| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788088
Identifier: 91788088
GI number: 91788088
Start: 2310618
End: 2311364
Strand: Reverse
Name: 91788088
Synonym: Bpro_2215
Alternate gene names: NA
Gene position: 2311364-2310618 (Counterclockwise)
Preceding gene: 91788089
Following gene: 91788084
Centisome position: 44.45
GC content: 65.6
Gene sequence:
>747_bases ATGAGCCAGCTGTCGACCAGCCCGGACCGTCAAGCGCATTCCCAGGCCGCCCCGCCACGTTTAAAGCACCAGCTGCTGGC CGAGTTTTTCGGTACCGCCGCCTTGCTGTGCGCCGTGATCGGCTCCGGCATCATGGCCGAGCGCCTGAGCGGCGGCAACA CCGCCATAGCCCTGCTGGCCAACACGCTGGCCACCGTGTTTGCCCTCTACGTGCTGATTGAAGTGTTGGGCCCCGTAAGC GGCGCCCACTTCAACCCGCTGGTAACCCTCGTTTTATGGTCAAGAAGCACCCCAACCCATGGCGGACGGACGCCAACCGC CCTCTTTCTTATAGCGGGTCAATTGCTGGGTGCGGTGTCAGGCGCCTGGCTGGCCCATGCCATGTTCGACATGAGCGTGC TGCAGTTCAGCAGCAAGCTGCGCAGCGGCTGGGGTCAATGGCTGGCCGAAGGCGTGGCCACTGCCGGGCTGATTCTGGTG GTGCTGCGCGCGCCCAAAGGCAAGGCAGCGGCGCTGGTGGCCTGCTACATCGGCGCGGCTTACTGGTTCACGGCGAGTAC TTCGTTCGCCAATCCGGCCGCTGTGCTCGGGCGCATGCTGTCAGACAGCTTTGCTGGCATTGCGCCCATCAGTGCGCCAG GTTTTGCGGTGGCTGAGGCCGCCGGGGCGGTGGCAGGTGTGCTGCTCAGTCGATGGCTGGGTGCCACCGGCGCGCAACCC CACGCGGACGGAGTGCAGCACCCTTGA
Upstream 100 bases:
>100_bases TGCATGCGATCCACCGCCGTCTGGAACTGCTGGTCAATCTGCCGCCAGCCAGCCTTGGCAAATTGATGCTGCAAAACAGC GCACGTAATTTGGCGGATTC
Downstream 100 bases:
>100_bases TCAATCCTCAGGTATGCCGATGGCCTCAGGTGGCCATCATTCCAGCCACTTCTGGAAAAACTGCGCCTGCCCCATGGCCG GGTCCAGCTGGTAGCCGGCA
Product: major intrinsic protein
Products: NA
Alternate protein names: Phosphotyrosine Protein Phosphatase; MIP Family Protein; MIP Family Channel Protein; Low Molecular Weight Phosphotyrosine Protein Phosphatase; Transport Transmembrane Protein; Glycerol Uptake Transporter Protein MIP Family; Aquaglyceroporin Intrinsic Protein Family; Arsenate Reductase; Glycerol Uptake Facilitator Or Related Permease; Transmembrane ABC Transporter Protein; Transmembrane Abc Transporter Protein Intrinsic Protein; Integral Membrane Protein; Transmembrane ABC Transporter Protein Intrinsic Protein; Aquaporin/Glycerol Uptake Facilitator Protein; MIP Family Permease; Mip Family Channel Protein; Channel Transporter; Transmembrane Aquaporin
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MSQLSTSPDRQAHSQAAPPRLKHQLLAEFFGTAALLCAVIGSGIMAERLSGGNTAIALLANTLATVFALYVLIEVLGPVS GAHFNPLVTLVLWSRSTPTHGGRTPTALFLIAGQLLGAVSGAWLAHAMFDMSVLQFSSKLRSGWGQWLAEGVATAGLILV VLRAPKGKAAALVACYIGAAYWFTASTSFANPAAVLGRMLSDSFAGIAPISAPGFAVAEAAGAVAGVLLSRWLGATGAQP HADGVQHP
Sequences:
>Translated_248_residues MSQLSTSPDRQAHSQAAPPRLKHQLLAEFFGTAALLCAVIGSGIMAERLSGGNTAIALLANTLATVFALYVLIEVLGPVS GAHFNPLVTLVLWSRSTPTHGGRTPTALFLIAGQLLGAVSGAWLAHAMFDMSVLQFSSKLRSGWGQWLAEGVATAGLILV VLRAPKGKAAALVACYIGAAYWFTASTSFANPAAVLGRMLSDSFAGIAPISAPGFAVAEAAGAVAGVLLSRWLGATGAQP HADGVQHP >Mature_247_residues SQLSTSPDRQAHSQAAPPRLKHQLLAEFFGTAALLCAVIGSGIMAERLSGGNTAIALLANTLATVFALYVLIEVLGPVSG AHFNPLVTLVLWSRSTPTHGGRTPTALFLIAGQLLGAVSGAWLAHAMFDMSVLQFSSKLRSGWGQWLAEGVATAGLILVV LRAPKGKAAALVACYIGAAYWFTASTSFANPAAVLGRMLSDSFAGIAPISAPGFAVAEAAGAVAGVLLSRWLGATGAQPH ADGVQHP
Specific function: Unknown
COG id: COG0580
COG function: function code G; Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25410; Mature: 25279
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQLSTSPDRQAHSQAAPPRLKHQLLAEFFGTAALLCAVIGSGIMAERLSGGNTAIALLA CCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHH NTLATVFALYVLIEVLGPVSGAHFNPLVTLVLWSRSTPTHGGRTPTALFLIAGQLLGAVS HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHH GAWLAHAMFDMSVLQFSSKLRSGWGQWLAEGVATAGLILVVLRAPKGKAAALVACYIGAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHH YWFTASTSFANPAAVLGRMLSDSFAGIAPISAPGFAVAEAAGAVAGVLLSRWLGATGAQP HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC HADGVQHP CCCCCCCC >Mature Secondary Structure SQLSTSPDRQAHSQAAPPRLKHQLLAEFFGTAALLCAVIGSGIMAERLSGGNTAIALLA CCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHH NTLATVFALYVLIEVLGPVSGAHFNPLVTLVLWSRSTPTHGGRTPTALFLIAGQLLGAVS HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHH GAWLAHAMFDMSVLQFSSKLRSGWGQWLAEGVATAGLILVVLRAPKGKAAALVACYIGAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHH YWFTASTSFANPAAVLGRMLSDSFAGIAPISAPGFAVAEAAGAVAGVLLSRWLGATGAQP HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC HADGVQHP CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA