| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788207
Identifier: 91788207
GI number: 91788207
Start: 2435696
End: 2436103
Strand: Reverse
Name: 91788207
Synonym: Bpro_2338
Alternate gene names: NA
Gene position: 2436103-2435696 (Counterclockwise)
Preceding gene: 91788208
Following gene: 91788206
Centisome position: 46.85
GC content: 62.5
Gene sequence:
>408_bases ATGAAACTAATAGCTGCTAGCGAGCCCTCCACTGGGGCTACAGGCCAAAATGTCATTGAACTGGCAAACGACGCCGATCC GTTCCAGGTTTCGCTCGAGGGCGTGGACCGCATTGACCTGAACTTCCCCAAATTCACCGATGGCCGGGCCTTCAGCCAGG CCTTCCTGCTGCGTCGCCGGCTCGGTTTCCAGGGTGAAATCCGCGCCACCGGCGATGTGCTGGTCGACCAGCTGGCGCAA ATGGAGCGCAGCGGCTTTGACGTGGCCGTGCTGCGCGCCGACCAGGACATGGGGATCGCCCAGCGCGTGCTGGCTGCCTA CCCCGGCTACGGCGTGGGCAAGTACCAGGGCGATGCAATCGACATCCAGCCGCATTTTGTGACCGCGGCAACATCCTCTG CAACCTGA
Upstream 100 bases:
>100_bases CTGCTGCGAATGGTGCGCGTTTTAGCGCCGCCCGCGCCGAGACGGCTGAAACGGCCGCCTGAAGCGCCACCCTGCTGCAC CTTCCAAGGACAAAATTACC
Downstream 100 bases:
>100_bases AAGTCGGACCATGGGTGCCATTTCCCTTTACGCCAAGGCGTCGCCAGACTTTGCCGAAAAACTCGCGCACAGCCTGGCCT TGCTGAAATCCTCCGCCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MKLIAASEPSTGATGQNVIELANDADPFQVSLEGVDRIDLNFPKFTDGRAFSQAFLLRRRLGFQGEIRATGDVLVDQLAQ MERSGFDVAVLRADQDMGIAQRVLAAYPGYGVGKYQGDAIDIQPHFVTAATSSAT
Sequences:
>Translated_135_residues MKLIAASEPSTGATGQNVIELANDADPFQVSLEGVDRIDLNFPKFTDGRAFSQAFLLRRRLGFQGEIRATGDVLVDQLAQ MERSGFDVAVLRADQDMGIAQRVLAAYPGYGVGKYQGDAIDIQPHFVTAATSSAT >Mature_135_residues MKLIAASEPSTGATGQNVIELANDADPFQVSLEGVDRIDLNFPKFTDGRAFSQAFLLRRRLGFQGEIRATGDVLVDQLAQ MERSGFDVAVLRADQDMGIAQRVLAAYPGYGVGKYQGDAIDIQPHFVTAATSSAT
Specific function: Unknown
COG id: COG3749
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14508; Mature: 14508
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLIAASEPSTGATGQNVIELANDADPFQVSLEGVDRIDLNFPKFTDGRAFSQAFLLRRR CCEEECCCCCCCCCCCHHEEECCCCCCEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHH LGFQGEIRATGDVLVDQLAQMERSGFDVAVLRADQDMGIAQRVLAAYPGYGVGKYQGDAI CCCCCCEEEHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCEE DIQPHFVTAATSSAT ECCCCEEEECCCCCC >Mature Secondary Structure MKLIAASEPSTGATGQNVIELANDADPFQVSLEGVDRIDLNFPKFTDGRAFSQAFLLRRR CCEEECCCCCCCCCCCHHEEECCCCCCEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHH LGFQGEIRATGDVLVDQLAQMERSGFDVAVLRADQDMGIAQRVLAAYPGYGVGKYQGDAI CCCCCCEEEHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCEE DIQPHFVTAATSSAT ECCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA