| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787822
Identifier: 91787822
GI number: 91787822
Start: 2007998
End: 2008375
Strand: Direct
Name: 91787822
Synonym: Bpro_1945
Alternate gene names: NA
Gene position: 2007998-2008375 (Clockwise)
Preceding gene: 91787821
Following gene: 91787823
Centisome position: 38.61
GC content: 62.7
Gene sequence:
>378_bases ATGTCAGTTCCCTTGGTCCAGCAAATCGAAGCGCGCCAGGCTGAGCTCGGCCTGACTGACCGGCAGCTTTGCGATGCCCT CGGGTTTGAGCGCGAAATCACCCTCGTGCTGATCAAGCAGGGCACGATGAAGCTACCCATCACCAAGGTGCCGGCCCTGG CCGCGGCACTGTCGCTTGAGCCCGTCGACGTGTTCCGGGCGGCTCTTCAGGGGTCCTCGCCCGACTTGATCTCGGTCATC GAGGAGGTCTTTAACCCACTGCACCTGACCACCAGCGAGATGCGCCTGATCCGCCACCTGCGCGACCTGGCAGGAGACCG ACCAGCTGCGCCTATGGTCTTTGATGGCAAGGGCGTGATTGCCTTGGTGACCCCTTGA
Upstream 100 bases:
>100_bases GCCCGACTGTGCTCCCTATAGTGAATTGCGAGGTCTGCAACGTTGCAGACCGGTTCCCCAGTTCACAAAGGAGAAAGCAT TGTCAACAACCACGCCTACC
Downstream 100 bases:
>100_bases AACCAGGAGGGCAAGGATATGAGTTGAACTGACGCGGTTTTCCTTAGTGAAACCGAAGGACCCCGGCTGATGCAGGCGCT GCAGCTGTTAATAAGCGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MSVPLVQQIEARQAELGLTDRQLCDALGFEREITLVLIKQGTMKLPITKVPALAAALSLEPVDVFRAALQGSSPDLISVI EEVFNPLHLTTSEMRLIRHLRDLAGDRPAAPMVFDGKGVIALVTP
Sequences:
>Translated_125_residues MSVPLVQQIEARQAELGLTDRQLCDALGFEREITLVLIKQGTMKLPITKVPALAAALSLEPVDVFRAALQGSSPDLISVI EEVFNPLHLTTSEMRLIRHLRDLAGDRPAAPMVFDGKGVIALVTP >Mature_124_residues SVPLVQQIEARQAELGLTDRQLCDALGFEREITLVLIKQGTMKLPITKVPALAAALSLEPVDVFRAALQGSSPDLISVIE EVFNPLHLTTSEMRLIRHLRDLAGDRPAAPMVFDGKGVIALVTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13566; Mature: 13435
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVPLVQQIEARQAELGLTDRQLCDALGFEREITLVLIKQGTMKLPITKVPALAAALSLE CCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEECCCEECCCHHHHHHHHHHCCC PVDVFRAALQGSSPDLISVIEEVFNPLHLTTSEMRLIRHLRDLAGDRPAAPMVFDGKGVI HHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCEE ALVTP EEECC >Mature Secondary Structure SVPLVQQIEARQAELGLTDRQLCDALGFEREITLVLIKQGTMKLPITKVPALAAALSLE CCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEECCCEECCCHHHHHHHHHHCCC PVDVFRAALQGSSPDLISVIEEVFNPLHLTTSEMRLIRHLRDLAGDRPAAPMVFDGKGVI HHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCEE ALVTP EEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA