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The map label for this gene is ydfH [C]

Identifier: 91788083

GI number: 91788083

Start: 2306796

End: 2307506

Strand: Reverse

Name: ydfH [C]

Synonym: Bpro_2210

Alternate gene names: 91788083

Gene position: 2307506-2306796 (Counterclockwise)

Preceding gene: 91788084

Following gene: 91788082

Centisome position: 44.37

GC content: 65.12

Gene sequence:

>711_bases
ATGAGCACCACCACCCACCACCCCGCTCCCACCAGCCTGCGCGCGCAGGCCTACGAGAGCTTTCAGCAGCAGATCGTCGA
TGCCAATATCCGGCCCGGCCAGTTCATCTCGCAGCGCGAATTGATGCAGCTGCTGGGCATGCCGCTGGGCGCGGTGCGCG
AGCTGATTCCACGCCTGGAGGCCGAAGGCCTGCTCAAGACCGTGCCGCAGCGCGGCCTGCAGGTCGCCCATGTCGACCTG
AAGCTGATCAACAACGCCTTCCAGTTGCGCCGGCTGCTTGAGCGCGAGGCGGCGAGCCGCTTTGTCACCACCGTGTCCGA
TCGCGACCTGGCCGCCATCGAGCAGGCCCACCTCGACATCGTGCGGCGCGCACGCCTGACGGCGATCGACGACGACCTGC
TCAAGGACGCCACCGCGGTGGACTGGGGCCTGCACGACCTGATGATTGACGCACTGGGCAACGAGCTGATTTCCGAGGTC
TACCGCATCAACAGCCTGCGCGTGCGCCTCATCAAGCTCGAAGGCTCCACCCTTTCACCCGAAGTGCTGATTCCCGCCAT
GGAAGAGCACCTCTGGTTTATAGACGCCCTCAAGCGGCGCGACCCGCAAGCCGTGGTCGACCGCCTGAGCCACCACATCG
AGAGTGCGCACCGTCGCGTACTCGGACTGCCGCGGCCGGACATGCCGTGGTCTTTGGAGAAACTTTTATGA

Upstream 100 bases:

>100_bases
CAGTCAGCCTACCTGATCCTGCAGACCGGCGAGCAGCGCAAGTACGGCAACATCGTGCTGCGCAAAGGCGTCATTGCCAG
CGACGACGAATGACCAAGGC

Downstream 100 bases:

>100_bases
CCGAACCCCAAACTTCCACCAAATCGCTGGCATTCCGTGGCATCTGGCCCGCCCTGCTCACGCCGCTGCATGCCGACCTG
AGCATTGACCACGCCAAATT

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; Transcriptional Regulator GntR Family Protein; GntR Domain-Containing Protein; Transcriptional Regulator Protein; Transcriptional Regulator Gntr Family

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MSTTTHHPAPTSLRAQAYESFQQQIVDANIRPGQFISQRELMQLLGMPLGAVRELIPRLEAEGLLKTVPQRGLQVAHVDL
KLINNAFQLRRLLEREAASRFVTTVSDRDLAAIEQAHLDIVRRARLTAIDDDLLKDATAVDWGLHDLMIDALGNELISEV
YRINSLRVRLIKLEGSTLSPEVLIPAMEEHLWFIDALKRRDPQAVVDRLSHHIESAHRRVLGLPRPDMPWSLEKLL

Sequences:

>Translated_236_residues
MSTTTHHPAPTSLRAQAYESFQQQIVDANIRPGQFISQRELMQLLGMPLGAVRELIPRLEAEGLLKTVPQRGLQVAHVDL
KLINNAFQLRRLLEREAASRFVTTVSDRDLAAIEQAHLDIVRRARLTAIDDDLLKDATAVDWGLHDLMIDALGNELISEV
YRINSLRVRLIKLEGSTLSPEVLIPAMEEHLWFIDALKRRDPQAVVDRLSHHIESAHRRVLGLPRPDMPWSLEKLL
>Mature_235_residues
STTTHHPAPTSLRAQAYESFQQQIVDANIRPGQFISQRELMQLLGMPLGAVRELIPRLEAEGLLKTVPQRGLQVAHVDLK
LINNAFQLRRLLEREAASRFVTTVSDRDLAAIEQAHLDIVRRARLTAIDDDLLKDATAVDWGLHDLMIDALGNELISEVY
RINSLRVRLIKLEGSTLSPEVLIPAMEEHLWFIDALKRRDPQAVVDRLSHHIESAHRRVLGLPRPDMPWSLEKLL

Specific function: Unknown

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26794; Mature: 26663

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTTHHPAPTSLRAQAYESFQQQIVDANIRPGQFISQRELMQLLGMPLGAVRELIPRLE
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
AEGLLKTVPQRGLQVAHVDLKLINNAFQLRRLLEREAASRFVTTVSDRDLAAIEQAHLDI
HHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
VRRARLTAIDDDLLKDATAVDWGLHDLMIDALGNELISEVYRINSLRVRLIKLEGSTLSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCC
EVLIPAMEEHLWFIDALKRRDPQAVVDRLSHHIESAHRRVLGLPRPDMPWSLEKLL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCC
>Mature Secondary Structure 
STTTHHPAPTSLRAQAYESFQQQIVDANIRPGQFISQRELMQLLGMPLGAVRELIPRLE
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
AEGLLKTVPQRGLQVAHVDLKLINNAFQLRRLLEREAASRFVTTVSDRDLAAIEQAHLDI
HHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
VRRARLTAIDDDLLKDATAVDWGLHDLMIDALGNELISEVYRINSLRVRLIKLEGSTLSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCC
EVLIPAMEEHLWFIDALKRRDPQAVVDRLSHHIESAHRRVLGLPRPDMPWSLEKLL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA