| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91787892
Identifier: 91787892
GI number: 91787892
Start: 2086491
End: 2087771
Strand: Reverse
Name: 91787892
Synonym: Bpro_2016
Alternate gene names: NA
Gene position: 2087771-2086491 (Counterclockwise)
Preceding gene: 91787893
Following gene: 91787889
Centisome position: 40.15
GC content: 67.76
Gene sequence:
>1281_bases ATGAGAGTCGCCGTTGTCGGAGCCGGATGGGCGGGCTGCGCCGCGGCCGTCGAGGCCACGCGCCTGGGTTACCAGGCCAC CCTTTTTGAAGCGTCCCGCACCGCTGGCGGGCGGGCCCGGCGTCTGGGCGGCACGGTGGCGGGCCGCTCAGTCCCGCTCG ACAACGGCCAGCACATCCTGATTGGAGCGTATGCCGAAACACTGCGCCTGATGAACGACGTGGGGGTTGACGTGAACGCC GCATTGCTGCGCCTGCCCTTGAGCATGCAGTTCCCCGATGGCAACGGCCTGCAGTTACCCCGGTGGCCGGCCCCGCTGGA TGCGCTCGCCGGCATCCTTGTGGCCCGCGGTTGGTCTTGGGCAGACAAGCTGTCGCTGCTCAAGGTGACGCTGGGCTGGA AATTCAAGGGATTTCAATGCGATGCGGGCCAGTCGGTGACCGATGTATGCCAGGGTCTGACACCCGGCGCCATGGCTTCG CTGATCGAGCCTTTATGCGTGTCGGCGCTGAACACGCCGGCGCAGCGCGCCAGCGGCCAGGTGTTTCTGCGCGTGATCCG TGATGCGCTGTTTCTGCAGAACGGCGGCTCCAACCTGCTCTTGCCCCGCAGGGATCTGAGCGCCCTGCTGCCGGATGCCG CACTGGCCTGGCTCCATGAGCAAGGCAGCCCCGCGCGGCTGGGCGCTCGCGTGCACACCATCGTCCCCCTCGGTTCAAGC TGGGTCGTCACCAGCGATAGCAGCGTCGCTTTTGATTGCGTGGTGCTTGCCTGCCCACCCCATGAGGCCGCGCGCCTGGT TGAAGGCAGTGGCGTGCCGGCGGGCGAGTGGCTCATGCAGGCGCGCGGCTTGCAGCACGAGGCCCTGACCACCGTTTATG CCCATGCGTCGGATGCGCGTCTGGCCCAGCCCATGCTGGCGCTGCCTTCGAGTGCCACGGAGCCGGCCCAATTCGTGTTC GACCGCGGCCAACTCGGTGGCCCCGCGGGCTTGCTGGCGTTCGTGATCAGCGCCAGTTCGGGCGACAGCGCCACACTGAC GCAGCAAGTGCTGGCGCAAGCAGCTCGGCAGTTGGGGCTGAATCCGCGGAACCCGCTGCAGCCGGTGCAGACGATTGTGG AAAAACGAGCGACCTTTGCCTGTACCCCCGGCGTGCAGCGACCGGGCACCGACGTCGCTCCTGGCCTGATGGCCTGCGGT GACTACATTGCCGGGCCATATCCAGCCACCCTGGAAGGCGCCGTGCGCTCCGGCCTCGAAGTGGCACGGCGCCTGCACTG A
Upstream 100 bases:
>100_bases TTTAACACGTGCTGTTCAGTCGCAACCCGTGCTCTAGCCGCCGGTGCATTCATCGCCTGAGGTCTTCGGGAAGGCCGGGA ATCTCAGGAAGGCGAGGAAC
Downstream 100 bases:
>100_bases ACCATTCCGCTTAATCCCACCAGTCCCGATCAGCGAGGCAATATTGCACAGGGGTCACGCACTTTGCGCCATGGCCCTGA CAGCCTTGAAAGCGGGGCGC
Product: amine oxidase
Products: NA
Alternate protein names: Amine Oxidase; Squalene/Phytoene Dehydrogenase; Oxidoreductase; FAD Dependent Oxidoreductase; Zeta-Carotene Desaturase; Flavin Containing Amine Oxidoreductase Family Protein
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MRVAVVGAGWAGCAAAVEATRLGYQATLFEASRTAGGRARRLGGTVAGRSVPLDNGQHILIGAYAETLRLMNDVGVDVNA ALLRLPLSMQFPDGNGLQLPRWPAPLDALAGILVARGWSWADKLSLLKVTLGWKFKGFQCDAGQSVTDVCQGLTPGAMAS LIEPLCVSALNTPAQRASGQVFLRVIRDALFLQNGGSNLLLPRRDLSALLPDAALAWLHEQGSPARLGARVHTIVPLGSS WVVTSDSSVAFDCVVLACPPHEAARLVEGSGVPAGEWLMQARGLQHEALTTVYAHASDARLAQPMLALPSSATEPAQFVF DRGQLGGPAGLLAFVISASSGDSATLTQQVLAQAARQLGLNPRNPLQPVQTIVEKRATFACTPGVQRPGTDVAPGLMACG DYIAGPYPATLEGAVRSGLEVARRLH
Sequences:
>Translated_426_residues MRVAVVGAGWAGCAAAVEATRLGYQATLFEASRTAGGRARRLGGTVAGRSVPLDNGQHILIGAYAETLRLMNDVGVDVNA ALLRLPLSMQFPDGNGLQLPRWPAPLDALAGILVARGWSWADKLSLLKVTLGWKFKGFQCDAGQSVTDVCQGLTPGAMAS LIEPLCVSALNTPAQRASGQVFLRVIRDALFLQNGGSNLLLPRRDLSALLPDAALAWLHEQGSPARLGARVHTIVPLGSS WVVTSDSSVAFDCVVLACPPHEAARLVEGSGVPAGEWLMQARGLQHEALTTVYAHASDARLAQPMLALPSSATEPAQFVF DRGQLGGPAGLLAFVISASSGDSATLTQQVLAQAARQLGLNPRNPLQPVQTIVEKRATFACTPGVQRPGTDVAPGLMACG DYIAGPYPATLEGAVRSGLEVARRLH >Mature_426_residues MRVAVVGAGWAGCAAAVEATRLGYQATLFEASRTAGGRARRLGGTVAGRSVPLDNGQHILIGAYAETLRLMNDVGVDVNA ALLRLPLSMQFPDGNGLQLPRWPAPLDALAGILVARGWSWADKLSLLKVTLGWKFKGFQCDAGQSVTDVCQGLTPGAMAS LIEPLCVSALNTPAQRASGQVFLRVIRDALFLQNGGSNLLLPRRDLSALLPDAALAWLHEQGSPARLGARVHTIVPLGSS WVVTSDSSVAFDCVVLACPPHEAARLVEGSGVPAGEWLMQARGLQHEALTTVYAHASDARLAQPMLALPSSATEPAQFVF DRGQLGGPAGLLAFVISASSGDSATLTQQVLAQAARQLGLNPRNPLQPVQTIVEKRATFACTPGVQRPGTDVAPGLMACG DYIAGPYPATLEGAVRSGLEVARRLH
Specific function: Unknown
COG id: COG2907
COG function: function code R; Predicted NAD/FAD-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44574; Mature: 44574
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVAVVGAGWAGCAAAVEATRLGYQATLFEASRTAGGRARRLGGTVAGRSVPLDNGQHIL CEEEEEECCHHHHHHHHHHHHCCCEEEEEHHHHCCCCHHHHCCCCCCCCCCCCCCCCEEE IGAYAETLRLMNDVGVDVNAALLRLPLSMQFPDGNGLQLPRWPAPLDALAGILVARGWSW EEHHHHHHHHHHHCCCCCCHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCH ADKLSLLKVTLGWKFKGFQCDAGQSVTDVCQGLTPGAMASLIEPLCVSALNTPAQRASGQ HHHHEEEEEEECCEECCEECCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHCHH VFLRVIRDALFLQNGGSNLLLPRRDLSALLPDAALAWLHEQGSPARLGARVHTIVPLGSS HHHHHHHHHHHHCCCCCCEEEECHHHHHHCCHHHHHHHHCCCCCHHHCCEEEEEEECCCC WVVTSDSSVAFDCVVLACPPHEAARLVEGSGVPAGEWLMQARGLQHEALTTVYAHASDAR EEEECCCCEEEEEEEEECCCHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCHH LAQPMLALPSSATEPAQFVFDRGQLGGPAGLLAFVISASSGDSATLTQQVLAQAARQLGL HHCHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCC NPRNPLQPVQTIVEKRATFACTPGVQRPGTDVAPGLMACGDYIAGPYPATLEGAVRSGLE CCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHH VARRLH HHHHCC >Mature Secondary Structure MRVAVVGAGWAGCAAAVEATRLGYQATLFEASRTAGGRARRLGGTVAGRSVPLDNGQHIL CEEEEEECCHHHHHHHHHHHHCCCEEEEEHHHHCCCCHHHHCCCCCCCCCCCCCCCCEEE IGAYAETLRLMNDVGVDVNAALLRLPLSMQFPDGNGLQLPRWPAPLDALAGILVARGWSW EEHHHHHHHHHHHCCCCCCHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCH ADKLSLLKVTLGWKFKGFQCDAGQSVTDVCQGLTPGAMASLIEPLCVSALNTPAQRASGQ HHHHEEEEEEECCEECCEECCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHCHH VFLRVIRDALFLQNGGSNLLLPRRDLSALLPDAALAWLHEQGSPARLGARVHTIVPLGSS HHHHHHHHHHHHCCCCCCEEEECHHHHHHCCHHHHHHHHCCCCCHHHCCEEEEEEECCCC WVVTSDSSVAFDCVVLACPPHEAARLVEGSGVPAGEWLMQARGLQHEALTTVYAHASDAR EEEECCCCEEEEEEEEECCCHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCHH LAQPMLALPSSATEPAQFVFDRGQLGGPAGLLAFVISASSGDSATLTQQVLAQAARQLGL HHCHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCC NPRNPLQPVQTIVEKRATFACTPGVQRPGTDVAPGLMACGDYIAGPYPATLEGAVRSGLE CCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHH VARRLH HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA