| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is acsA [H]
Identifier: 91787925
GI number: 91787925
Start: 2129728
End: 2131725
Strand: Direct
Name: acsA [H]
Synonym: Bpro_2049
Alternate gene names: 91787925
Gene position: 2129728-2131725 (Clockwise)
Preceding gene: 91787923
Following gene: 91787927
Centisome position: 40.95
GC content: 62.06
Gene sequence:
>1998_bases ATGAGTTCCGCCCCGTCGAACATCGAGTCCGTGCTGGTTGAAAACCGCGTATTTCCCCCCGGGCCGGCTACCGTCAAGGC CGCCCGCATTTCCGGCATGGAGGCTTACAACGCGATGTGCCGGGAGGCCGACAAGGATTTTGACCGCTTCTGGGCCAGGC TGGCCAGGGACAATCTCAGCTGGAAAAAACCTTTCAGCCAGGTTCTGGACGAGTCCAATGCACCGTTTTACCAATGGTTT GCCGATGGTGAACTGAACGCCTCCTACAACTGCCTGGACCGCCACCTGGGTACGCCGACAGAGAGCAAGAAGGCCATTAT TTTCGAGAGCGATGATGGCAAGGCGACCAGCGTCACTTATAAGGAACTGCATGCCAGGGTCAGTCAGTTTGCCAGTGCGC TCAAGGGCCTGGGGGTGAAGAAGGGCGACCGCGTCATCATCTACATGCCAATGACCATTGAAGGCGTTGTTGCCATGCAG GCCTGTGCCCGCATTGGTGCCACGCACTCGGTGGTGTTCGGTGGTTTCTCGGCCAAGAGCCTGCAGGAGCGCATCCAGGA CGCCGGTGCAGTCGCAGTCATTACCGCCAACTACCAGTTGCGCGGCGGCAAGGAGCTGCCGCTCAAGGCGATTGTGGACG AAGGCATCGCCATGGGCGGCTGCGAGTCGATCAAGAACGTGGTGGTCTACCAGCGCACCGCCACGCCCTGCAACATGGTG GCCGGGCGCGACAGCCTGATGCACGAGATCACCGCCAGGGCCGCAGCCACCTGCGAGCCGGAATTTGTGGGCGCCGAGCA TCCGCTGTTCATCCTGTACACGTCGGGCTCCACCGGCAAGCCCAAGGGCGTGCAGCACAGCACGGGCGGCTACCTGCTGT GGGCCAAGCTCACCATGGACTGGACCTTTGACATCCAGCCCGCCGATGTGTTCTGGTGCACCGCCGACATCGGCTGGATC ACCGGCCACACCTATGTGGCGTATGGCCCGCTGGCCGCTGGTGCGACGCAGGTCATCTTTGAAGGCATTCCGACTTACCC GAACGCCGGCCGGTTCTGGCAGATGATCGAGAAGCACAAGGTCACGATTTTTTACACAGCACCCACCGCCATCCGTTCAC TGATCAAGGCCGCTGAAGGCGATGAAAAAATACACCCGGCCCGCTCGGATCTGAGCAGCCTGCGCATTCTGGGCACGGTG GGCGAACCCATCAACCCCGAGGCCTGGATGTGGTACTACAAAAACATTGGTGGCGAGCGCTGCCCGATTGTGGATACCTT CTGGCAAACCGAGTCGGGCGGACACATGATCACGCCGCTGCCCGGCGCGACGCCGCTGGTTCCTGGCAGCTGCACCTTGC CGCTGCCCGGCATCATGGCCGCCATCGTCGACGAAACCGGCAAGGACTTGCCCAACGGCTCGGGCGGCCTGCTGGTGGTC AAACGCCCGTGGCCGTCCATGATTCGCGGCATCTGGAATGACCCCGAGCGCTTCAAGAAGAGCTACTTTCCGGAAGAAAT GGGCGGCACGATGTACCTGGCCGGCGACGGCGCGGTCCGCAATGCTGACAACGGCTATTTCCGCATCACCGGCCGGATTG ACGATGTGCTGAATGTGTCGGGCCACCGCATGGGCACCATGGAAATCGAATCGGCACTGGTGGCGCACTCGACCCTGGTG GCGGAGGCTGCCGTGGTAGGCCGCCCTGATGACCTGACCGGCGAGGCGATCGTGGCGTTTGTGGTGCTCAAGCGCTCGCG GCCCACGGGCGATGAGGCCAAGGCGATTGCCAAGGAGCTGCGCGACTGGGTCGGCAAGGAGATTGGCCCGATTGCCAAGC CCAAGGACATCCGGTTTGGTGACAACCTGCCCAAGACGCGCAGCGGCAAAATCATGCGCCGCCTGTTGCGCGGCATTGCC AAGGGTGAGGCTCTTACGCAGGACACCTCGACGCTGGAGAATCCGGCGATCCTCGATCAGTTGTCTGAAAACCTCTGA
Upstream 100 bases:
>100_bases CCGGATTTTGTAAGGTTCAAGCCAGTCAGTGGCTTGTAAGTGCGGGATATGACAGTATCGGCAGTATCACGCATCCCAAT GACAAACAGGAGACAAAGTA
Downstream 100 bases:
>100_bases GGAGGTCCTGGAGGGGCTGAAATTCACCCAACCGGGCCCCATTTCAAAACCGCAAAACCGCAAAACCGGTCAGGCCGCAG CGCCCACAAAAAAAGCCCGT
Product: acetyl-coenzyme A synthetase
Products: NA
Alternate protein names: Acetate--CoA ligase; Acyl-activating enzyme [H]
Number of amino acids: Translated: 665; Mature: 664
Protein sequence:
>665_residues MSSAPSNIESVLVENRVFPPGPATVKAARISGMEAYNAMCREADKDFDRFWARLARDNLSWKKPFSQVLDESNAPFYQWF ADGELNASYNCLDRHLGTPTESKKAIIFESDDGKATSVTYKELHARVSQFASALKGLGVKKGDRVIIYMPMTIEGVVAMQ ACARIGATHSVVFGGFSAKSLQERIQDAGAVAVITANYQLRGGKELPLKAIVDEGIAMGGCESIKNVVVYQRTATPCNMV AGRDSLMHEITARAAATCEPEFVGAEHPLFILYTSGSTGKPKGVQHSTGGYLLWAKLTMDWTFDIQPADVFWCTADIGWI TGHTYVAYGPLAAGATQVIFEGIPTYPNAGRFWQMIEKHKVTIFYTAPTAIRSLIKAAEGDEKIHPARSDLSSLRILGTV GEPINPEAWMWYYKNIGGERCPIVDTFWQTESGGHMITPLPGATPLVPGSCTLPLPGIMAAIVDETGKDLPNGSGGLLVV KRPWPSMIRGIWNDPERFKKSYFPEEMGGTMYLAGDGAVRNADNGYFRITGRIDDVLNVSGHRMGTMEIESALVAHSTLV AEAAVVGRPDDLTGEAIVAFVVLKRSRPTGDEAKAIAKELRDWVGKEIGPIAKPKDIRFGDNLPKTRSGKIMRRLLRGIA KGEALTQDTSTLENPAILDQLSENL
Sequences:
>Translated_665_residues MSSAPSNIESVLVENRVFPPGPATVKAARISGMEAYNAMCREADKDFDRFWARLARDNLSWKKPFSQVLDESNAPFYQWF ADGELNASYNCLDRHLGTPTESKKAIIFESDDGKATSVTYKELHARVSQFASALKGLGVKKGDRVIIYMPMTIEGVVAMQ ACARIGATHSVVFGGFSAKSLQERIQDAGAVAVITANYQLRGGKELPLKAIVDEGIAMGGCESIKNVVVYQRTATPCNMV AGRDSLMHEITARAAATCEPEFVGAEHPLFILYTSGSTGKPKGVQHSTGGYLLWAKLTMDWTFDIQPADVFWCTADIGWI TGHTYVAYGPLAAGATQVIFEGIPTYPNAGRFWQMIEKHKVTIFYTAPTAIRSLIKAAEGDEKIHPARSDLSSLRILGTV GEPINPEAWMWYYKNIGGERCPIVDTFWQTESGGHMITPLPGATPLVPGSCTLPLPGIMAAIVDETGKDLPNGSGGLLVV KRPWPSMIRGIWNDPERFKKSYFPEEMGGTMYLAGDGAVRNADNGYFRITGRIDDVLNVSGHRMGTMEIESALVAHSTLV AEAAVVGRPDDLTGEAIVAFVVLKRSRPTGDEAKAIAKELRDWVGKEIGPIAKPKDIRFGDNLPKTRSGKIMRRLLRGIA KGEALTQDTSTLENPAILDQLSENL >Mature_664_residues SSAPSNIESVLVENRVFPPGPATVKAARISGMEAYNAMCREADKDFDRFWARLARDNLSWKKPFSQVLDESNAPFYQWFA DGELNASYNCLDRHLGTPTESKKAIIFESDDGKATSVTYKELHARVSQFASALKGLGVKKGDRVIIYMPMTIEGVVAMQA CARIGATHSVVFGGFSAKSLQERIQDAGAVAVITANYQLRGGKELPLKAIVDEGIAMGGCESIKNVVVYQRTATPCNMVA GRDSLMHEITARAAATCEPEFVGAEHPLFILYTSGSTGKPKGVQHSTGGYLLWAKLTMDWTFDIQPADVFWCTADIGWIT GHTYVAYGPLAAGATQVIFEGIPTYPNAGRFWQMIEKHKVTIFYTAPTAIRSLIKAAEGDEKIHPARSDLSSLRILGTVG EPINPEAWMWYYKNIGGERCPIVDTFWQTESGGHMITPLPGATPLVPGSCTLPLPGIMAAIVDETGKDLPNGSGGLLVVK RPWPSMIRGIWNDPERFKKSYFPEEMGGTMYLAGDGAVRNADNGYFRITGRIDDVLNVSGHRMGTMEIESALVAHSTLVA EAAVVGRPDDLTGEAIVAFVVLKRSRPTGDEAKAIAKELRDWVGKEIGPIAKPKDIRFGDNLPKTRSGKIMRRLLRGIAK GEALTQDTSTLENPAILDQLSENL
Specific function: Enables The Cell To Use Acetate During Aerobic Growth To Generate Energy Via The Tca Cycle, And Biosynthetic Compounds Via The Glyoxylate Shunt. Acetylates Chey, The Response Regulator Involved In Flagellar Movement And Chemotaxis. [C]
COG id: COG0365
COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI8923896, Length=678, Percent_Identity=46.0176991150442, Blast_Score=570, Evalue=1e-162, Organism=Homo sapiens, GI253970489, Length=693, Percent_Identity=45.3102453102453, Blast_Score=567, Evalue=1e-161, Organism=Homo sapiens, GI28416953, Length=633, Percent_Identity=46.7614533965245, Blast_Score=539, Evalue=1e-153, Organism=Homo sapiens, GI13375727, Length=629, Percent_Identity=37.3608903020668, Blast_Score=388, Evalue=1e-107, Organism=Homo sapiens, GI31982927, Length=655, Percent_Identity=25.8015267175572, Blast_Score=186, Evalue=9e-47, Organism=Homo sapiens, GI42544132, Length=553, Percent_Identity=28.3905967450271, Blast_Score=179, Evalue=6e-45, Organism=Homo sapiens, GI38505220, Length=538, Percent_Identity=28.996282527881, Blast_Score=169, Evalue=6e-42, Organism=Homo sapiens, GI122937307, Length=538, Percent_Identity=27.1375464684015, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI58082049, Length=544, Percent_Identity=27.2058823529412, Blast_Score=162, Evalue=7e-40, Organism=Homo sapiens, GI157311624, Length=556, Percent_Identity=25.7194244604317, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI157311622, Length=556, Percent_Identity=25.7194244604317, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI115511026, Length=584, Percent_Identity=25.8561643835616, Blast_Score=147, Evalue=3e-35, Organism=Homo sapiens, GI187761345, Length=406, Percent_Identity=27.0935960591133, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI187761343, Length=406, Percent_Identity=27.0935960591133, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI195947378, Length=422, Percent_Identity=24.1706161137441, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI156151445, Length=593, Percent_Identity=23.2715008431703, Blast_Score=84, Evalue=6e-16, Organism=Escherichia coli, GI1790505, Length=647, Percent_Identity=51.0046367851623, Blast_Score=633, Evalue=0.0, Organism=Escherichia coli, GI1786529, Length=629, Percent_Identity=38.79173290938, Blast_Score=420, Evalue=1e-118, Organism=Escherichia coli, GI1788107, Length=559, Percent_Identity=25.9391771019678, Blast_Score=125, Evalue=1e-29, Organism=Escherichia coli, GI145693145, Length=545, Percent_Identity=25.1376146788991, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI1786810, Length=533, Percent_Identity=22.7016885553471, Blast_Score=87, Evalue=4e-18, Organism=Caenorhabditis elegans, GI71982997, Length=672, Percent_Identity=43.452380952381, Blast_Score=508, Evalue=1e-144, Organism=Caenorhabditis elegans, GI71983001, Length=675, Percent_Identity=43.4074074074074, Blast_Score=506, Evalue=1e-143, Organism=Caenorhabditis elegans, GI17569507, Length=660, Percent_Identity=23.3333333333333, Blast_Score=132, Evalue=7e-31, Organism=Caenorhabditis elegans, GI71985884, Length=606, Percent_Identity=23.1023102310231, Blast_Score=98, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71994690, Length=570, Percent_Identity=24.9122807017544, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71994694, Length=568, Percent_Identity=24.8239436619718, Blast_Score=94, Evalue=3e-19, Organism=Caenorhabditis elegans, GI71994703, Length=568, Percent_Identity=24.8239436619718, Blast_Score=94, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17559526, Length=565, Percent_Identity=24.6017699115044, Blast_Score=87, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17531443, Length=554, Percent_Identity=24.3682310469314, Blast_Score=85, Evalue=1e-16, Organism=Caenorhabditis elegans, GI115534440, Length=560, Percent_Identity=23.2142857142857, Blast_Score=68, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6323182, Length=645, Percent_Identity=48.5271317829457, Blast_Score=576, Evalue=1e-165, Organism=Saccharomyces cerevisiae, GI6319264, Length=666, Percent_Identity=48.4984984984985, Blast_Score=568, Evalue=1e-162, Organism=Saccharomyces cerevisiae, GI6319699, Length=552, Percent_Identity=22.6449275362319, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI24667955, Length=675, Percent_Identity=46.962962962963, Blast_Score=580, Evalue=1e-166, Organism=Drosophila melanogaster, GI62472339, Length=568, Percent_Identity=50.8802816901408, Blast_Score=545, Evalue=1e-155, Organism=Drosophila melanogaster, GI24667959, Length=531, Percent_Identity=51.2241054613936, Blast_Score=510, Evalue=1e-144, Organism=Drosophila melanogaster, GI21355225, Length=672, Percent_Identity=33.3333333333333, Blast_Score=332, Evalue=5e-91, Organism=Drosophila melanogaster, GI21355181, Length=560, Percent_Identity=24.1071428571429, Blast_Score=95, Evalue=2e-19, Organism=Drosophila melanogaster, GI24648260, Length=416, Percent_Identity=26.4423076923077, Blast_Score=86, Evalue=6e-17, Organism=Drosophila melanogaster, GI24656500, Length=376, Percent_Identity=27.3936170212766, Blast_Score=86, Evalue=1e-16, Organism=Drosophila melanogaster, GI24581924, Length=552, Percent_Identity=24.4565217391304, Blast_Score=79, Evalue=8e-15, Organism=Drosophila melanogaster, GI18859661, Length=396, Percent_Identity=25.2525252525253, Blast_Score=79, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011904 - InterPro: IPR020845 - InterPro: IPR000873 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.1 [H]
Molecular weight: Translated: 72409; Mature: 72277
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSAPSNIESVLVENRVFPPGPATVKAARISGMEAYNAMCREADKDFDRFWARLARDNLS CCCCCCHHHHHHHHCCCCCCCCCCEEHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHCCCC WKKPFSQVLDESNAPFYQWFADGELNASYNCLDRHLGTPTESKKAIIFESDDGKATSVTY HHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCEEEHHH KELHARVSQFASALKGLGVKKGDRVIIYMPMTIEGVVAMQACARIGATHSVVFGGFSAKS HHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCHHH LQERIQDAGAVAVITANYQLRGGKELPLKAIVDEGIAMGGCESIKNVVVYQRTATPCNMV HHHHHHCCCEEEEEEECEEECCCCCCCHHHHHHCCCCCCCHHHHCCEEEEEECCCCHHHH AGRDSLMHEITARAAATCEPEFVGAEHPLFILYTSGSTGKPKGVQHSTGGYLLWAKLTMD CCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCEECCCCEEEEEEEEEE WTFDIQPADVFWCTADIGWITGHTYVAYGPLAAGATQVIFEGIPTYPNAGRFWQMIEKHK EEEECCCCCEEEEECCCCEEECCCEEEECCHHCCHHHHHHCCCCCCCCCHHHHHHHHHCC VTIFYTAPTAIRSLIKAAEGDEKIHPARSDLSSLRILGTVGEPINPEAWMWYYKNIGGER EEEEEECHHHHHHHHHHCCCCCCCCCCHHHHHHEEEEEECCCCCCCCCEEHEECCCCCCC CPIVDTFWQTESGGHMITPLPGATPLVPGSCTLPLPGIMAAIVDETGKDLPNGSGGLLVV CCEEEHHCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEE KRPWPSMIRGIWNDPERFKKSYFPEEMGGTMYLAGDGAVRNADNGYFRITGRIDDVLNVS ECCCHHHHHHCCCCHHHHHHHCCHHHHCCEEEEECCCCEECCCCCEEEEEECCCHHHCCC GHRMGTMEIESALVAHSTLVAEAAVVGRPDDLTGEAIVAFVVLKRSRPTGDEAKAIAKEL CCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH RDWVGKEIGPIAKPKDIRFGDNLPKTRSGKIMRRLLRGIAKGEALTQDTSTLENPAILDQ HHHHCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHH LSENL HHHCC >Mature Secondary Structure SSAPSNIESVLVENRVFPPGPATVKAARISGMEAYNAMCREADKDFDRFWARLARDNLS CCCCCHHHHHHHHCCCCCCCCCCEEHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHCCCC WKKPFSQVLDESNAPFYQWFADGELNASYNCLDRHLGTPTESKKAIIFESDDGKATSVTY HHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCEEEHHH KELHARVSQFASALKGLGVKKGDRVIIYMPMTIEGVVAMQACARIGATHSVVFGGFSAKS HHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCHHH LQERIQDAGAVAVITANYQLRGGKELPLKAIVDEGIAMGGCESIKNVVVYQRTATPCNMV HHHHHHCCCEEEEEEECEEECCCCCCCHHHHHHCCCCCCCHHHHCCEEEEEECCCCHHHH AGRDSLMHEITARAAATCEPEFVGAEHPLFILYTSGSTGKPKGVQHSTGGYLLWAKLTMD CCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCEECCCCEEEEEEEEEE WTFDIQPADVFWCTADIGWITGHTYVAYGPLAAGATQVIFEGIPTYPNAGRFWQMIEKHK EEEECCCCCEEEEECCCCEEECCCEEEECCHHCCHHHHHHCCCCCCCCCHHHHHHHHHCC VTIFYTAPTAIRSLIKAAEGDEKIHPARSDLSSLRILGTVGEPINPEAWMWYYKNIGGER EEEEEECHHHHHHHHHHCCCCCCCCCCHHHHHHEEEEEECCCCCCCCCEEHEECCCCCCC CPIVDTFWQTESGGHMITPLPGATPLVPGSCTLPLPGIMAAIVDETGKDLPNGSGGLLVV CCEEEHHCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEE KRPWPSMIRGIWNDPERFKKSYFPEEMGGTMYLAGDGAVRNADNGYFRITGRIDDVLNVS ECCCHHHHHHCCCCHHHHHHHCCHHHHCCEEEEECCCCEECCCCCEEEEEECCCHHHCCC GHRMGTMEIESALVAHSTLVAEAAVVGRPDDLTGEAIVAFVVLKRSRPTGDEAKAIAKEL CCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH RDWVGKEIGPIAKPKDIRFGDNLPKTRSGKIMRRLLRGIAKGEALTQDTSTLENPAILDQ HHHHCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHH LSENL HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA