| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is mprA [C]
Identifier: 91788070
GI number: 91788070
Start: 2292335
End: 2292847
Strand: Reverse
Name: mprA [C]
Synonym: Bpro_2197
Alternate gene names: 91788070
Gene position: 2292847-2292335 (Counterclockwise)
Preceding gene: 91788073
Following gene: 91788068
Centisome position: 44.09
GC content: 65.5
Gene sequence:
>513_bases GTGCCTGCCTTCCATAACCTTTCCAAACTTTACGCGCGCCCCGGTTTTTTGCTGCGTCGCGCGCACCAGATCTCGGCCGC CGTTTTCGAAGACGAATGCCGCAGTGTCGGGCTGACACCCGCGCAGTTCGGCGTGCTCAGTGTGCTGCGCGCCAGCCCTG GCCTGGACCAGTCCACGCTGGCACGCGCGCTGGGTTTTGACAAGGTGACGGTGCTGCGCGTGTTGCGCGGCCTGGAAACG CGGGGACTGATAGAGCGCGTGCCCGCACCTTCGAGCCGGCGCAACTTGTCGATTTCCCTGTCACCCGAGGGGCTCGCCCT GCTGAAACAGGCACAGGAACCCGCCGAGCGCGCCTACAGCCGCCTGATGGCGCCGCTGGACAATACGCAGCAAAACCAGC TGGTCCAGCTGCTGCAGTTGCTGACAGCCGGGCTGGAAGACGAGGCGCGGGCCCCTTTTGTGCCTCCAGCGCAAGATACG GACGAGCCCAGGGGTATGCCGGGGGCGAAGTAA
Upstream 100 bases:
>100_bases AAATCAACAGGGCACAATCCATGAATTCCCTGAGCCCCCGAATACTTGGATACCGTAGTCTTTCCTTAGCCCCTGAGTTG ACCGGCTCTGACCAGATACT
Downstream 100 bases:
>100_bases TGTTTGGTACTCCGACCCAGAAGTACTAGCCATTGGTGGCTTGTATGCCCCATTTGGCCAGTGCGGCATCGTCGCTCACG CGCGCATCGACCCAGCGCGC
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MPAFHNLSKLYARPGFLLRRAHQISAAVFEDECRSVGLTPAQFGVLSVLRASPGLDQSTLARALGFDKVTVLRVLRGLET RGLIERVPAPSSRRNLSISLSPEGLALLKQAQEPAERAYSRLMAPLDNTQQNQLVQLLQLLTAGLEDEARAPFVPPAQDT DEPRGMPGAK
Sequences:
>Translated_170_residues MPAFHNLSKLYARPGFLLRRAHQISAAVFEDECRSVGLTPAQFGVLSVLRASPGLDQSTLARALGFDKVTVLRVLRGLET RGLIERVPAPSSRRNLSISLSPEGLALLKQAQEPAERAYSRLMAPLDNTQQNQLVQLLQLLTAGLEDEARAPFVPPAQDT DEPRGMPGAK >Mature_169_residues PAFHNLSKLYARPGFLLRRAHQISAAVFEDECRSVGLTPAQFGVLSVLRASPGLDQSTLARALGFDKVTVLRVLRGLETR GLIERVPAPSSRRNLSISLSPEGLALLKQAQEPAERAYSRLMAPLDNTQQNQLVQLLQLLTAGLEDEARAPFVPPAQDTD EPRGMPGAK
Specific function: May be involved in the regulation of genes for 4- hydroxybenzoyl-CoA reductase [H]
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH marR-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000835 - InterPro: IPR023187 - InterPro: IPR011991 [H]
Pfam domain/function: PF01047 MarR [H]
EC number: NA
Molecular weight: Translated: 18521; Mature: 18389
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAFHNLSKLYARPGFLLRRAHQISAAVFEDECRSVGLTPAQFGVLSVLRASPGLDQSTL CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHH ARALGFDKVTVLRVLRGLETRGLIERVPAPSSRRNLSISLSPEGLALLKQAQEPAERAYS HHHHCCCHHHHHHHHHCCCHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHH RLMAPLDNTQQNQLVQLLQLLTAGLEDEARAPFVPPAQDTDEPRGMPGAK HHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PAFHNLSKLYARPGFLLRRAHQISAAVFEDECRSVGLTPAQFGVLSVLRASPGLDQSTL CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHH ARALGFDKVTVLRVLRGLETRGLIERVPAPSSRRNLSISLSPEGLALLKQAQEPAERAYS HHHHCCCHHHHHHHHHCCCHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHH RLMAPLDNTQQNQLVQLLQLLTAGLEDEARAPFVPPAQDTDEPRGMPGAK HHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9490068 [H]