Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788088

Identifier: 91788088

GI number: 91788088

Start: 2310618

End: 2311364

Strand: Reverse

Name: 91788088

Synonym: Bpro_2215

Alternate gene names: NA

Gene position: 2311364-2310618 (Counterclockwise)

Preceding gene: 91788089

Following gene: 91788084

Centisome position: 44.45

GC content: 65.6

Gene sequence:

>747_bases
ATGAGCCAGCTGTCGACCAGCCCGGACCGTCAAGCGCATTCCCAGGCCGCCCCGCCACGTTTAAAGCACCAGCTGCTGGC
CGAGTTTTTCGGTACCGCCGCCTTGCTGTGCGCCGTGATCGGCTCCGGCATCATGGCCGAGCGCCTGAGCGGCGGCAACA
CCGCCATAGCCCTGCTGGCCAACACGCTGGCCACCGTGTTTGCCCTCTACGTGCTGATTGAAGTGTTGGGCCCCGTAAGC
GGCGCCCACTTCAACCCGCTGGTAACCCTCGTTTTATGGTCAAGAAGCACCCCAACCCATGGCGGACGGACGCCAACCGC
CCTCTTTCTTATAGCGGGTCAATTGCTGGGTGCGGTGTCAGGCGCCTGGCTGGCCCATGCCATGTTCGACATGAGCGTGC
TGCAGTTCAGCAGCAAGCTGCGCAGCGGCTGGGGTCAATGGCTGGCCGAAGGCGTGGCCACTGCCGGGCTGATTCTGGTG
GTGCTGCGCGCGCCCAAAGGCAAGGCAGCGGCGCTGGTGGCCTGCTACATCGGCGCGGCTTACTGGTTCACGGCGAGTAC
TTCGTTCGCCAATCCGGCCGCTGTGCTCGGGCGCATGCTGTCAGACAGCTTTGCTGGCATTGCGCCCATCAGTGCGCCAG
GTTTTGCGGTGGCTGAGGCCGCCGGGGCGGTGGCAGGTGTGCTGCTCAGTCGATGGCTGGGTGCCACCGGCGCGCAACCC
CACGCGGACGGAGTGCAGCACCCTTGA

Upstream 100 bases:

>100_bases
TGCATGCGATCCACCGCCGTCTGGAACTGCTGGTCAATCTGCCGCCAGCCAGCCTTGGCAAATTGATGCTGCAAAACAGC
GCACGTAATTTGGCGGATTC

Downstream 100 bases:

>100_bases
TCAATCCTCAGGTATGCCGATGGCCTCAGGTGGCCATCATTCCAGCCACTTCTGGAAAAACTGCGCCTGCCCCATGGCCG
GGTCCAGCTGGTAGCCGGCA

Product: major intrinsic protein

Products: NA

Alternate protein names: Phosphotyrosine Protein Phosphatase; MIP Family Protein; MIP Family Channel Protein; Low Molecular Weight Phosphotyrosine Protein Phosphatase; Transport Transmembrane Protein; Glycerol Uptake Transporter Protein MIP Family; Aquaglyceroporin Intrinsic Protein Family; Arsenate Reductase; Glycerol Uptake Facilitator Or Related Permease; Transmembrane ABC Transporter Protein; Transmembrane Abc Transporter Protein Intrinsic Protein; Integral Membrane Protein; Transmembrane ABC Transporter Protein Intrinsic Protein; Aquaporin/Glycerol Uptake Facilitator Protein; MIP Family Permease; Mip Family Channel Protein; Channel Transporter; Transmembrane Aquaporin

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MSQLSTSPDRQAHSQAAPPRLKHQLLAEFFGTAALLCAVIGSGIMAERLSGGNTAIALLANTLATVFALYVLIEVLGPVS
GAHFNPLVTLVLWSRSTPTHGGRTPTALFLIAGQLLGAVSGAWLAHAMFDMSVLQFSSKLRSGWGQWLAEGVATAGLILV
VLRAPKGKAAALVACYIGAAYWFTASTSFANPAAVLGRMLSDSFAGIAPISAPGFAVAEAAGAVAGVLLSRWLGATGAQP
HADGVQHP

Sequences:

>Translated_248_residues
MSQLSTSPDRQAHSQAAPPRLKHQLLAEFFGTAALLCAVIGSGIMAERLSGGNTAIALLANTLATVFALYVLIEVLGPVS
GAHFNPLVTLVLWSRSTPTHGGRTPTALFLIAGQLLGAVSGAWLAHAMFDMSVLQFSSKLRSGWGQWLAEGVATAGLILV
VLRAPKGKAAALVACYIGAAYWFTASTSFANPAAVLGRMLSDSFAGIAPISAPGFAVAEAAGAVAGVLLSRWLGATGAQP
HADGVQHP
>Mature_247_residues
SQLSTSPDRQAHSQAAPPRLKHQLLAEFFGTAALLCAVIGSGIMAERLSGGNTAIALLANTLATVFALYVLIEVLGPVSG
AHFNPLVTLVLWSRSTPTHGGRTPTALFLIAGQLLGAVSGAWLAHAMFDMSVLQFSSKLRSGWGQWLAEGVATAGLILVV
LRAPKGKAAALVACYIGAAYWFTASTSFANPAAVLGRMLSDSFAGIAPISAPGFAVAEAAGAVAGVLLSRWLGATGAQPH
ADGVQHP

Specific function: Unknown

COG id: COG0580

COG function: function code G; Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25410; Mature: 25279

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQLSTSPDRQAHSQAAPPRLKHQLLAEFFGTAALLCAVIGSGIMAERLSGGNTAIALLA
CCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHH
NTLATVFALYVLIEVLGPVSGAHFNPLVTLVLWSRSTPTHGGRTPTALFLIAGQLLGAVS
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHH
GAWLAHAMFDMSVLQFSSKLRSGWGQWLAEGVATAGLILVVLRAPKGKAAALVACYIGAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHH
YWFTASTSFANPAAVLGRMLSDSFAGIAPISAPGFAVAEAAGAVAGVLLSRWLGATGAQP
HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
HADGVQHP
CCCCCCCC
>Mature Secondary Structure 
SQLSTSPDRQAHSQAAPPRLKHQLLAEFFGTAALLCAVIGSGIMAERLSGGNTAIALLA
CCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHH
NTLATVFALYVLIEVLGPVSGAHFNPLVTLVLWSRSTPTHGGRTPTALFLIAGQLLGAVS
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHH
GAWLAHAMFDMSVLQFSSKLRSGWGQWLAEGVATAGLILVVLRAPKGKAAALVACYIGAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHH
YWFTASTSFANPAAVLGRMLSDSFAGIAPISAPGFAVAEAAGAVAGVLLSRWLGATGAQP
HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
HADGVQHP
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA