| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is thrC [H]
Identifier: 91788064
GI number: 91788064
Start: 2286979
End: 2288409
Strand: Direct
Name: thrC [H]
Synonym: Bpro_2191
Alternate gene names: 91788064
Gene position: 2286979-2288409 (Clockwise)
Preceding gene: 91788063
Following gene: 91788065
Centisome position: 43.98
GC content: 60.59
Gene sequence:
>1431_bases ATGATGCGCTACATCTCCACCCGCGCCGCATCCGGCGATATGGCTGACCGCAAGCGCTTTTGCGAAATCCTGCTTGAAGG TCTGGCGCCTGATGGCGGTTTGTACCTGCCGGAGCGCTATCCGCAGGTGGACGACGCGACGCTGACGAAATGGCGCGGCC TGTCCTATGGCGACCTTGCGTTTGAAGTCCTGTCGCTCTATGTCGACGATATTCCGCCGGCGGACCTGAAGGCGATCTGC GAGAAGACCTATACCGAAGAGGTTTTTGGAACGAAAGAGATCGTTCCGCTGAAAAAACTGCAAGAGGGCCTGTACCTCGA AGCCCTCTCGAACGGCCCCACACTCGCCTTCAAGGACATGGCCATGCAATTGCTGGGCAACCTGTTCGAGTACGAACTGG CCCGCCGCGGCGAAGAGCTGAACATCTTGGGGGCCACCAGCGGCGATACCGGCAGTGCGGCCGAATACGCGATGCGCGGC AAAAAGGGCGTGCGGGTTTTCATGACCTCGCCGAATGGCCGCATGAGCCCGTTCCAGCAGGCGCAGATGTTCAGCCTGCA GGACCCGAACATCCACAATCTCGCGCTGGAAGGCGTGTTTGATGACTGCCAGGACATCGTCAAGGCGGTGTCCAATGACC TGGATTTCAAGCGCCAGTACAAGATTGGCACGGTCAATTCCATCAACTGGGCGCGCTTGATGGCGCAGGTGGTGTATTAC TTCGCCGGCTATTTCGAAGCCACGACATCGAACACCGAAAAAGTCAGCTTTACCGTGCCGTCGGGCAACTTCGGCAATGT CTGCGCCGGCCATGTGGCCCGCATGATGGGTTTGCCCATTGCCAAGCTGGTGGTGGCGACCAACGAGAACGACGTGCTGG ACGAATTCTTTCGCACCGGGGTCTACCGCGTGCGGGCCGGCGCCGACACGCATGAGACCTCCAGCCCGTCAATGGACATT TCCAAAGCCTCGAACTTCGAGCGTTTTGTGTTCGACCTGCTGGGCCGGGACGCGACGCGCATCGCCGAACTGTTCGGAAA CCGGTTGTCGGCACAGGGCAGTTTTGACCTGAGCGGCGATGCCGCCTTCCAGGCAGCCGCGCAGCGCTACGGGTTTGCCA GCGGCACGAGCACCCACGCCGACCGGTTGCAGACGATTCGCGACACCTTCCAGCGCCTGGGTACCATGATCGATACGCAT ACCGCCGACGGCCTGAAGGTGGCGCGTACGCACCTGCAGGTGGGTGTGCCCATGATCGTGCTCGAGACGGCCCTGCCGAT CAAGTTCGCCGAAACCATCGAAGAGGCGTTGGGCCGCTTGCCGACCCGGCCCGCAAAGTTCGAAGGCATAGAGGACTTGC CCAAGCGTGTGCAGGTCATGCCCGCCGATGTTGACCTGGTCAAGGCCTATATCGCCAACAATGTGCATTGA
Upstream 100 bases:
>100_bases GTATCCGCAAGGAGGAACTGGCTTAAATGAAATTCCCCCACGTTCACTTTGTTCTCGCCCCCCCGGGGGGCGCATCGGCC TTCGGGCGGCCGGGCGGTCG
Downstream 100 bases:
>100_bases GTGGCTCTCCAGTCCTTTTCGGACGGGCATTACCAGCCATTGAATCAGTAGCAAACCAGGATCGGTGAAAAACTGTTTAT GAACGTGGTTGCATTTGCCG
Product: threonine synthase
Products: NA
Alternate protein names: TS [H]
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MMRYISTRAASGDMADRKRFCEILLEGLAPDGGLYLPERYPQVDDATLTKWRGLSYGDLAFEVLSLYVDDIPPADLKAIC EKTYTEEVFGTKEIVPLKKLQEGLYLEALSNGPTLAFKDMAMQLLGNLFEYELARRGEELNILGATSGDTGSAAEYAMRG KKGVRVFMTSPNGRMSPFQQAQMFSLQDPNIHNLALEGVFDDCQDIVKAVSNDLDFKRQYKIGTVNSINWARLMAQVVYY FAGYFEATTSNTEKVSFTVPSGNFGNVCAGHVARMMGLPIAKLVVATNENDVLDEFFRTGVYRVRAGADTHETSSPSMDI SKASNFERFVFDLLGRDATRIAELFGNRLSAQGSFDLSGDAAFQAAAQRYGFASGTSTHADRLQTIRDTFQRLGTMIDTH TADGLKVARTHLQVGVPMIVLETALPIKFAETIEEALGRLPTRPAKFEGIEDLPKRVQVMPADVDLVKAYIANNVH
Sequences:
>Translated_476_residues MMRYISTRAASGDMADRKRFCEILLEGLAPDGGLYLPERYPQVDDATLTKWRGLSYGDLAFEVLSLYVDDIPPADLKAIC EKTYTEEVFGTKEIVPLKKLQEGLYLEALSNGPTLAFKDMAMQLLGNLFEYELARRGEELNILGATSGDTGSAAEYAMRG KKGVRVFMTSPNGRMSPFQQAQMFSLQDPNIHNLALEGVFDDCQDIVKAVSNDLDFKRQYKIGTVNSINWARLMAQVVYY FAGYFEATTSNTEKVSFTVPSGNFGNVCAGHVARMMGLPIAKLVVATNENDVLDEFFRTGVYRVRAGADTHETSSPSMDI SKASNFERFVFDLLGRDATRIAELFGNRLSAQGSFDLSGDAAFQAAAQRYGFASGTSTHADRLQTIRDTFQRLGTMIDTH TADGLKVARTHLQVGVPMIVLETALPIKFAETIEEALGRLPTRPAKFEGIEDLPKRVQVMPADVDLVKAYIANNVH >Mature_476_residues MMRYISTRAASGDMADRKRFCEILLEGLAPDGGLYLPERYPQVDDATLTKWRGLSYGDLAFEVLSLYVDDIPPADLKAIC EKTYTEEVFGTKEIVPLKKLQEGLYLEALSNGPTLAFKDMAMQLLGNLFEYELARRGEELNILGATSGDTGSAAEYAMRG KKGVRVFMTSPNGRMSPFQQAQMFSLQDPNIHNLALEGVFDDCQDIVKAVSNDLDFKRQYKIGTVNSINWARLMAQVVYY FAGYFEATTSNTEKVSFTVPSGNFGNVCAGHVARMMGLPIAKLVVATNENDVLDEFFRTGVYRVRAGADTHETSSPSMDI SKASNFERFVFDLLGRDATRIAELFGNRLSAQGSFDLSGDAAFQAAAQRYGFASGTSTHADRLQTIRDTFQRLGTMIDTH TADGLKVARTHLQVGVPMIVLETALPIKFAETIEEALGRLPTRPAKFEGIEDLPKRVQVMPADVDLVKAYIANNVH
Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine [H]
COG id: COG0498
COG function: function code E; Threonine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine synthase family [H]
Homologues:
Organism=Homo sapiens, GI153792148, Length=511, Percent_Identity=32.4853228962818, Blast_Score=226, Evalue=4e-59, Organism=Homo sapiens, GI149193323, Length=468, Percent_Identity=29.9145299145299, Blast_Score=216, Evalue=3e-56, Organism=Escherichia coli, GI1786185, Length=463, Percent_Identity=28.2937365010799, Blast_Score=186, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6319901, Length=467, Percent_Identity=41.3276231263383, Blast_Score=333, Evalue=2e-92,
Paralogues:
None
Copy number: 560 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR004450 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.2.3.1 [H]
Molecular weight: Translated: 52571; Mature: 52571
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRYISTRAASGDMADRKRFCEILLEGLAPDGGLYLPERYPQVDDATLTKWRGLSYGDLA CCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHCCCCCHHHH FEVLSLYVDDIPPADLKAICEKTYTEEVFGTKEIVPLKKLQEGLYLEALSNGPTLAFKDM HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEECCCCCCCHHHHH AMQLLGNLFEYELARRGEELNILGATSGDTGSAAEYAMRGKKGVRVFMTSPNGRMSPFQQ HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCHHH AQMFSLQDPNIHNLALEGVFDDCQDIVKAVSNDLDFKRQYKIGTVNSINWARLMAQVVYY HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCCCHHHHHHHHHHHH FAGYFEATTSNTEKVSFTVPSGNFGNVCAGHVARMMGLPIAKLVVATNENDVLDEFFRTG HHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCHHHEEEECCCCHHHHHHHHCC VYRVRAGADTHETSSPSMDISKASNFERFVFDLLGRDATRIAELFGNRLSAQGSFDLSGD CEEEECCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCH AAFQAAAQRYGFASGTSTHADRLQTIRDTFQRLGTMIDTHTADGLKVARTHLQVGVPMIV HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEE LETALPIKFAETIEEALGRLPTRPAKFEGIEDLPKRVQVMPADVDLVKAYIANNVH EHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHEECCCHHHHHHHHHHCCCC >Mature Secondary Structure MMRYISTRAASGDMADRKRFCEILLEGLAPDGGLYLPERYPQVDDATLTKWRGLSYGDLA CCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHCCCCCHHHH FEVLSLYVDDIPPADLKAICEKTYTEEVFGTKEIVPLKKLQEGLYLEALSNGPTLAFKDM HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEECCCCCCCHHHHH AMQLLGNLFEYELARRGEELNILGATSGDTGSAAEYAMRGKKGVRVFMTSPNGRMSPFQQ HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCHHH AQMFSLQDPNIHNLALEGVFDDCQDIVKAVSNDLDFKRQYKIGTVNSINWARLMAQVVYY HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCCCHHHHHHHHHHHH FAGYFEATTSNTEKVSFTVPSGNFGNVCAGHVARMMGLPIAKLVVATNENDVLDEFFRTG HHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCHHHEEEECCCCHHHHHHHHCC VYRVRAGADTHETSSPSMDISKASNFERFVFDLLGRDATRIAELFGNRLSAQGSFDLSGD CEEEECCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCH AAFQAAAQRYGFASGTSTHADRLQTIRDTFQRLGTMIDTHTADGLKVARTHLQVGVPMIV HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEE LETALPIKFAETIEEALGRLPTRPAKFEGIEDLPKRVQVMPADVDLVKAYIANNVH EHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHEECCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2127631; 12948626 [H]