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The map label for this gene is yebC [C]

Identifier: 91787843

GI number: 91787843

Start: 2035214

End: 2035945

Strand: Direct

Name: yebC [C]

Synonym: Bpro_1967

Alternate gene names: 91787843

Gene position: 2035214-2035945 (Clockwise)

Preceding gene: 91787835

Following gene: 91787844

Centisome position: 39.14

GC content: 60.38

Gene sequence:

>732_bases
GTGGCTGGTCATAGCAAATGGGCGAATATTCAACACCGTAAGGGTCGCCAGGACGAAAAACGCCAGCGCGTCTGGACGCG
CGTGATGCGGGAAATCATGGTCGCGGCCCGTATGGGTGGGGGCGACCTGGGAACCAACCCGCGACTGCGCCTGGCTGTTG
ACAAAGCCAAGGCTGCCAACATGCCGGCTGATAACGTGAAGTACGGTATCGCCAAAGCCACCGGCAGCCTGGAAGGCGTT
CACTATGAAGAAGTCCGCTATGAAGGCTACGGCTTTGGCGGGGCGGCCATCATTGTCGACTGCATGACGGACAACCGGGT
GCGCACCGTGGCGGAGGTTCGCCATGCGTTTTCCAAGCATGGCGGCCACATGGGGACCGAAGGTTCGGTGGCGTTTCAGT
TCAAGCACTGCGGCCAACTGATCTTTGCGCCGGGCACCAGCGAGGACAAGGTCATGGAAGTGGCGCTGGAAGCGGGTGCC
GACGATGTGATCACGCATGACGACGGTGCCATCGAGGTGCTGACGCCCTACACCGATTTTGAAGCCGTCAAAAAAGCGCT
GGAGGCTGCCGGGCTCAAGCCCGAGCTGGCCGAAGTCACCATGCGTGCCGACAACATGATCGAGCTGACCGGCGAAGATG
CCCGGAAGATGCAAAAGCTGCTGGATGTGCTGGAAGACCTGGACGACACGCAGGAAGTCTTTCACAATGCCGCGCTGGAC
GCATCTGAGTGA

Upstream 100 bases:

>100_bases
AGCTCATCCCGATCCGGGCTGCAGGGCCTCGCGGGGGCTATGCAGCGCTTCCTAAAAGTAAAATGATGGACGTAGATTAA
ATCAATTACGAAGGATTTCC

Downstream 100 bases:

>100_bases
CCATGGAGGGGAACATCGATACTGCGGAGCGGTTGGCTCGCATCGAAAACCTGCTGCAGGAAGGAAATCGTCTGCGCAGC
CAGGCAATGGACCTGCAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MAGHSKWANIQHRKGRQDEKRQRVWTRVMREIMVAARMGGGDLGTNPRLRLAVDKAKAANMPADNVKYGIAKATGSLEGV
HYEEVRYEGYGFGGAAIIVDCMTDNRVRTVAEVRHAFSKHGGHMGTEGSVAFQFKHCGQLIFAPGTSEDKVMEVALEAGA
DDVITHDDGAIEVLTPYTDFEAVKKALEAAGLKPELAEVTMRADNMIELTGEDARKMQKLLDVLEDLDDTQEVFHNAALD
ASE

Sequences:

>Translated_243_residues
MAGHSKWANIQHRKGRQDEKRQRVWTRVMREIMVAARMGGGDLGTNPRLRLAVDKAKAANMPADNVKYGIAKATGSLEGV
HYEEVRYEGYGFGGAAIIVDCMTDNRVRTVAEVRHAFSKHGGHMGTEGSVAFQFKHCGQLIFAPGTSEDKVMEVALEAGA
DDVITHDDGAIEVLTPYTDFEAVKKALEAAGLKPELAEVTMRADNMIELTGEDARKMQKLLDVLEDLDDTQEVFHNAALD
ASE
>Mature_242_residues
AGHSKWANIQHRKGRQDEKRQRVWTRVMREIMVAARMGGGDLGTNPRLRLAVDKAKAANMPADNVKYGIAKATGSLEGVH
YEEVRYEGYGFGGAAIIVDCMTDNRVRTVAEVRHAFSKHGGHMGTEGSVAFQFKHCGQLIFAPGTSEDKVMEVALEAGAD
DVITHDDGAIEVLTPYTDFEAVKKALEAAGLKPELAEVTMRADNMIELTGEDARKMQKLLDVLEDLDDTQEVFHNAALDA
SE

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=245, Percent_Identity=24.0816326530612, Blast_Score=92, Evalue=5e-19,
Organism=Escherichia coli, GI1788171, Length=239, Percent_Identity=53.1380753138075, Blast_Score=260, Evalue=5e-71,
Organism=Escherichia coli, GI1788294, Length=236, Percent_Identity=37.7118644067797, Blast_Score=145, Evalue=3e-36,
Organism=Caenorhabditis elegans, GI17556100, Length=248, Percent_Identity=24.5967741935484, Blast_Score=71, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6321458, Length=273, Percent_Identity=29.6703296703297, Blast_Score=103, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24583305, Length=244, Percent_Identity=25.8196721311475, Blast_Score=82, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1967_POLSJ (Q12C45)

Other databases:

- EMBL:   CP000316
- RefSeq:   YP_548795.1
- ProteinModelPortal:   Q12C45
- SMR:   Q12C45
- STRING:   Q12C45
- GeneID:   4015373
- GenomeReviews:   CP000316_GR
- KEGG:   pol:Bpro_1967
- NMPDR:   fig|296591.1.peg.2640
- eggNOG:   COG0217
- HOGENOM:   HBG715231
- OMA:   NDDVQYV
- PhylomeDB:   Q12C45
- ProtClustDB:   PRK00110
- BioCyc:   PSP296591:BPRO_1967-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 26629; Mature: 26498

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWANIQHRKGRQDEKRQRVWTRVMREIMVAARMGGGDLGTNPRLRLAVDKAKAAN
CCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECHHHCC
MPADNVKYGIAKATGSLEGVHYEEVRYEGYGFGGAAIIVDCMTDNRVRTVAEVRHAFSKH
CCCCCCHHHHHHCCCCCCCCCHHHEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHC
GGHMGTEGSVAFQFKHCGQLIFAPGTSEDKVMEVALEAGADDVITHDDGAIEVLTPYTDF
CCCCCCCCCEEEEEECCCCEEECCCCCHHHHHHHHHHCCCCCCEECCCCCEEEECCCCCH
EAVKKALEAAGLKPELAEVTMRADNMIELTGEDARKMQKLLDVLEDLDDTQEVFHNAALD
HHHHHHHHHCCCCCHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
ASE
CCC
>Mature Secondary Structure 
AGHSKWANIQHRKGRQDEKRQRVWTRVMREIMVAARMGGGDLGTNPRLRLAVDKAKAAN
CCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECHHHCC
MPADNVKYGIAKATGSLEGVHYEEVRYEGYGFGGAAIIVDCMTDNRVRTVAEVRHAFSKH
CCCCCCHHHHHHCCCCCCCCCHHHEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHC
GGHMGTEGSVAFQFKHCGQLIFAPGTSEDKVMEVALEAGADDVITHDDGAIEVLTPYTDF
CCCCCCCCCEEEEEECCCCEEECCCCCHHHHHHHHHHCCCCCCEECCCCCEEEECCCCCH
EAVKKALEAAGLKPELAEVTMRADNMIELTGEDARKMQKLLDVLEDLDDTQEVFHNAALD
HHHHHHHHHCCCCCHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
ASE
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA