI number: 91788235
Start: 2461658
End: 2462323
Strand: Direct
Name: metI [H]
Synonym: Bpro_2368
Alternate gene names: 91788235
Gene position: 2461658-2462323 (Clockwise)
Preceding gene: 91788234
Following gene: 91788236
Centisome position: 47.34
GC content: 63.66
Gene sequence:
>666_bases ATGTTCAGTAATTTTTCGCAGGCCCTGCTGGAGCTGTTTGTCAGCTCGCTGTGGGAAACAATCATCATGGTCGGCATTTC AGGCCTGGTGGGTGCGTTGATCGGCGTTCCGCTGGGCGTTTTCCTGCGGCTGACGGACGAGGGCGGCGTGCTGCAGAACG CGGGCGTGAACCGCGTGGTCGGTGGCATCGTGAACGCCGTGCGCTCCACGCCTTTCATCATCCTGCTGGTGGCCATCATT CCGCTGACGCGCCTTTTCACGGGTTCCTCCATCGGTACGGCGGCAGCCGTGGTGCCGCTCACGATTGCGGCGGCTCCGTT TATTGCGCGGCTGGTGGAAACCTCGCTGCGCGAGGTCGATCACGGCCTGATTGAAGCGGCGCTGGCCATGGGCGCGACCA CGCGGCAAATCGTGCTCAAGGTGCTGCTGCCCGAAGCGCTGCCCGGCATTGTCGCGGGCCTGACGATCACCTTTGTGAGT TTGACCGGCTACTCAGCTATGGCCGGCGCCATCGGCGGCGGCGGGCTGGGCGACCTGGGTATTCGTTACGGCTACCAGCG CTTCTTGCCGGAGGTGATGCTGGCGGTGGTGCTGGTGCTGATCCTGTTTGTGCAGGCGGTGCAAAGCCTGGGTGACTGGG CCGTGCGCAGGTTGAGCCACAAATGA
Upstream 100 bases:
>100_bases GAGCAGCTCAATGCAGCCGTGGCGCATTTGCGCGGCGCCGGCGTGCATGTGGATCAGGTCGATGGAGCGTTGCCAGGCGG GTTGGCGGGAGGTTTCAGCC
Downstream 100 bases:
>100_bases ATCTGGTCTTGAATTGGTTTTTCTCCCACTCCCTCTGGGAGACGGCAGGGGTGAGGGCCGGCGGCGGTCGATCTGCTGCC ACTGGTGCCAAAGCCGCGAG
Product: binding-protein-dependent transport systems inner membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MFSNFSQALLELFVSSLWETIIMVGISGLVGALIGVPLGVFLRLTDEGGVLQNAGVNRVVGGIVNAVRSTPFIILLVAII PLTRLFTGSSIGTAAAVVPLTIAAAPFIARLVETSLREVDHGLIEAALAMGATTRQIVLKVLLPEALPGIVAGLTITFVS LTGYSAMAGAIGGGGLGDLGIRYGYQRFLPEVMLAVVLVLILFVQAVQSLGDWAVRRLSHK
Sequences:
>Translated_221_residues MFSNFSQALLELFVSSLWETIIMVGISGLVGALIGVPLGVFLRLTDEGGVLQNAGVNRVVGGIVNAVRSTPFIILLVAII PLTRLFTGSSIGTAAAVVPLTIAAAPFIARLVETSLREVDHGLIEAALAMGATTRQIVLKVLLPEALPGIVAGLTITFVS LTGYSAMAGAIGGGGLGDLGIRYGYQRFLPEVMLAVVLVLILFVQAVQSLGDWAVRRLSHK >Mature_221_residues MFSNFSQALLELFVSSLWETIIMVGISGLVGALIGVPLGVFLRLTDEGGVLQNAGVNRVVGGIVNAVRSTPFIILLVAII PLTRLFTGSSIGTAAAVVPLTIAAAPFIARLVETSLREVDHGLIEAALAMGATTRQIVLKVLLPEALPGIVAGLTITFVS LTGYSAMAGAIGGGGLGDLGIRYGYQRFLPEVMLAVVLVLILFVQAVQSLGDWAVRRLSHK
Specific function: Part of the binding-protein-dependent transport system for D-methionine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG2011
COG function: function code P; ABC-type metal ion transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786397, Length=216, Percent_Identity=52.7777777777778, Blast_Score=181, Evalue=3e-47, Organism=Escherichia coli, GI1789033, Length=150, Percent_Identity=33.3333333333333, Blast_Score=65, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 23062; Mature: 23062
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSNFSQALLELFVSSLWETIIMVGISGLVGALIGVPLGVFLRLTDEGGVLQNAGVNRVV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHH GGIVNAVRSTPFIILLVAIIPLTRLFTGSSIGTAAAVVPLTIAAAPFIARLVETSLREVD HHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HGLIEAALAMGATTRQIVLKVLLPEALPGIVAGLTITFVSLTGYSAMAGAIGGGGLGDLG HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH IRYGYQRFLPEVMLAVVLVLILFVQAVQSLGDWAVRRLSHK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFSNFSQALLELFVSSLWETIIMVGISGLVGALIGVPLGVFLRLTDEGGVLQNAGVNRVV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHH GGIVNAVRSTPFIILLVAIIPLTRLFTGSSIGTAAAVVPLTIAAAPFIARLVETSLREVD HHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HGLIEAALAMGATTRQIVLKVLLPEALPGIVAGLTITFVSLTGYSAMAGAIGGGGLGDLG HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH IRYGYQRFLPEVMLAVVLVLILFVQAVQSLGDWAVRRLSHK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]