Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787800

Identifier: 91787800

GI number: 91787800

Start: 1982517

End: 1984190

Strand: Reverse

Name: 91787800

Synonym: Bpro_1923

Alternate gene names: NA

Gene position: 1984190-1982517 (Counterclockwise)

Preceding gene: 91787802

Following gene: 91787798

Centisome position: 38.16

GC content: 52.75

Gene sequence:

>1674_bases
ATGCCCAAGCGAAAAACAGCCGAATCAGTGCTCTCCGCATTTAGAAATGTGCATGGCCAGCGCTACGGCTATGAACTGGT
GAGTTATGCGGGCATGTGGAGCAAAGTCAAGGTTGTCTGCTCCCGCCATGGCGTTTTTGAGGTCACCCCCGAGCACCACT
TCAGGGGAGTCGGATGCAGCAAATGCTACTTCGATAGGCAAAAACTCACTAAAGCAGATTTCATCGCGCGTGCTGAAGTC
CATTTTGGAAATCGCTTTGGCTATGGAAGCATTGACGAGTTGCCTGCTGCTGGCGAGAAGGTTCGCATCAAATGCAAGGT
ACATGACCTGTATTTTCTACAAGAGCCTCGCAATCACAGTCGTGGTCATGTCGGTTGCCCCAAGTGCAAGTCACTAAAGC
TGTCGGGTAGCCGGAGAAGCCATGGGCAGCTCACGTCAGAGAAGGACTTGACGAACCAATTCATCCTGGATGCACAACAG
GTTCACGGCAATGCCTATGACTATAGCGAGTTCAAATATCTGACAGCGCGCACGAAAGGAAAAATCCTCTGTCCTGTTCA
TGGAGAATTTTTTCAAGCGCCAAGTAATCATCTTCGGGGAACCAAATGTCCGGCATGTGCGAAGAAGACGAAGGCCAGCG
GTAGTTTCAAACAGCGTTGCAGAGAACTAGGCATTGACTACTGGCGTGCGCTAAAAAGACGTGAAGCAGGGATGAGCGAT
GAAAAGATCTTTGCGGAAGGCTACGTGCGCGGAGACCGAGAAACCCCCACAGCGCTGACAGTGTACGGAGTAAGTTACCC
GAACATTGAGTTGGCTTGCAGGGTGCTGCTGCCGACTGCAAATCCAACGACGATCGGCCGCTGGATTCGCAGTGGTATGG
CGCCAGAAGAGGCGTTTGAACGGATACCAAATCCGGGCTACGCAGCTGGCTTGATTTATCTAGTGACGCATGTTGCAAGC
GGCAAGCGGTATGTGGGTCTAACAATACAGACGCTGGAGCGCCGATGGACTTATCACCTACAGCAAGCACGAGCTGGCCA
CGTCAGGGGTGCTGACTCCCTTCACGCTGCGATTCGTGAGCACGGATCGAACGCATTCACCATGGTTCAGATTGACAGCG
GCACGACAAAGGTGGATCTTGAACAGAAGGAGCGCCACTGGATCAACGCTTACGGCACCCTCGTCCCAGCCGGGTACAAC
ATTTCAGCCGGCGGTGTGAGTGGCGGGTCTAACCGTAAGCCTGTGACGATCGATGGACAACAGTTCCCCAGCGTTGAGGC
AGCTGTCATACAGATCTCTAAGAGCCGCGGCATCAGTCTTCACGCAGCAAAAGCTAGACTCCGGTTCGGCCGCATCGACG
TGAAGACTCCGGCAAAAAAAGGGGAAAGCCTGGTCAAGACCCCTGCGTACAAAGCCTGGAGCCGTATCGTTCATGGAGTG
CTGAATCAAAAAGCAAAGGATTACATCCCTGGCGTGGGTCTTTTCGAGCCTTGGCGAGACTTTCAAACATTCTTTAAAGA
TGTCGGTCAGCCCCCCGAGCCAGGCATGGCTTTCACCAGACTTGATAAGTCCAAGGGCTTCTTCCCAGAGAATTGCGTGT
GGCTGACCAAAAGCGAATCAAGCAGACTTAATGCAGTATTGGCTGGAGGCACTGTCAAAAAGGAAATAGGGTGA

Upstream 100 bases:

