| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788174
Identifier: 91788174
GI number: 91788174
Start: 2400370
End: 2401161
Strand: Reverse
Name: 91788174
Synonym: Bpro_2305
Alternate gene names: NA
Gene position: 2401161-2400370 (Counterclockwise)
Preceding gene: 91788176
Following gene: 91788172
Centisome position: 46.17
GC content: 67.42
Gene sequence:
>792_bases ATGCCAGAAAACAAGTCCACCGGCGGAGCCATCGCCACCACCACCCTGGAAGCATCGTTCCCTGCGCCGCTCGGTCGCGC GCATGCCCGGCGCCTGCGCGAGATCTACCGCTCTGCCGGTTGGCCCTGCCAGGATGTGCTGGAAATTGAATTGCTGGCCG CCGGCCTGCTGCAGCGCATAGCCGGCCCGGCGGGCCATGAAACCCTGCGCGTCACCGATACGGGCGTGGCCTATCTCGCC GTCACACTGGTGCGCAACCGTGCGGCTTTGTCGAAACACGAAGCCCTGGTGGAACACGTGGCCTGCGAGATGGTGCGCGC GGGCCGCATCACCTGGCGTGGCCTGGGCCTGCGCGCGCAACTGCCACCTGCGGAGGAAGGCGGGCCCGCGCGCTGGTGCA TGGCACGCCCCGATGTGTTCTCGATCCGCAATACCTCGGTGCAGGAGTATGTGGACCCCATCGTTCACGAGATCAAGGTC CATCGCGCCGACCTGCTGGGTGACCTTCGCCGCCCCGAAAAGCGCGCAGCCTATCTGGACCTGGGTGGGGAATGCTGGTA CGTGCTGGGCTGCGACGCCAAAGGCCGGCCCATTGGCACTGCCGATGAGATCCCGCTGGAGTGCGGCGTCATGGTGATGG AGGCCAACCGCCTGACCGTCGCTCGCGCAGCGCCCCGGCGCTCCCGCCAGCCCCTGCCGGTCGGCGTATGGATGGCGTTG GCCAAGGCTGCGCCTGTGACCGGGCTGATCGATGACGAGCAGGGGTTGCTCGCGGATGCTGAGCAAAATTGA
Upstream 100 bases:
>100_bases ACGTGATTTCATTGGCGCCGCGAGCCTGCCCATTGCCTTGCGTCCTGGCCACACCGTGCAAACACACTGGCGGCGAGGCA AAATTGACACCTCCCCTGCC
Downstream 100 bases:
>100_bases GACCGGCATCGTTGCTGTCGGCGATCTGATCGCTGGACAACACGCAAGGAGCCCGCGCCAATAAAAAAACCCCGCGATTG CGGGGTTTTTGATGATGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MPENKSTGGAIATTTLEASFPAPLGRAHARRLREIYRSAGWPCQDVLEIELLAAGLLQRIAGPAGHETLRVTDTGVAYLA VTLVRNRAALSKHEALVEHVACEMVRAGRITWRGLGLRAQLPPAEEGGPARWCMARPDVFSIRNTSVQEYVDPIVHEIKV HRADLLGDLRRPEKRAAYLDLGGECWYVLGCDAKGRPIGTADEIPLECGVMVMEANRLTVARAAPRRSRQPLPVGVWMAL AKAAPVTGLIDDEQGLLADAEQN
Sequences:
>Translated_263_residues MPENKSTGGAIATTTLEASFPAPLGRAHARRLREIYRSAGWPCQDVLEIELLAAGLLQRIAGPAGHETLRVTDTGVAYLA VTLVRNRAALSKHEALVEHVACEMVRAGRITWRGLGLRAQLPPAEEGGPARWCMARPDVFSIRNTSVQEYVDPIVHEIKV HRADLLGDLRRPEKRAAYLDLGGECWYVLGCDAKGRPIGTADEIPLECGVMVMEANRLTVARAAPRRSRQPLPVGVWMAL AKAAPVTGLIDDEQGLLADAEQN >Mature_262_residues PENKSTGGAIATTTLEASFPAPLGRAHARRLREIYRSAGWPCQDVLEIELLAAGLLQRIAGPAGHETLRVTDTGVAYLAV TLVRNRAALSKHEALVEHVACEMVRAGRITWRGLGLRAQLPPAEEGGPARWCMARPDVFSIRNTSVQEYVDPIVHEIKVH RADLLGDLRRPEKRAAYLDLGGECWYVLGCDAKGRPIGTADEIPLECGVMVMEANRLTVARAAPRRSRQPLPVGVWMALA KAAPVTGLIDDEQGLLADAEQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28575; Mature: 28444
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPENKSTGGAIATTTLEASFPAPLGRAHARRLREIYRSAGWPCQDVLEIELLAAGLLQRI CCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH AGPAGHETLRVTDTGVAYLAVTLVRNRAALSKHEALVEHVACEMVRAGRITWRGLGLRAQ CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEEC LPPAEEGGPARWCMARPDVFSIRNTSVQEYVDPIVHEIKVHRADLLGDLRRPEKRAAYLD CCCCCCCCCCEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEE LGGECWYVLGCDAKGRPIGTADEIPLECGVMVMEANRLTVARAAPRRSRQPLPVGVWMAL CCCCEEEEEECCCCCCCCCCCCCCCHHCCEEEEECCCEEEEECCCCCCCCCCCHHHHHHH AKAAPVTGLIDDEQGLLADAEQN HHCCCCCEEEECCCCCCCCCCCC >Mature Secondary Structure PENKSTGGAIATTTLEASFPAPLGRAHARRLREIYRSAGWPCQDVLEIELLAAGLLQRI CCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH AGPAGHETLRVTDTGVAYLAVTLVRNRAALSKHEALVEHVACEMVRAGRITWRGLGLRAQ CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEEC LPPAEEGGPARWCMARPDVFSIRNTSVQEYVDPIVHEIKVHRADLLGDLRRPEKRAAYLD CCCCCCCCCCEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEE LGGECWYVLGCDAKGRPIGTADEIPLECGVMVMEANRLTVARAAPRRSRQPLPVGVWMAL CCCCEEEEEECCCCCCCCCCCCCCCHHCCEEEEECCCEEEEECCCCCCCCCCCHHHHHHH AKAAPVTGLIDDEQGLLADAEQN HHCCCCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA