| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is icfG [H]
Identifier: 91787955
GI number: 91787955
Start: 2166140
End: 2167840
Strand: Reverse
Name: icfG [H]
Synonym: Bpro_2082
Alternate gene names: 91787955
Gene position: 2167840-2166140 (Counterclockwise)
Preceding gene: 91787956
Following gene: 91787952
Centisome position: 41.69
GC content: 72.19
Gene sequence:
>1701_bases ATGACGCCCGACCCCGCCCCGCTCGCGCTGGTGGTGGACGACCAGCCGGTGACCCGCCTCATGGTGAAGCGGGCGCTGGA GCGCTTCGGCTGCGCTCCGGTACTGGAGGCCGCCGACGGGATCGCGGCGCAGGCGATCCTGCGTGAGCACCCGGATGTCG CGCTGGTTCTGACGGACATCATGATGCCCAGGATGGACGGGCTGGAGCTGCTGCACTGGGGGCGCGAGACGGTGCCGGGT GCCATCTGGATCGTCCTCTCCGGGCTGGACACCTTCGACTCGGCGGTGGCGGCGATCCGGTTCGGGGCGTTCGACTTCCT GCCGAAGCCGCCGCGGCTGGAAGAGATGGAGGTCTCGGTGCGCAACGCGCTGGAGCGGCGGCGGCTGCTGGCGGAGCAGG CGCGGCTGCACGCGGAGCTGCAGCGAAAGGTGCGGGAGCTGGAGGAGAAGTCGGAGCTGCTGCGGCGCGACCTGGAGCGG GCGGAGGTGATCCAGCGCGCGCTTCTGCCGGGCAGCCCGCCGCCGGTGGAGAGCTACTGCGTCCAGGCGGTCTACCGGCC GGGACAGCACGTGGGCGGTGACCTCTACGACGTGGTCCGGCTCGGCGAGCGGCACCTGGCCTTCTACCTGGCGGACGCCA CCGGTCACGGCGTCACCTCGGCGATGCTCTCGGTGCTGTTCAAGCAGCGGCTGGTGCTGGTGGACCCGGAGACGGGCCGC GCGCTGGCACCGGCGGCGGTGCTGGACGCGGTGAACCGCTCGCTCTGCCAGTCGATCGAAGCGCCGGGTCTCTTTGTGAC CGCCGTCATTGGCCTGCTCGACACGGTGGAGGGTAGCGTGACGCTGGCATCCGCGGGGCACCCGCCCGTGCTGCACGTGC GCGAGGGCCGGGAGACGCGCCTGATCCGGCGCACGGGGCCGGCGCTGGGGCTGGCGCTGGATGCACGCTTCCACGAGGAG CGGCTCTGGCTGGCGCCGGGCGATCGAATGCTCCTCTACACCGATGGGCTCCTCCCGTCGGGGACGGAGCGGGAGCTGGA ACGGCTCAAGCGGGTACTCTCCATGCCGCTCTCCAGCGCGCAGGAGATGTTGGGGGAGTTGCGCGGTGGCGCCGCCACGG ACCCGGACCCGGACGACGTGACCCTCCTCCTGATCGACGCGCACGCCGGCCCCTCCTCGTTCGACAACGGCGCCGCGAGC CCCAACCTGACCGCCTCGGGCGCGGCGCAGCCGGGCGGCGAGGTCGTCTTCTACGGAGAGACGGAGGACGCCGTGCACCT CGCGCTGCGCGGCCGGGCCACCTGGATGCACTGCGACGCCTTCTACGAGACCGCGCGTGCCGTACTGGAGGAGGGGCGGC CGCTGGTGCTGGACCTCTCCGGCTGCGACTACCTGGACAGCACCTGCCTCGGCACGGTGCACGAGCTGGTCGGCCGGGGC CGCGTGGTGCTTGCGGGGGTGACGCCTGTGGTGCGCGCGCTCTTCGAGGAGCTGAGCATGGATCGGGTGCTGGCCAGCAT CCGCGAGGACGTTACCGCCGCGCCCGAGCTCTACGCGCTGAGCACCCGGCACGACGACCCGGCGGCGTGGCGTCAGCGGA TACTGCACGCGCACGAGGCGCTCTCAGGGCTGAGCGAGCACAACCGCGAGGAGTTCCGGGGGGTGGTCGAGTCGCTGCGC GGGGAGATAGACGGCGGATGA
Upstream 100 bases:
>100_bases GAGGAGAAAAACCGATGATGCGTATAGAAGAAAAAGAAGAAAAACAGGGCGACGCACGGCATGTGTGGCACACCGCCTGC GACCCTTTCCCTCGCACCCC
Downstream 100 bases:
>100_bases TCGCCTGCGCAGATCCCGCCTGGTCCGCGCGCCGGGGCGCGTGCCGATGAACCCGCGCATCAATCAAGGCGCGGCCGGCA CGGCGACTTCAACAAGACCC
Product: anti-sigma-factor antagonist domain-containing protein
Products: NADP; 2 glutathione [C]
Alternate protein names: NA
Number of amino acids: Translated: 566; Mature: 565
Protein sequence:
>566_residues MTPDPAPLALVVDDQPVTRLMVKRALERFGCAPVLEAADGIAAQAILREHPDVALVLTDIMMPRMDGLELLHWGRETVPG AIWIVLSGLDTFDSAVAAIRFGAFDFLPKPPRLEEMEVSVRNALERRRLLAEQARLHAELQRKVRELEEKSELLRRDLER AEVIQRALLPGSPPPVESYCVQAVYRPGQHVGGDLYDVVRLGERHLAFYLADATGHGVTSAMLSVLFKQRLVLVDPETGR ALAPAAVLDAVNRSLCQSIEAPGLFVTAVIGLLDTVEGSVTLASAGHPPVLHVREGRETRLIRRTGPALGLALDARFHEE RLWLAPGDRMLLYTDGLLPSGTERELERLKRVLSMPLSSAQEMLGELRGGAATDPDPDDVTLLLIDAHAGPSSFDNGAAS PNLTASGAAQPGGEVVFYGETEDAVHLALRGRATWMHCDAFYETARAVLEEGRPLVLDLSGCDYLDSTCLGTVHELVGRG RVVLAGVTPVVRALFEELSMDRVLASIREDVTAAPELYALSTRHDDPAAWRQRILHAHEALSGLSEHNREEFRGVVESLR GEIDGG
Sequences:
>Translated_566_residues MTPDPAPLALVVDDQPVTRLMVKRALERFGCAPVLEAADGIAAQAILREHPDVALVLTDIMMPRMDGLELLHWGRETVPG AIWIVLSGLDTFDSAVAAIRFGAFDFLPKPPRLEEMEVSVRNALERRRLLAEQARLHAELQRKVRELEEKSELLRRDLER AEVIQRALLPGSPPPVESYCVQAVYRPGQHVGGDLYDVVRLGERHLAFYLADATGHGVTSAMLSVLFKQRLVLVDPETGR ALAPAAVLDAVNRSLCQSIEAPGLFVTAVIGLLDTVEGSVTLASAGHPPVLHVREGRETRLIRRTGPALGLALDARFHEE RLWLAPGDRMLLYTDGLLPSGTERELERLKRVLSMPLSSAQEMLGELRGGAATDPDPDDVTLLLIDAHAGPSSFDNGAAS PNLTASGAAQPGGEVVFYGETEDAVHLALRGRATWMHCDAFYETARAVLEEGRPLVLDLSGCDYLDSTCLGTVHELVGRG RVVLAGVTPVVRALFEELSMDRVLASIREDVTAAPELYALSTRHDDPAAWRQRILHAHEALSGLSEHNREEFRGVVESLR GEIDGG >Mature_565_residues TPDPAPLALVVDDQPVTRLMVKRALERFGCAPVLEAADGIAAQAILREHPDVALVLTDIMMPRMDGLELLHWGRETVPGA IWIVLSGLDTFDSAVAAIRFGAFDFLPKPPRLEEMEVSVRNALERRRLLAEQARLHAELQRKVRELEEKSELLRRDLERA EVIQRALLPGSPPPVESYCVQAVYRPGQHVGGDLYDVVRLGERHLAFYLADATGHGVTSAMLSVLFKQRLVLVDPETGRA LAPAAVLDAVNRSLCQSIEAPGLFVTAVIGLLDTVEGSVTLASAGHPPVLHVREGRETRLIRRTGPALGLALDARFHEER LWLAPGDRMLLYTDGLLPSGTERELERLKRVLSMPLSSAQEMLGELRGGAATDPDPDDVTLLLIDAHAGPSSFDNGAASP NLTASGAAQPGGEVVFYGETEDAVHLALRGRATWMHCDAFYETARAVLEEGRPLVLDLSGCDYLDSTCLGTVHELVGRGR VVLAGVTPVVRALFEELSMDRVLASIREDVTAAPELYALSTRHDDPAAWRQRILHAHEALSGLSEHNREEFRGVVESLRG EIDGG
Specific function: Involved in cross-regulation of inorganic carbon and glucose metabolisms [H]
COG id: COG2208
COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PP2C-like domain [H]
Homologues:
Organism=Escherichia coli, GI1790299, Length=119, Percent_Identity=36.1344537815126, Blast_Score=62, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003660 - InterPro: IPR001932 - InterPro: IPR010822 [H]
Pfam domain/function: PF00672 HAMP; PF07228 SpoIIE [H]
EC number: NA
Molecular weight: Translated: 61663; Mature: 61532
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPDPAPLALVVDDQPVTRLMVKRALERFGCAPVLEAADGIAAQAILREHPDVALVLTDI CCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHCCCCCEEHHHHH MMPRMDGLELLHWGRETVPGAIWIVLSGLDTFDSAVAAIRFGAFDFLPKPPRLEEMEVSV HHCCCCCHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHH RNALERRRLLAEQARLHAELQRKVRELEEKSELLRRDLERAEVIQRALLPGSPPPVESYC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH VQAVYRPGQHVGGDLYDVVRLGERHLAFYLADATGHGVTSAMLSVLFKQRLVLVDPETGR HHHHHCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHCCEEEECCCCCC ALAPAAVLDAVNRSLCQSIEAPGLFVTAVIGLLDTVEGSVTLASAGHPPVLHVREGRETR CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCCHHH LIRRTGPALGLALDARFHEERLWLAPGDRMLLYTDGLLPSGTERELERLKRVLSMPLSSA HHHHCCCCCEEEEECCCCCCEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHH QEMLGELRGGAATDPDPDDVTLLLIDAHAGPSSFDNGAASPNLTASGAAQPGGEVVFYGE HHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC TEDAVHLALRGRATWMHCDAFYETARAVLEEGRPLVLDLSGCDYLDSTCLGTVHELVGRG CCCCEEEEEECCCEEEEHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCC RVVLAGVTPVVRALFEELSMDRVLASIREDVTAAPELYALSTRHDDPAAWRQRILHAHEA CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHH LSGLSEHNREEFRGVVESLRGEIDGG HHHHHHCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TPDPAPLALVVDDQPVTRLMVKRALERFGCAPVLEAADGIAAQAILREHPDVALVLTDI CCCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHCCCCCEEHHHHH MMPRMDGLELLHWGRETVPGAIWIVLSGLDTFDSAVAAIRFGAFDFLPKPPRLEEMEVSV HHCCCCCHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHH RNALERRRLLAEQARLHAELQRKVRELEEKSELLRRDLERAEVIQRALLPGSPPPVESYC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH VQAVYRPGQHVGGDLYDVVRLGERHLAFYLADATGHGVTSAMLSVLFKQRLVLVDPETGR HHHHHCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHCCEEEECCCCCC ALAPAAVLDAVNRSLCQSIEAPGLFVTAVIGLLDTVEGSVTLASAGHPPVLHVREGRETR CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCCHHH LIRRTGPALGLALDARFHEERLWLAPGDRMLLYTDGLLPSGTERELERLKRVLSMPLSSA HHHHCCCCCEEEEECCCCCCEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHH QEMLGELRGGAATDPDPDDVTLLLIDAHAGPSSFDNGAASPNLTASGAAQPGGEVVFYGE HHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC TEDAVHLALRGRATWMHCDAFYETARAVLEEGRPLVLDLSGCDYLDSTCLGTVHELVGRG CCCCEEEEEECCCEEEEHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCC RVVLAGVTPVVRALFEELSMDRVLASIREDVTAAPELYALSTRHDDPAAWRQRILHAHEA CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHH LSGLSEHNREEFRGVVESLRGEIDGG HHHHHHCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADPH2; oxidized glutathione [C]
Specific reaction: NADPH2 + oxidized glutathione = NADP + 2 glutathione [C]
General reaction: Oxidoreductases; Acting on NADH or NADPH; With a disulfide as acceptor [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8075401; 8905231 [H]