>100_bases
TGCGCTGATTCAATAAGTGGTAATTCAGTAGTGACTGACCTGGAGTTGATCTGCGGCAACGCATCTTGCATCTTCCAGAA
CTGCGGCACAAAATTCACCC

Downstream 100 bases:

>100_bases
ACGTGTTTCTGGCGCCTTGCGCTGCGAATGCACTGGTAACGATGACTCCACCGCTTGCTGAATAGATCGACATTTTCCGC
GGTGCTCATTCAGGCTCAGC

Product: excinuclease ABC subunit C

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 557; Mature: 556

Protein sequence:

>557_residues
MPKRKTAESVLSAFRNVHGQRYGYELVSYAGMWSKVKVVCSRHGVFEVTPEHHFRGVGCSKCYFDRQKLTKADFIARAEV
HFGNRFGYGSIDELPAAGEKVRIKCKVHDLYFLQEPRNHSRGHVGCPKCKSLKLSGSRRSHGQLTSEKDLTNQFILDAQQ
VHGNAYDYSEFKYLTARTKGKILCPVHGEFFQAPSNHLRGTKCPACAKKTKASGSFKQRCRELGIDYWRALKRREAGMSD
EKIFAEGYVRGDRETPTALTVYGVSYPNIELACRVLLPTANPTTIGRWIRSGMAPEEAFERIPNPGYAAGLIYLVTHVAS
GKRYVGLTIQTLERRWTYHLQQARAGHVRGADSLHAAIREHGSNAFTMVQIDSGTTKVDLEQKERHWINAYGTLVPAGYN
ISAGGVSGGSNRKPVTIDGQQFPSVEAAVIQISKSRGISLHAAKARLRFGRIDVKTPAKKGESLVKTPAYKAWSRIVHGV
LNQKAKDYIPGVGLFEPWRDFQTFFKDVGQPPEPGMAFTRLDKSKGFFPENCVWLTKSESSRLNAVLAGGTVKKEIG

Sequences:

>Translated_557_residues
MPKRKTAESVLSAFRNVHGQRYGYELVSYAGMWSKVKVVCSRHGVFEVTPEHHFRGVGCSKCYFDRQKLTKADFIARAEV
HFGNRFGYGSIDELPAAGEKVRIKCKVHDLYFLQEPRNHSRGHVGCPKCKSLKLSGSRRSHGQLTSEKDLTNQFILDAQQ
VHGNAYDYSEFKYLTARTKGKILCPVHGEFFQAPSNHLRGTKCPACAKKTKASGSFKQRCRELGIDYWRALKRREAGMSD
EKIFAEGYVRGDRETPTALTVYGVSYPNIELACRVLLPTANPTTIGRWIRSGMAPEEAFERIPNPGYAAGLIYLVTHVAS
GKRYVGLTIQTLERRWTYHLQQARAGHVRGADSLHAAIREHGSNAFTMVQIDSGTTKVDLEQKERHWINAYGTLVPAGYN
ISAGGVSGGSNRKPVTIDGQQFPSVEAAVIQISKSRGISLHAAKARLRFGRIDVKTPAKKGESLVKTPAYKAWSRIVHGV
LNQKAKDYIPGVGLFEPWRDFQTFFKDVGQPPEPGMAFTRLDKSKGFFPENCVWLTKSESSRLNAVLAGGTVKKEIG
>Mature_556_residues
PKRKTAESVLSAFRNVHGQRYGYELVSYAGMWSKVKVVCSRHGVFEVTPEHHFRGVGCSKCYFDRQKLTKADFIARAEVH
FGNRFGYGSIDELPAAGEKVRIKCKVHDLYFLQEPRNHSRGHVGCPKCKSLKLSGSRRSHGQLTSEKDLTNQFILDAQQV
HGNAYDYSEFKYLTARTKGKILCPVHGEFFQAPSNHLRGTKCPACAKKTKASGSFKQRCRELGIDYWRALKRREAGMSDE
KIFAEGYVRGDRETPTALTVYGVSYPNIELACRVLLPTANPTTIGRWIRSGMAPEEAFERIPNPGYAAGLIYLVTHVASG
KRYVGLTIQTLERRWTYHLQQARAGHVRGADSLHAAIREHGSNAFTMVQIDSGTTKVDLEQKERHWINAYGTLVPAGYNI
SAGGVSGGSNRKPVTIDGQQFPSVEAAVIQISKSRGISLHAAKARLRFGRIDVKTPAKKGESLVKTPAYKAWSRIVHGVL
NQKAKDYIPGVGLFEPWRDFQTFFKDVGQPPEPGMAFTRLDKSKGFFPENCVWLTKSESSRLNAVLAGGTVKKEIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62058; Mature: 61926

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKRKTAESVLSAFRNVHGQRYGYELVSYAGMWSKVKVVCSRHGVFEVTPEHHFRGVGCS
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCEEEECCCHHCCCCCCH
KCYFDRQKLTKADFIARAEVHFGNRFGYGSIDELPAAGEKVRIKCKVHDLYFLQEPRNHS
HHHHHHHHHHHHHHHEEEEEEECCCCCCCCHHHCCCCCCEEEEEEEEEEEEEEECCCCCC
RGHVGCPKCKSLKLSGSRRSHGQLTSEKDLTNQFILDAQQVHGNAYDYSEFKYLTARTKG
CCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCC
KILCPVHGEFFQAPSNHLRGTKCPACAKKTKASGSFKQRCRELGIDYWRALKRREAGMSD
CEEECCCCHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCC
EKIFAEGYVRGDRETPTALTVYGVSYPNIELACRVLLPTANPTTIGRWIRSGMAPEEAFE
CCEEECCEEECCCCCCCEEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHCCCCHHHHHH
RIPNPGYAAGLIYLVTHVASGKRYVGLTIQTLERRWTYHLQQARAGHVRGADSLHAAIRE
HCCCCCHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
HGSNAFTMVQIDSGTTKVDLEQKERHWINAYGTLVPAGYNISAGGVSGGSNRKPVTIDGQ
CCCCEEEEEEECCCCEEEECCHHHHHHHHHHHCEEECCCEEECCCCCCCCCCCCEEECCC
QFPSVEAAVIQISKSRGISLHAAKARLRFGRIDVKTPAKKGESLVKTPAYKAWSRIVHGV
CCCCCEEEEEEEECCCCCEEEEHHHHHEECEEEECCCHHCCCHHHCCCHHHHHHHHHHHH
LNQKAKDYIPGVGLFEPWRDFQTFFKDVGQPPEPGMAFTRLDKSKGFFPENCVWLTKSES
HHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCC
SRLNAVLAGGTVKKEIG
CCCEEEEECCCCHHCCC
>Mature Secondary Structure 
PKRKTAESVLSAFRNVHGQRYGYELVSYAGMWSKVKVVCSRHGVFEVTPEHHFRGVGCS
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCEEEECCCHHCCCCCCH
KCYFDRQKLTKADFIARAEVHFGNRFGYGSIDELPAAGEKVRIKCKVHDLYFLQEPRNHS
HHHHHHHHHHHHHHHEEEEEEECCCCCCCCHHHCCCCCCEEEEEEEEEEEEEEECCCCCC
RGHVGCPKCKSLKLSGSRRSHGQLTSEKDLTNQFILDAQQVHGNAYDYSEFKYLTARTKG
CCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCC
KILCPVHGEFFQAPSNHLRGTKCPACAKKTKASGSFKQRCRELGIDYWRALKRREAGMSD
CEEECCCCHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCC
EKIFAEGYVRGDRETPTALTVYGVSYPNIELACRVLLPTANPTTIGRWIRSGMAPEEAFE
CCEEECCEEECCCCCCCEEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHCCCCHHHHHH
RIPNPGYAAGLIYLVTHVASGKRYVGLTIQTLERRWTYHLQQARAGHVRGADSLHAAIRE
HCCCCCHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
HGSNAFTMVQIDSGTTKVDLEQKERHWINAYGTLVPAGYNISAGGVSGGSNRKPVTIDGQ
CCCCEEEEEEECCCCEEEECCHHHHHHHHHHHCEEECCCEEECCCCCCCCCCCCEEECCC
QFPSVEAAVIQISKSRGISLHAAKARLRFGRIDVKTPAKKGESLVKTPAYKAWSRIVHGV
CCCCCEEEEEEEECCCCCEEEEHHHHHEECEEEECCCHHCCCHHHCCCHHHHHHHHHHHH
LNQKAKDYIPGVGLFEPWRDFQTFFKDVGQPPEPGMAFTRLDKSKGFFPENCVWLTKSES
HHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCC
SRLNAVLAGGTVKKEIG
CCCEEEEECCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA