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The map label for this gene is ygdL [H]

Identifier: 91787864

GI number: 91787864

Start: 2055437

End: 2056291

Strand: Direct

Name: ygdL [H]

Synonym: Bpro_1988

Alternate gene names: 91787864

Gene position: 2055437-2056291 (Clockwise)

Preceding gene: 91787863

Following gene: 91787865

Centisome position: 39.53

GC content: 63.51

Gene sequence:

>855_bases
ATGACATCTGGCACTGTACTGTTTCCGCCCGACCTTGAGCGACGTTTCAGTGGCCTCGCGCGACTGTATGGCGTTGCTGG
CGCCCGGCGCATTCGTGAAGCGCATATTGTGGTGGTGGGCCTGGGCGGGGTGGGCTCGTGGGCTGCTGAAGCGGCCGCCC
GCAGCGGTGTGGCCCGCCTGACACTGATTGATTTTGACCACATCGCTGAATCCAACATCAACCGCCAGGTGCATGCGCTC
GACAGCACGCTGGGGCAGGCCAAGGTCCTGGCAATGCGCGATCGCATCGCCGCCATCCATCCCGCCTGCCAGGTGGATTG
CATCGAGGAGTTTGTCGATGAAAGCAATTGGCCAGGTCTTCTTGCGCTGGACAGCAGCTTCGACGGCAAGCAACTGGCCG
TGATCGACGCATGTGACCAGGTGAGGGCCAAAACAGCCATGGCCGCCTGGGCCATCAGGAGTCGGACCACCCTGATCAGC
GTGGGCGCCGCAGGCGGCAAGCGGCTCGCGCACCGTGTCGACATTGAAGACCTGTCGCTGGTCACGCACGACCCCTTGCT
GGCGCAGCTGCGCTACCGCCTGCGCAAGCAGCATGGCGCATCCCGCAAGGGCAAGATCGGCGTGGCCTGTGTTTTCAGCC
GTGAGCCGGTGCTGCAGCCTGCAGCCGTGAACTCGCTGGATGAGCAGGAAGACAGCAACGCAGAAGCGCTGGCAATGCAG
TGCGATGCGCCCCTGCAGGGCGTCACGCAGAGTGACGGCAGCCTCAACTGCCACGGCTATGGATCGGTTGTCAGCGTCAC
ATCCACCTTCGGGCTTTGCGCGACCGGCTGGGTACTCAGCAAAATTGCTGGGTAG

Upstream 100 bases:

>100_bases
TGTCGCACTGGCTGCCATATTGGCTGGTTGCGCGGGCGGACTGAAGTACCAGATCTGGCAGCTTGAGCGCTCGCTCTGAA
CCCCATTCCTGGCCCGCACC

Downstream 100 bases:

>100_bases
TTTGCAAAGAGCTAAAAAATGACGCTATAATTTGAGGCTGTGCTGCACTAAACGCAGCATGACCAGGAGAAATCCTCGGG
GCCTTAGCTCAGTTGGTAGA

Product: UBA/THIF-type NAD/FAD-binding fold

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MTSGTVLFPPDLERRFSGLARLYGVAGARRIREAHIVVVGLGGVGSWAAEAAARSGVARLTLIDFDHIAESNINRQVHAL
DSTLGQAKVLAMRDRIAAIHPACQVDCIEEFVDESNWPGLLALDSSFDGKQLAVIDACDQVRAKTAMAAWAIRSRTTLIS
VGAAGGKRLAHRVDIEDLSLVTHDPLLAQLRYRLRKQHGASRKGKIGVACVFSREPVLQPAAVNSLDEQEDSNAEALAMQ
CDAPLQGVTQSDGSLNCHGYGSVVSVTSTFGLCATGWVLSKIAG

Sequences:

>Translated_284_residues
MTSGTVLFPPDLERRFSGLARLYGVAGARRIREAHIVVVGLGGVGSWAAEAAARSGVARLTLIDFDHIAESNINRQVHAL
DSTLGQAKVLAMRDRIAAIHPACQVDCIEEFVDESNWPGLLALDSSFDGKQLAVIDACDQVRAKTAMAAWAIRSRTTLIS
VGAAGGKRLAHRVDIEDLSLVTHDPLLAQLRYRLRKQHGASRKGKIGVACVFSREPVLQPAAVNSLDEQEDSNAEALAMQ
CDAPLQGVTQSDGSLNCHGYGSVVSVTSTFGLCATGWVLSKIAG
>Mature_283_residues
TSGTVLFPPDLERRFSGLARLYGVAGARRIREAHIVVVGLGGVGSWAAEAAARSGVARLTLIDFDHIAESNINRQVHALD
STLGQAKVLAMRDRIAAIHPACQVDCIEEFVDESNWPGLLALDSSFDGKQLAVIDACDQVRAKTAMAAWAIRSRTTLISV
GAAGGKRLAHRVDIEDLSLVTHDPLLAQLRYRLRKQHGASRKGKIGVACVFSREPVLQPAAVNSLDEQEDSNAEALAMQC
DAPLQGVTQSDGSLNCHGYGSVVSVTSTFGLCATGWVLSKIAG

Specific function: Unknown

COG id: COG1179

COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesA/moeB/thiF family [H]

Homologues:

Organism=Escherichia coli, GI1789177, Length=272, Percent_Identity=38.9705882352941, Blast_Score=187, Evalue=5e-49,
Organism=Escherichia coli, GI1787048, Length=144, Percent_Identity=31.25, Blast_Score=78, Evalue=8e-16,
Organism=Saccharomyces cerevisiae, GI6321790, Length=278, Percent_Identity=25.8992805755396, Blast_Score=95, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6322825, Length=241, Percent_Identity=26.1410788381743, Blast_Score=71, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24582879, Length=138, Percent_Identity=25.3623188405797, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009036
- InterPro:   IPR016040
- InterPro:   IPR000594 [H]

Pfam domain/function: PF00899 ThiF [H]

EC number: NA

Molecular weight: Translated: 30224; Mature: 30093

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSGTVLFPPDLERRFSGLARLYGVAGARRIREAHIVVVGLGGVGSWAAEAAARSGVARL
CCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCHHHHHHHHHCCCEEE
TLIDFDHIAESNINRQVHALDSTLGQAKVLAMRDRIAAIHPACQVDCIEEFVDESNWPGL
EEEEHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEE
LALDSSFDGKQLAVIDACDQVRAKTAMAAWAIRSRTTLISVGAAGGKRLAHRVDIEDLSL
EEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHEECCHHHHHE
VTHDPLLAQLRYRLRKQHGASRKGKIGVACVFSREPVLQPAAVNSLDEQEDSNAEALAMQ
EECCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHCCCCCCCCCCCEEEEEE
CDAPLQGVTQSDGSLNCHGYGSVVSVTSTFGLCATGWVLSKIAG
CCCCCCCCCCCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TSGTVLFPPDLERRFSGLARLYGVAGARRIREAHIVVVGLGGVGSWAAEAAARSGVARL
CCCCEEECCCHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCHHHHHHHHHCCCEEE
TLIDFDHIAESNINRQVHALDSTLGQAKVLAMRDRIAAIHPACQVDCIEEFVDESNWPGL
EEEEHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEE
LALDSSFDGKQLAVIDACDQVRAKTAMAAWAIRSRTTLISVGAAGGKRLAHRVDIEDLSL
EEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHEECCHHHHHE
VTHDPLLAQLRYRLRKQHGASRKGKIGVACVFSREPVLQPAAVNSLDEQEDSNAEALAMQ
EECCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHCCCCCCCCCCCEEEEEE
CDAPLQGVTQSDGSLNCHGYGSVVSVTSTFGLCATGWVLSKIAG
CCCCCCCCCCCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]