| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788080
Identifier: 91788080
GI number: 91788080
Start: 2304268
End: 2304747
Strand: Reverse
Name: 91788080
Synonym: Bpro_2207
Alternate gene names: NA
Gene position: 2304747-2304268 (Counterclockwise)
Preceding gene: 91788081
Following gene: 91788079
Centisome position: 44.32
GC content: 58.75
Gene sequence:
>480_bases ATGAAAACCTGGCCTAAAAAGGCTGCCGACCTGATCGGCGGCGGGTTATTCCTGACTCTGTTCATCGTGTTTGTGATCCA GGTCACGGCACGCTTCGGGTTCAACAAACCGATGGCATGGACCGACGAAGCCGCCGTGATCCTGTATGTCTGGGTCATTC TGTGGGCTGCTGCTTTTATCGTGCCCGAGCGTGAACACGTGGTGTTCGACCTGGTCTGGAACAGCGTCAGCCGACGCGCC CGGCAGGTGATGCAGATCGCAGGCAACCTGATGATTGGCGGGCTGGCGCTGTGCGGCATTCCGGCCAGCTGGGACTATGT GCATTTCATGGCCCGGGAAGGAACACCCGTGCTGGGCCTGTCCTTCATGTGGGTGTTTTTGCCTTTTGTGCTGCTGCTGG CGGCACTGGTTGTTCGCTCTGCGTGGGCCATCTGGAACGCGATTCGGGGTGTTGGTCTTGAAGCGGAGTTGCGCATATGA
Upstream 100 bases:
>100_bases TGCAGGCCACCTACCTGAACTCGGAGTACGCCAAAGCCTGGCCCAAAGGCCTGCTTGAGCGCATCAACGCCACCAAGTAA ATCCGGCACGCCACATCCCC
Downstream 100 bases:
>100_bases CATCCGGAATCCTCGTTCTTGTTCTCGTGCTGGTGGCCGGCATGCTGCTGCGCATGCCCATCGGTTTTTCGATGCTGGCC TCGGGCATTGCCTACCTGAT
Product: tripartite ATP-independent periplasmic transporter DctQ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MKTWPKKAADLIGGGLFLTLFIVFVIQVTARFGFNKPMAWTDEAAVILYVWVILWAAAFIVPEREHVVFDLVWNSVSRRA RQVMQIAGNLMIGGLALCGIPASWDYVHFMAREGTPVLGLSFMWVFLPFVLLLAALVVRSAWAIWNAIRGVGLEAELRI
Sequences:
>Translated_159_residues MKTWPKKAADLIGGGLFLTLFIVFVIQVTARFGFNKPMAWTDEAAVILYVWVILWAAAFIVPEREHVVFDLVWNSVSRRA RQVMQIAGNLMIGGLALCGIPASWDYVHFMAREGTPVLGLSFMWVFLPFVLLLAALVVRSAWAIWNAIRGVGLEAELRI >Mature_159_residues MKTWPKKAADLIGGGLFLTLFIVFVIQVTARFGFNKPMAWTDEAAVILYVWVILWAAAFIVPEREHVVFDLVWNSVSRRA RQVMQIAGNLMIGGLALCGIPASWDYVHFMAREGTPVLGLSFMWVFLPFVLLLAALVVRSAWAIWNAIRGVGLEAELRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17820; Mature: 17820
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTWPKKAADLIGGGLFLTLFIVFVIQVTARFGFNKPMAWTDEAAVILYVWVILWAAAFI CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH VPEREHVVFDLVWNSVSRRARQVMQIAGNLMIGGLALCGIPASWDYVHFMAREGTPVLGL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHH SFMWVFLPFVLLLAALVVRSAWAIWNAIRGVGLEAELRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECC >Mature Secondary Structure MKTWPKKAADLIGGGLFLTLFIVFVIQVTARFGFNKPMAWTDEAAVILYVWVILWAAAFI CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH VPEREHVVFDLVWNSVSRRARQVMQIAGNLMIGGLALCGIPASWDYVHFMAREGTPVLGL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHH SFMWVFLPFVLLLAALVVRSAWAIWNAIRGVGLEAELRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA