| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788090
Identifier: 91788090
GI number: 91788090
Start: 2311890
End: 2313245
Strand: Reverse
Name: 91788090
Synonym: Bpro_2217
Alternate gene names: NA
Gene position: 2313245-2311890 (Counterclockwise)
Preceding gene: 91788091
Following gene: 91788089
Centisome position: 44.48
GC content: 67.92
Gene sequence:
>1356_bases ATGAACCTCGCAGAGGCATTGAACCTGGGGTGCCTGTGCCGCACCCTGAACCCGGACCAGCTGCGCGAGCAGCTCGAGAC CGACCCCAGCCTGGAAGGCATGGTGGCCGGGCTGGCCACCACGCATCCCCACCTGTTCTCCGAAACCGCCGTCTTTCTGG ACCCCGCGATCCGCACGACGCTGGGCCAGGCCATCGCCGCCATCGAGCGCGTGATCGCCCTGCCCGCCTACCAGCAACTG GCCCTGGCCTGCGCCCCCGAGATTGCCCGCCATGATTTCGGGCCCGCAGGCGTGTTCATGGGCTATGACTTTCACCTCGG CGTCGACGGCCCACGCCTGATTGAAATCAACACCAACGCTGGTGGCGCCCTGCTGAACGCAGCGCTGGCGCGCGCGCACC GGGCCTGCTGCGAACCCATGCAGGGCCTGATGGATGCGTCAACCGATCTGACGCGGGTCAACCAGAGCTTTGTGGACATG TTCCGCGCCGAGTGGCAAGCCCAGCGCGGAGCACGGCCGCTGCGCACCATCCTGATCATCGATGACGCGCCGCACGCCCA GTACCTCGCGCCCGAGTTTGCGCTGGCACGGCAGTTGTTCCTCGCCCATGGCCTCGTTGCCGCCGTGGGAGATGCGCGCG AATTGCAGTGGAAGGACGACGCCCTGTGGCACCCGGCCCTTCCTGCAGGCCAGCCGGTGGATCTGGTCTACAACCGCCTG ACCGACTTCAGCCTGTCCGACCCGACCCATGCGGCCCTGCACGACGCTTATGTGGCGGGTGCAGCGGTCGTCACGCCGCA TCCGCGTGCCCATGCGCTGTATGCGGACAAACGCAACCTCATCACACTCGGCAACGACGCACTGCTTGCGTCGTGGGGGG TGTCCGATGAGGACCGCCGGATTCTGCAGGCCGCCATTCCGCACACCGAACTGGTCACCGCCGACCATGCCCAAGCACTC TGGGCCCGACGGCGCCAGCTGTTCTTCAAACCCGTGGCGGGCTATGGCGCAAAAGCCGCCTACCGCGGCGACAAGCTCAC GCGCGGCGTCTGGGGCGATATCCTGGCCGGCGGCTTTGTGGCCCAGGCGCTGGTGCCGCCCAGCGAGCGCCTGGTGGACG TCGATGGTGTGGCCACCCGCCTGAAGCTGGACCTGCGCGCCTACACCTGGCGCGGCCAGGTGCAATTGCTGGCGGCGCGC ACCTACACCGGCCAGACCACCAACTTCCGAACGGCCGGCGGCGGTTTTTCCCCGGTGGTGGTGTTATCCGCCCTGGACAG CCGCCTGCCCCCACCCCGATCAACCATGCCCGCAAGCGACAGCGCATGCGTTGCTGCCCCAGGCACGGTCTGCTGA
Upstream 100 bases:
>100_bases CTGACTTACCTGACCGAGCATTGCTGCCAAGGCGAGGCCTGTGAGGTAACCAACACCGCATCCTGCGGGGCCTGCTGACT CACAACGCCCAGGAGCTCTC
Downstream 100 bases:
>100_bases AAAAAACATAAACCGCTGGAGAATTCTCATGCCCGAGCACCCCCTCAACGTCCTGTTCTTATGCACCCACAATTCGGCCC GCAGCATTCTGGCCGAAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MNLAEALNLGCLCRTLNPDQLREQLETDPSLEGMVAGLATTHPHLFSETAVFLDPAIRTTLGQAIAAIERVIALPAYQQL ALACAPEIARHDFGPAGVFMGYDFHLGVDGPRLIEINTNAGGALLNAALARAHRACCEPMQGLMDASTDLTRVNQSFVDM FRAEWQAQRGARPLRTILIIDDAPHAQYLAPEFALARQLFLAHGLVAAVGDARELQWKDDALWHPALPAGQPVDLVYNRL TDFSLSDPTHAALHDAYVAGAAVVTPHPRAHALYADKRNLITLGNDALLASWGVSDEDRRILQAAIPHTELVTADHAQAL WARRRQLFFKPVAGYGAKAAYRGDKLTRGVWGDILAGGFVAQALVPPSERLVDVDGVATRLKLDLRAYTWRGQVQLLAAR TYTGQTTNFRTAGGGFSPVVVLSALDSRLPPPRSTMPASDSACVAAPGTVC
Sequences:
>Translated_451_residues MNLAEALNLGCLCRTLNPDQLREQLETDPSLEGMVAGLATTHPHLFSETAVFLDPAIRTTLGQAIAAIERVIALPAYQQL ALACAPEIARHDFGPAGVFMGYDFHLGVDGPRLIEINTNAGGALLNAALARAHRACCEPMQGLMDASTDLTRVNQSFVDM FRAEWQAQRGARPLRTILIIDDAPHAQYLAPEFALARQLFLAHGLVAAVGDARELQWKDDALWHPALPAGQPVDLVYNRL TDFSLSDPTHAALHDAYVAGAAVVTPHPRAHALYADKRNLITLGNDALLASWGVSDEDRRILQAAIPHTELVTADHAQAL WARRRQLFFKPVAGYGAKAAYRGDKLTRGVWGDILAGGFVAQALVPPSERLVDVDGVATRLKLDLRAYTWRGQVQLLAAR TYTGQTTNFRTAGGGFSPVVVLSALDSRLPPPRSTMPASDSACVAAPGTVC >Mature_451_residues MNLAEALNLGCLCRTLNPDQLREQLETDPSLEGMVAGLATTHPHLFSETAVFLDPAIRTTLGQAIAAIERVIALPAYQQL ALACAPEIARHDFGPAGVFMGYDFHLGVDGPRLIEINTNAGGALLNAALARAHRACCEPMQGLMDASTDLTRVNQSFVDM FRAEWQAQRGARPLRTILIIDDAPHAQYLAPEFALARQLFLAHGLVAAVGDARELQWKDDALWHPALPAGQPVDLVYNRL TDFSLSDPTHAALHDAYVAGAAVVTPHPRAHALYADKRNLITLGNDALLASWGVSDEDRRILQAAIPHTELVTADHAQAL WARRRQLFFKPVAGYGAKAAYRGDKLTRGVWGDILAGGFVAQALVPPSERLVDVDGVATRLKLDLRAYTWRGQVQLLAAR TYTGQTTNFRTAGGGFSPVVVLSALDSRLPPPRSTMPASDSACVAAPGTVC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48588; Mature: 48588
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLAEALNLGCLCRTLNPDQLREQLETDPSLEGMVAGLATTHPHLFSETAVFLDPAIRTT CCHHHHHCCCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHCCHHHCCHHHHHH LGQAIAAIERVIALPAYQQLALACAPEIARHDFGPAGVFMGYDFHLGVDGPRLIEINTNA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEEECCC GGALLNAALARAHRACCEPMQGLMDASTDLTRVNQSFVDMFRAEWQAQRGARPLRTILII CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE DDAPHAQYLAPEFALARQLFLAHGLVAAVGDARELQWKDDALWHPALPAGQPVDLVYNRL ECCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHH TDFSLSDPTHAALHDAYVAGAAVVTPHPRAHALYADKRNLITLGNDALLASWGVSDEDRR CCCCCCCCCHHHHHHHHHHCEEEECCCCCCEEEEECCCCEEEECCCEEEEECCCCHHHHH ILQAAIPHTELVTADHAQALWARRRQLFFKPVAGYGAKAAYRGDKLTRGVWGDILAGGFV HHHHHCCCHHEECCHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCHHCCHHHHHHHHHHH AQALVPPSERLVDVDGVATRLKLDLRAYTWRGQVQLLAARTYTGQTTNFRTAGGGFSPVV HHHCCCCHHHEEECCCCEEEEEEEEEEEEECCCEEEEEEEEECCCCCCEEECCCCCCHHH VLSALDSRLPPPRSTMPASDSACVAAPGTVC HHHHHHHCCCCCCCCCCCCCCCEECCCCCCC >Mature Secondary Structure MNLAEALNLGCLCRTLNPDQLREQLETDPSLEGMVAGLATTHPHLFSETAVFLDPAIRTT CCHHHHHCCCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHCCHHHCCHHHHHH LGQAIAAIERVIALPAYQQLALACAPEIARHDFGPAGVFMGYDFHLGVDGPRLIEINTNA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEEECCC GGALLNAALARAHRACCEPMQGLMDASTDLTRVNQSFVDMFRAEWQAQRGARPLRTILII CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE DDAPHAQYLAPEFALARQLFLAHGLVAAVGDARELQWKDDALWHPALPAGQPVDLVYNRL ECCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHH TDFSLSDPTHAALHDAYVAGAAVVTPHPRAHALYADKRNLITLGNDALLASWGVSDEDRR CCCCCCCCCHHHHHHHHHHCEEEECCCCCCEEEEECCCCEEEECCCEEEEECCCCHHHHH ILQAAIPHTELVTADHAQALWARRRQLFFKPVAGYGAKAAYRGDKLTRGVWGDILAGGFV HHHHHCCCHHEECCHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCHHCCHHHHHHHHHHH AQALVPPSERLVDVDGVATRLKLDLRAYTWRGQVQLLAARTYTGQTTNFRTAGGGFSPVV HHHCCCCHHHEEECCCCEEEEEEEEEEEEECCCEEEEEEEEECCCCCCEEECCCCCCHHH VLSALDSRLPPPRSTMPASDSACVAAPGTVC HHHHHHHCCCCCCCCCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA